RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RPAP2Q8IXW5 612 aaPredicted RBP23.74■■□□□ 1.39
PCDH8-202ENST00000377942 C1orf115Q9H7X2 142 aa23.74■■□□□ 1.39
PCDH8-202ENST00000377942 FOXD4L6Q3SYB3 417 aaPredicted RBP23.74■■□□□ 1.39
PCDH8-202ENST00000377942 FOXD4L3Q6VB84 417 aaPredicted RBP23.74■■□□□ 1.39
PCDH8-202ENST00000377942 VPS37CA5D8V6 355 aaPredicted RBP23.73■■□□□ 1.39
PCDH8-202ENST00000377942 C11orf95C9JLR9 678 aaPredicted RBP23.73■■□□□ 1.39
PCDH8-202ENST00000377942 SART3Q15020 963 aaKnown RBP23.73■■□□□ 1.39
PCDH8-202ENST00000377942 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.72■■□□□ 1.39
PCDH8-202ENST00000377942 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 TTC21BQ7Z4L5 1316 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 DNAJC2Q99543 621 aaKnown RBP23.72■■□□□ 1.39
PCDH8-202ENST00000377942 UHRF1BP1LA0JNW5 1464 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 TPM2P07951 284 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 SF3B2Q13435 895 aaKnown RBP23.72■■□□□ 1.39
PCDH8-202ENST00000377942 TCEAL9Q9UHQ7 104 aa23.72■■□□□ 1.39
PCDH8-202ENST00000377942 FOXO3O43524 673 aa23.71■■□□□ 1.39
PCDH8-202ENST00000377942 MYL6BP14649 208 aa23.71■■□□□ 1.39
PCDH8-202ENST00000377942 PIP4K2BP78356 416 aa23.71■■□□□ 1.39
PCDH8-202ENST00000377942 STARD3NLO95772 234 aa23.71■■□□□ 1.39
PCDH8-202ENST00000377942 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.71■■□□□ 1.39
PCDH8-202ENST00000377942 TPM3P06753 285 aa23.7■■□□□ 1.39
PCDH8-202ENST00000377942 NUP160Q12769 1436 aa23.7■■□□□ 1.39
PCDH8-202ENST00000377942 CCDC57Q2TAC2 916 aa23.7■■□□□ 1.38
PCDH8-202ENST00000377942 TSR1Q2NL82 804 aaKnown RBP23.7■■□□□ 1.38
PCDH8-202ENST00000377942 TTC39AQ5SRH9 613 aa23.7■■□□□ 1.38
PCDH8-202ENST00000377942 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.38
PCDH8-202ENST00000377942 ALDH1L2Q3SY69 923 aa23.7■■□□□ 1.38
PCDH8-202ENST00000377942 BICD2Q8TD16 824 aa23.7■■□□□ 1.38
PCDH8-202ENST00000377942 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
PCDH8-202ENST00000377942 XBP1P17861 261 aa23.69■■□□□ 1.38
PCDH8-202ENST00000377942 SLC3A2P08195 630 aaKnown RBP23.69■■□□□ 1.38
PCDH8-202ENST00000377942 CADPS2Q86UW7 1296 aa23.69■■□□□ 1.38
PCDH8-202ENST00000377942 TCOF1Q13428 1488 aaKnown RBP23.68■■□□□ 1.38
PCDH8-202ENST00000377942 TPM1P09493 284 aa23.68■■□□□ 1.38
PCDH8-202ENST00000377942 WDR62O43379 1518 aa23.68■■□□□ 1.38
PCDH8-202ENST00000377942 RABEP1Q15276 862 aa23.68■■□□□ 1.38
PCDH8-202ENST00000377942 DUSP27Q5VZP5 1158 aa23.68■■□□□ 1.38
PCDH8-202ENST00000377942 EMILIN1Q9Y6C2 1016 aa23.67■■□□□ 1.38
PCDH8-202ENST00000377942 KLHL34Q8N239 644 aa23.67■■□□□ 1.38
PCDH8-202ENST00000377942 BRMS1Q9HCU9 246 aa23.67■■□□□ 1.38
PCDH8-202ENST00000377942 MPHOSPH8Q99549 860 aa23.67■■□□□ 1.38
PCDH8-202ENST00000377942 PTPRKQ15262 1439 aa23.66■■□□□ 1.38
PCDH8-202ENST00000377942 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
PCDH8-202ENST00000377942 PES1O00541 588 aaKnown RBP23.66■■□□□ 1.38
PCDH8-202ENST00000377942 SRGAP3O43295 1099 aa23.66■■□□□ 1.38
PCDH8-202ENST00000377942 FYB1O15117 783 aa23.65■■□□□ 1.38
PCDH8-202ENST00000377942 KRT28Q7Z3Y7 464 aa23.65■■□□□ 1.38
PCDH8-202ENST00000377942 ANKRD20A12PQ8NF67 263 aa23.65■■□□□ 1.38
PCDH8-202ENST00000377942 TRAPPC8Q9Y2L5 1435 aa23.65■■□□□ 1.38
PCDH8-202ENST00000377942 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.38
PCDH8-202ENST00000377942 ZSCAN25Q6NSZ9 544 aa23.64■■□□□ 1.38
PCDH8-202ENST00000377942 CCDC73Q6ZRK6 1079 aa23.64■■□□□ 1.38
PCDH8-202ENST00000377942 CEP126Q9P2H0 1117 aa23.64■■□□□ 1.38
PCDH8-202ENST00000377942 MCM10Q7L590 875 aa23.64■■□□□ 1.38
PCDH8-202ENST00000377942 PDCP20941 246 aa23.64■■□□□ 1.37
PCDH8-202ENST00000377942 CHD1LQ86WJ1 897 aa23.63■■□□□ 1.37
PCDH8-202ENST00000377942 TMOD3Q9NYL9 352 aa23.63■■□□□ 1.37
PCDH8-202ENST00000377942 GSE1Q14687 1217 aa23.63■■□□□ 1.37
PCDH8-202ENST00000377942 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
PCDH8-202ENST00000377942 CEP89Q96ST8 783 aa23.63■■□□□ 1.37
PCDH8-202ENST00000377942 LARP1Q6PKG0 1096 aaKnown RBP23.63■■□□□ 1.37
PCDH8-202ENST00000377942 ABCC2Q92887 1545 aa23.62■■□□□ 1.37
PCDH8-202ENST00000377942 NEK4P51957 841 aa23.62■■□□□ 1.37
PCDH8-202ENST00000377942 ACEP12821 1306 aa23.61■■□□□ 1.37
PCDH8-202ENST00000377942 TTC21AQ8NDW8 1320 aa23.61■■□□□ 1.37
PCDH8-202ENST00000377942 NACAP1Q9BZK3 213 aa23.61■■□□□ 1.37
PCDH8-202ENST00000377942 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
PCDH8-202ENST00000377942 SIL1Q9H173 461 aa23.61■■□□□ 1.37
PCDH8-202ENST00000377942 ANO8Q9HCE9 1232 aaPredicted RBP23.61■■□□□ 1.37
PCDH8-202ENST00000377942 DISP3Q9P2K9 1392 aa23.6■■□□□ 1.37
PCDH8-202ENST00000377942 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
PCDH8-202ENST00000377942 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
PCDH8-202ENST00000377942 THUMPD2Q9BTF0 503 aaKnown RBP23.6■■□□□ 1.37
PCDH8-202ENST00000377942 TMEM57Q8N5G2 664 aa23.59■■□□□ 1.37
PCDH8-202ENST00000377942 NOC3LQ8WTT2 800 aaKnown RBP23.59■■□□□ 1.37
PCDH8-202ENST00000377942 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
PCDH8-202ENST00000377942 RIMS2Q9UQ26 1411 aa23.58■■□□□ 1.37
PCDH8-202ENST00000377942 RARSP54136 660 aaKnown RBP23.58■■□□□ 1.37
PCDH8-202ENST00000377942 AACSQ86V21 672 aa23.58■■□□□ 1.37
PCDH8-202ENST00000377942 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
PCDH8-202ENST00000377942 ANKRD1Q15327 319 aa23.57■■□□□ 1.36
PCDH8-202ENST00000377942 SASS6Q6UVJ0 657 aa23.56■■□□□ 1.36
PCDH8-202ENST00000377942 SSH1Q8WYL5 1049 aa23.56■■□□□ 1.36
PCDH8-202ENST00000377942 MIS18AQ9NYP9 233 aa23.56■■□□□ 1.36
PCDH8-202ENST00000377942 DCTN1Q14203 1278 aa23.56■■□□□ 1.36
PCDH8-202ENST00000377942 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.55■■□□□ 1.36
PCDH8-202ENST00000377942 CYP46A1Q9Y6A2 500 aa23.55■■□□□ 1.36
PCDH8-202ENST00000377942 RAB11FIP3O75154 756 aa23.55■■□□□ 1.36
PCDH8-202ENST00000377942 USHBP1Q8N6Y0 703 aa23.55■■□□□ 1.36
PCDH8-202ENST00000377942 IGHMBP2P38935 993 aaKnown RBP23.54■■□□□ 1.36
PCDH8-202ENST00000377942 PRAG1Q86YV5 1406 aa23.54■■□□□ 1.36
PCDH8-202ENST00000377942 MSH6P52701 1360 aa23.54■■□□□ 1.36
PCDH8-202ENST00000377942 CCDC43Q96MW1 224 aaKnown RBP23.54■■□□□ 1.36
PCDH8-202ENST00000377942 HSP90AB3PQ58FF7 597 aa23.54■■□□□ 1.36
PCDH8-202ENST00000377942 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
PCDH8-202ENST00000377942 KIF1BPQ96EK5 621 aa23.54■■□□□ 1.36
PCDH8-202ENST00000377942 IL16Q14005 1332 aa23.53■■□□□ 1.36
PCDH8-202ENST00000377942 HYPKQ9NX55 129 aa23.53■■□□□ 1.36
PCDH8-202ENST00000377942 DBF4Q9UBU7 674 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms