RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 RTF1Q92541 710 aaKnown RBP16.01■□□□□ 0.15
SPIN1-201ENST00000375859 MIS18AQ9NYP9 233 aa16.01■□□□□ 0.15
SPIN1-201ENST00000375859 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
SPIN1-201ENST00000375859 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
SPIN1-201ENST00000375859 GNAI1P63096 354 aa16■□□□□ 0.15
SPIN1-201ENST00000375859 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
SPIN1-201ENST00000375859 IGHDP01880 384 aa15.99■□□□□ 0.15
SPIN1-201ENST00000375859 ORAI2Q96SN7 254 aa15.99■□□□□ 0.15
SPIN1-201ENST00000375859 IQSEC2Q5JU85 1478 aa15.99■□□□□ 0.15
SPIN1-201ENST00000375859 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
SPIN1-201ENST00000375859 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
SPIN1-201ENST00000375859 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.98■□□□□ 0.15
SPIN1-201ENST00000375859 MBIPQ9NS73 344 aa15.98■□□□□ 0.15
SPIN1-201ENST00000375859 ARHGAP23Q9P227 1491 aa15.98■□□□□ 0.15
SPIN1-201ENST00000375859 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
SPIN1-201ENST00000375859 SLIT1O75093 1534 aa15.97■□□□□ 0.15
SPIN1-201ENST00000375859 CEP170BQ9Y4F5 1589 aaPredicted RBP15.97■□□□□ 0.15
SPIN1-201ENST00000375859 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
SPIN1-201ENST00000375859 TRIM27P14373 513 aa15.97■□□□□ 0.15
SPIN1-201ENST00000375859 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
SPIN1-201ENST00000375859 IPO8O15397 1037 aaKnown RBP15.97■□□□□ 0.15
SPIN1-201ENST00000375859 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
SPIN1-201ENST00000375859 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
SPIN1-201ENST00000375859 KRT24Q2M2I5 525 aa15.96■□□□□ 0.15
SPIN1-201ENST00000375859 ATF7IPQ6VMQ6 1270 aa15.95■□□□□ 0.14
SPIN1-201ENST00000375859 LRRC7Q96NW7 1537 aa15.95■□□□□ 0.14
SPIN1-201ENST00000375859 MS4A1P11836 297 aa15.95■□□□□ 0.14
SPIN1-201ENST00000375859 EYA1Q99502 592 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
SPIN1-201ENST00000375859 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 C8orf58Q8NAV2 365 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 IL16Q14005 1332 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 MSH5O43196 834 aa15.94■□□□□ 0.14
SPIN1-201ENST00000375859 PTCH1Q13635 1447 aa15.93■□□□□ 0.14
SPIN1-201ENST00000375859 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
SPIN1-201ENST00000375859 CDK12Q9NYV4 1490 aaPredicted RBP15.92■□□□□ 0.14
SPIN1-201ENST00000375859 ATF3P18847 181 aa15.92■□□□□ 0.14
SPIN1-201ENST00000375859 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
SPIN1-201ENST00000375859 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
SPIN1-201ENST00000375859 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
SPIN1-201ENST00000375859 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
SPIN1-201ENST00000375859 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
SPIN1-201ENST00000375859 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
SPIN1-201ENST00000375859 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
SPIN1-201ENST00000375859 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
SPIN1-201ENST00000375859 KIF16BQ96L93 1317 aa15.91■□□□□ 0.14
SPIN1-201ENST00000375859 NPHP4O75161 1426 aaPredicted RBP15.91■□□□□ 0.14
SPIN1-201ENST00000375859 FLT4P35916 1363 aa15.91■□□□□ 0.14
SPIN1-201ENST00000375859 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
SPIN1-201ENST00000375859 HOXC9P31274 260 aa15.9■□□□□ 0.14
SPIN1-201ENST00000375859 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
SPIN1-201ENST00000375859 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
SPIN1-201ENST00000375859 VAMP4O75379 141 aa15.9■□□□□ 0.14
SPIN1-201ENST00000375859 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
SPIN1-201ENST00000375859 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
SPIN1-201ENST00000375859 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
SPIN1-201ENST00000375859 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
SPIN1-201ENST00000375859 OVOS2A0A0J9YW53 1432 aa15.89■□□□□ 0.13
SPIN1-201ENST00000375859 OVOS2Q6IE36 1432 aa15.89■□□□□ 0.13
SPIN1-201ENST00000375859 DAXXQ9UER7 740 aaPredicted RBP15.88■□□□□ 0.13
SPIN1-201ENST00000375859 PIK3R4Q99570 1358 aa15.88■□□□□ 0.13
SPIN1-201ENST00000375859 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
SPIN1-201ENST00000375859 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
SPIN1-201ENST00000375859 LRRC59Q96AG4 307 aaKnown RBP15.88■□□□□ 0.13
SPIN1-201ENST00000375859 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
SPIN1-201ENST00000375859 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
SPIN1-201ENST00000375859 SLC4A10Q6U841 1118 aa15.87■□□□□ 0.13
SPIN1-201ENST00000375859 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
SPIN1-201ENST00000375859 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
SPIN1-201ENST00000375859 ALDH1L2Q3SY69 923 aa15.85■□□□□ 0.13
SPIN1-201ENST00000375859 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
SPIN1-201ENST00000375859 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 NOP58Q9Y2X3 529 aaKnown RBP15.84■□□□□ 0.13
SPIN1-201ENST00000375859 RGPD8O14715 1765 aaPredicted RBP15.84■□□□□ 0.13
SPIN1-201ENST00000375859 ADGRB2O60241 1585 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 MRPL50Q8N5N7 158 aaKnown RBP15.84■□□□□ 0.13
SPIN1-201ENST00000375859 C19orf44Q9H6X5 657 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 APBB1O00213 710 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
SPIN1-201ENST00000375859 USP31Q70CQ4 1352 aa15.83■□□□□ 0.13
SPIN1-201ENST00000375859 SLC4A2P04920 1241 aa15.83■□□□□ 0.13
SPIN1-201ENST00000375859 ANP32EQ9BTT0 268 aa15.83■□□□□ 0.13
SPIN1-201ENST00000375859 GCP02774 474 aa15.83■□□□□ 0.12
SPIN1-201ENST00000375859 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.12
SPIN1-201ENST00000375859 NBR1Q14596 966 aa15.83■□□□□ 0.12
SPIN1-201ENST00000375859 IPO9Q96P70 1041 aaKnown RBP15.83■□□□□ 0.12
SPIN1-201ENST00000375859 MON2Q7Z3U7 1717 aa15.83■□□□□ 0.12
SPIN1-201ENST00000375859 GNAT3A8MTJ3 354 aa15.82■□□□□ 0.12
SPIN1-201ENST00000375859 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
SPIN1-201ENST00000375859 NBPF6Q5VWK0 638 aa15.82■□□□□ 0.12
SPIN1-201ENST00000375859 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
SPIN1-201ENST00000375859 NBPF4Q96M43 638 aa15.82■□□□□ 0.12
SPIN1-201ENST00000375859 ZNF853P0CG23 659 aa15.81■□□□□ 0.12
SPIN1-201ENST00000375859 EIF2S2P20042 333 aaKnown RBP15.81■□□□□ 0.12
SPIN1-201ENST00000375859 SLC4A3P48751 1232 aa15.81■□□□□ 0.12
SPIN1-201ENST00000375859 SSH2Q76I76 1423 aa15.8■□□□□ 0.12
SPIN1-201ENST00000375859 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms