RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
CLCNKA-202ENST00000375692 DLC1Q96QB1 1528 aa17.75■□□□□ 0.43
CLCNKA-202ENST00000375692 KCNA6P17658 529 aa17.75■□□□□ 0.43
CLCNKA-202ENST00000375692 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
CLCNKA-202ENST00000375692 HSPA2P54652 639 aa17.74■□□□□ 0.43
CLCNKA-202ENST00000375692 WASLO00401 505 aaPredicted RBP17.74■□□□□ 0.43
CLCNKA-202ENST00000375692 RIPK4P57078 832 aa17.74■□□□□ 0.43
CLCNKA-202ENST00000375692 TECPR2O15040 1411 aa17.73■□□□□ 0.43
CLCNKA-202ENST00000375692 USP32Q8NFA0 1604 aa17.73■□□□□ 0.43
CLCNKA-202ENST00000375692 ADGRB2O60241 1585 aa17.72■□□□□ 0.43
CLCNKA-202ENST00000375692 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
CLCNKA-202ENST00000375692 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
CLCNKA-202ENST00000375692 UBE2Q2Q8WVN8 375 aa17.72■□□□□ 0.43
CLCNKA-202ENST00000375692 FAM135BQ49AJ0 1406 aa17.71■□□□□ 0.43
CLCNKA-202ENST00000375692 NUCB1Q02818 461 aa17.71■□□□□ 0.43
CLCNKA-202ENST00000375692 NSD2O96028 1365 aa17.71■□□□□ 0.43
CLCNKA-202ENST00000375692 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
CLCNKA-202ENST00000375692 ZNF142P52746 1687 aaPredicted RBP17.7■□□□□ 0.42
CLCNKA-202ENST00000375692 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
CLCNKA-202ENST00000375692 DDIT3P35638 169 aa17.69■□□□□ 0.42
CLCNKA-202ENST00000375692 RBM25P49756 843 aaKnown RBP17.69■□□□□ 0.42
CLCNKA-202ENST00000375692 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
CLCNKA-202ENST00000375692 FYB1O15117 783 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 MRE11P49959 708 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 ATAD2Q6PL18 1390 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 CPS1P31327 1500 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 GRPEL1Q9HAV7 217 aa17.68■□□□□ 0.42
CLCNKA-202ENST00000375692 DDX11L8A8MPP1 907 aa17.67■□□□□ 0.42
CLCNKA-202ENST00000375692 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
CLCNKA-202ENST00000375692 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
CLCNKA-202ENST00000375692 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
CLCNKA-202ENST00000375692 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 FBLN1P23142 703 aa17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 ANKRD45Q5TZF3 282 aa17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 CD163L1Q9NR16 1453 aa17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 IL16Q14005 1332 aa17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
CLCNKA-202ENST00000375692 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 SNX21Q969T3 373 aa17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 KIF2CQ99661 725 aa17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 NPHP4O75161 1426 aaPredicted RBP17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 DIAPH1O60610 1272 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 CLCN1P35523 988 aa17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
CLCNKA-202ENST00000375692 KNDC1Q76NI1 1749 aa17.64■□□□□ 0.42
CLCNKA-202ENST00000375692 GAS2L3Q86XJ1 694 aa17.64■□□□□ 0.41
CLCNKA-202ENST00000375692 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
CLCNKA-202ENST00000375692 TERF2IPQ9NYB0 399 aa17.64■□□□□ 0.41
CLCNKA-202ENST00000375692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLCNKA-202ENST00000375692 THUMPD2Q9BTF0 503 aaKnown RBP17.63■□□□□ 0.41
CLCNKA-202ENST00000375692 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
CLCNKA-202ENST00000375692 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
CLCNKA-202ENST00000375692 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-202ENST00000375692 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
CLCNKA-202ENST00000375692 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
CLCNKA-202ENST00000375692 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-202ENST00000375692 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
CLCNKA-202ENST00000375692 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
CLCNKA-202ENST00000375692 ERBB4Q15303 1308 aa17.61■□□□□ 0.41
CLCNKA-202ENST00000375692 DIP2AQ14689 1571 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 RAB3GAP1Q15042 981 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 TSPYL6Q8N831 410 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
CLCNKA-202ENST00000375692 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
CLCNKA-202ENST00000375692 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
CLCNKA-202ENST00000375692 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
CLCNKA-202ENST00000375692 GBP4Q96PP9 640 aa17.59■□□□□ 0.41
CLCNKA-202ENST00000375692 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.41
CLCNKA-202ENST00000375692 ATP7BP35670 1465 aa17.58■□□□□ 0.4
CLCNKA-202ENST00000375692 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.4
CLCNKA-202ENST00000375692 HMOX1P09601 288 aa17.58■□□□□ 0.4
CLCNKA-202ENST00000375692 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.4
CLCNKA-202ENST00000375692 ESPNB1AK53 854 aa17.57■□□□□ 0.4
CLCNKA-202ENST00000375692 VAMP4O75379 141 aa17.57■□□□□ 0.4
CLCNKA-202ENST00000375692 FCHSD2O94868 740 aa17.57■□□□□ 0.4
CLCNKA-202ENST00000375692 MRPL50Q8N5N7 158 aaKnown RBP17.57■□□□□ 0.4
CLCNKA-202ENST00000375692 SSFA2P28290 1259 aa17.56■□□□□ 0.4
CLCNKA-202ENST00000375692 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
CLCNKA-202ENST00000375692 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
CLCNKA-202ENST00000375692 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 NME9Q86XW9 330 aa17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 ACEP12821 1306 aa17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 CHD2O14647 1828 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 PNPLA6Q8IY17 1366 aa17.55■□□□□ 0.4
CLCNKA-202ENST00000375692 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
CLCNKA-202ENST00000375692 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
CLCNKA-202ENST00000375692 POLKQ9UBT6 870 aa17.53■□□□□ 0.4
CLCNKA-202ENST00000375692 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
CLCNKA-202ENST00000375692 LMTK3Q96Q04 1460 aa17.53■□□□□ 0.4
CLCNKA-202ENST00000375692 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.4
CLCNKA-202ENST00000375692 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms