RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
PTPDC1-202ENST00000375360 MAP4K4O95819 1239 aaPredicted RBP21.86■■□□□ 1.09
PTPDC1-202ENST00000375360 TAF7Q15545 349 aaPredicted RBP21.86■■□□□ 1.09
PTPDC1-202ENST00000375360 SAMD9Q5K651 1589 aa21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 PER1O15534 1290 aaPredicted RBP21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 IFT57Q9NWB7 429 aa21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 TTC21BQ7Z4L5 1316 aa21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 PTMSP20962 102 aa21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 MSNP26038 577 aaKnown RBP21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
PTPDC1-202ENST00000375360 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
PTPDC1-202ENST00000375360 KIF3AQ9Y496 699 aa21.84■■□□□ 1.09
PTPDC1-202ENST00000375360 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
PTPDC1-202ENST00000375360 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
PTPDC1-202ENST00000375360 SHANK2Q9UPX8 1470 aa21.84■■□□□ 1.09
PTPDC1-202ENST00000375360 FBXW7Q969H0 707 aa21.83■■□□□ 1.09
PTPDC1-202ENST00000375360 CFAP65Q6ZU64 1925 aaKnown RBP21.83■■□□□ 1.09
PTPDC1-202ENST00000375360 GOLGA6L6A8MZA4 724 aa21.83■■□□□ 1.09
PTPDC1-202ENST00000375360 NRDCO43847 1150 aa21.83■■□□□ 1.08
PTPDC1-202ENST00000375360 KCNA6P17658 529 aa21.83■■□□□ 1.08
PTPDC1-202ENST00000375360 TRIM27P14373 513 aa21.83■■□□□ 1.08
PTPDC1-202ENST00000375360 LRRCC1Q9C099 1032 aa21.83■■□□□ 1.08
PTPDC1-202ENST00000375360 CHMP5Q9NZZ3 219 aa21.83■■□□□ 1.08
PTPDC1-202ENST00000375360 POLKQ9UBT6 870 aa21.82■■□□□ 1.08
PTPDC1-202ENST00000375360 DNMT1P26358 1616 aaKnown RBP21.82■■□□□ 1.08
PTPDC1-202ENST00000375360 VPS37CA5D8V6 355 aaPredicted RBP21.82■■□□□ 1.08
PTPDC1-202ENST00000375360 NEK4P51957 841 aa21.82■■□□□ 1.08
PTPDC1-202ENST00000375360 CNTROBQ8N137 903 aa21.82■■□□□ 1.08
PTPDC1-202ENST00000375360 FOSBP53539 338 aa21.81■■□□□ 1.08
PTPDC1-202ENST00000375360 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
PTPDC1-202ENST00000375360 RAD21O60216 631 aa21.81■■□□□ 1.08
PTPDC1-202ENST00000375360 TRDNQ13061 729 aa21.81■■□□□ 1.08
PTPDC1-202ENST00000375360 RASSF8Q8NHQ8 419 aa21.81■■□□□ 1.08
PTPDC1-202ENST00000375360 CPLX1O14810 134 aa21.8■■□□□ 1.08
PTPDC1-202ENST00000375360 ANXA1P04083 346 aa21.8■■□□□ 1.08
PTPDC1-202ENST00000375360 DDX11L8A8MPP1 907 aa21.79■■□□□ 1.08
PTPDC1-202ENST00000375360 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
PTPDC1-202ENST00000375360 NKTRP30414 1462 aaKnown RBP21.79■■□□□ 1.08
PTPDC1-202ENST00000375360 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.79■■□□□ 1.08
PTPDC1-202ENST00000375360 CCDC27Q2M243 656 aa21.79■■□□□ 1.08
PTPDC1-202ENST00000375360 SYNE3Q6ZMZ3 975 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 CADPS2Q86UW7 1296 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 SMARCA5O60264 1052 aaPredicted RBP21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 CABLES1Q8TDN4 633 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 CNNM1Q9NRU3 951 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 NSD2O96028 1365 aa21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.78■■□□□ 1.08
PTPDC1-202ENST00000375360 PPIP5K1Q6PFW1 1433 aa21.77■■□□□ 1.08
PTPDC1-202ENST00000375360 KAT6BQ8WYB5 2073 aa21.77■■□□□ 1.08
PTPDC1-202ENST00000375360 CPLX2Q6PUV4 134 aaKnown RBP21.77■■□□□ 1.08
PTPDC1-202ENST00000375360 RPAP2Q8IXW5 612 aaPredicted RBP21.77■■□□□ 1.08
PTPDC1-202ENST00000375360 KLHL34Q8N239 644 aa21.77■■□□□ 1.08
PTPDC1-202ENST00000375360 PARD3Q8TEW0 1356 aa21.76■■□□□ 1.07
PTPDC1-202ENST00000375360 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
PTPDC1-202ENST00000375360 SMC3Q9UQE7 1217 aa21.76■■□□□ 1.07
PTPDC1-202ENST00000375360 CSPP1Q1MSJ5 1256 aa21.76■■□□□ 1.07
PTPDC1-202ENST00000375360 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
PTPDC1-202ENST00000375360 CREBRFQ8IUR6 639 aa21.75■■□□□ 1.07
PTPDC1-202ENST00000375360 ANKRD24Q8TF21 1146 aa21.75■■□□□ 1.07
PTPDC1-202ENST00000375360 ALDH1L2Q3SY69 923 aa21.75■■□□□ 1.07
PTPDC1-202ENST00000375360 ATP6V1DQ9Y5K8 247 aa21.75■■□□□ 1.07
PTPDC1-202ENST00000375360 NINLQ9Y2I6 1382 aa21.75■■□□□ 1.07
PTPDC1-202ENST00000375360 NOL10Q9BSC4 688 aaKnown RBP21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 NUTM1Q86Y26 1132 aa21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 AACSQ86V21 672 aa21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 EIF4A2Q14240 407 aaKnown RBP21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 ADGRL2O95490 1459 aa21.74■■□□□ 1.07
PTPDC1-202ENST00000375360 CLSTN1O94985 981 aa21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 NFKBIBQ15653 356 aa21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 RALYLQ86SE5 291 aaKnown RBP21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 KDM4AO75164 1064 aa21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 GSE1Q14687 1217 aa21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
PTPDC1-202ENST00000375360 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
PTPDC1-202ENST00000375360 CCDC57Q2TAC2 916 aa21.72■■□□□ 1.07
PTPDC1-202ENST00000375360 ERC1Q8IUD2 1116 aa21.72■■□□□ 1.07
PTPDC1-202ENST00000375360 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
PTPDC1-202ENST00000375360 FLIIQ13045 1269 aa21.72■■□□□ 1.07
PTPDC1-202ENST00000375360 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
PTPDC1-202ENST00000375360 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
PTPDC1-202ENST00000375360 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
PTPDC1-202ENST00000375360 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
PTPDC1-202ENST00000375360 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.07
PTPDC1-202ENST00000375360 MTMR7Q9Y216 660 aa21.7■■□□□ 1.06
PTPDC1-202ENST00000375360 MARCH6O60337 910 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 MYD88Q99836 296 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 TNNQ9UQP3 1299 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 MBD5Q9P267 1494 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 KRT24Q2M2I5 525 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 VPS53Q5VIR6 699 aa21.69■■□□□ 1.06
PTPDC1-202ENST00000375360 LRRFIP2Q9Y608 721 aaKnown RBP21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 YTHDC2Q9H6S0 1430 aaKnown RBP21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 KIAA2012Q0VF49 1180 aa21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 IGHDP01880 384 aa21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 C8orf58Q8NAV2 365 aa21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms