RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 HFM1A2PYH4 1435 aa23.45■■□□□ 1.34
COL15A1-201ENST00000375001 IPO4Q8TEX9 1081 aaKnown RBP23.45■■□□□ 1.34
COL15A1-201ENST00000375001 CALCOCO1Q9P1Z2 691 aa23.45■■□□□ 1.34
COL15A1-201ENST00000375001 UBTFL1P0CB47 393 aaPredicted RBP23.44■■□□□ 1.34
COL15A1-201ENST00000375001 ME1P48163 572 aa23.44■■□□□ 1.34
COL15A1-201ENST00000375001 KRT85P78386 507 aa23.43■■□□□ 1.34
COL15A1-201ENST00000375001 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
COL15A1-201ENST00000375001 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
COL15A1-201ENST00000375001 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
COL15A1-201ENST00000375001 SYCE3A1L190 88 aa23.42■■□□□ 1.34
COL15A1-201ENST00000375001 RBM25P49756 843 aaKnown RBP23.42■■□□□ 1.34
COL15A1-201ENST00000375001 FYB1O15117 783 aa23.41■■□□□ 1.34
COL15A1-201ENST00000375001 KIAA1107Q9UPP5 1409 aa23.41■■□□□ 1.34
COL15A1-201ENST00000375001 PRKAR2BP31323 418 aa23.41■■□□□ 1.34
COL15A1-201ENST00000375001 STK3Q13188 491 aa23.41■■□□□ 1.34
COL15A1-201ENST00000375001 CBFA2T2O43439 604 aa23.4■■□□□ 1.34
COL15A1-201ENST00000375001 SURF6O75683 361 aaKnown RBP23.4■■□□□ 1.34
COL15A1-201ENST00000375001 SAMD1Q6SPF0 538 aaPredicted RBP23.4■■□□□ 1.34
COL15A1-201ENST00000375001 TICAM2Q86XR7 235 aa23.4■■□□□ 1.34
COL15A1-201ENST00000375001 CLASRPQ8N2M8 674 aaKnown RBP23.4■■□□□ 1.34
COL15A1-201ENST00000375001 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.4■■□□□ 1.34
COL15A1-201ENST00000375001 SHTN1A0MZ66 631 aa23.4■■□□□ 1.34
COL15A1-201ENST00000375001 CNKSR2Q8WXI2 1034 aa23.4■■□□□ 1.34
COL15A1-201ENST00000375001 GCC1Q96CN9 775 aa23.39■■□□□ 1.34
COL15A1-201ENST00000375001 JMYQ8N9B5 988 aa23.39■■□□□ 1.33
COL15A1-201ENST00000375001 POLR3GO15318 223 aaPredicted RBP23.39■■□□□ 1.33
COL15A1-201ENST00000375001 TXLNAP40222 546 aa23.39■■□□□ 1.33
COL15A1-201ENST00000375001 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
COL15A1-201ENST00000375001 SYCP1Q15431 976 aa23.39■■□□□ 1.33
COL15A1-201ENST00000375001 LUC7LQ9NQ29 371 aaKnown RBP23.39■■□□□ 1.33
COL15A1-201ENST00000375001 CIZ1Q9ULV3 898 aaPredicted RBP23.39■■□□□ 1.33
COL15A1-201ENST00000375001 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
COL15A1-201ENST00000375001 STK11IPQ8N1F8 1099 aa23.38■■□□□ 1.33
COL15A1-201ENST00000375001 CRACR2AQ9BSW2 395 aa23.38■■□□□ 1.33
COL15A1-201ENST00000375001 NUP62CLQ9H1M0 184 aa23.38■■□□□ 1.33
COL15A1-201ENST00000375001 CEP57L1Q8IYX8 460 aa23.38■■□□□ 1.33
COL15A1-201ENST00000375001 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
COL15A1-201ENST00000375001 PTPN14Q15678 1187 aa23.37■■□□□ 1.33
COL15A1-201ENST00000375001 TWISTNBQ3B726 338 aaPredicted RBP23.37■■□□□ 1.33
COL15A1-201ENST00000375001 LARP1BQ659C4 914 aaKnown RBP23.37■■□□□ 1.33
COL15A1-201ENST00000375001 IQCEQ6IPM2 695 aa23.37■■□□□ 1.33
COL15A1-201ENST00000375001 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.33
COL15A1-201ENST00000375001 DACH1Q9UI36 760 aa23.37■■□□□ 1.33
COL15A1-201ENST00000375001 CYP46A1Q9Y6A2 500 aa23.36■■□□□ 1.33
COL15A1-201ENST00000375001 MVPQ14764 893 aaKnown RBP23.36■■□□□ 1.33
COL15A1-201ENST00000375001 CDK5RAP3Q96JB5 506 aa23.36■■□□□ 1.33
COL15A1-201ENST00000375001 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
COL15A1-201ENST00000375001 CCAR1Q8IX12 1150 aaKnown RBP23.36■■□□□ 1.33
COL15A1-201ENST00000375001 ANKRD18AQ8IVF6 992 aa23.35■■□□□ 1.33
COL15A1-201ENST00000375001 SPATA32Q96LK8 384 aa23.35■■□□□ 1.33
COL15A1-201ENST00000375001 DNAJC2Q99543 621 aaKnown RBP23.35■■□□□ 1.33
COL15A1-201ENST00000375001 AIMP1Q12904 312 aaKnown RBP23.35■■□□□ 1.33
COL15A1-201ENST00000375001 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
COL15A1-201ENST00000375001 SART3Q15020 963 aaKnown RBP23.35■■□□□ 1.33
COL15A1-201ENST00000375001 EZRP15311 586 aaKnown RBP23.34■■□□□ 1.33
COL15A1-201ENST00000375001 ARHGAP29Q52LW3 1261 aa23.34■■□□□ 1.33
COL15A1-201ENST00000375001 C20orf194Q5TEA3 1177 aa23.34■■□□□ 1.33
COL15A1-201ENST00000375001 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
COL15A1-201ENST00000375001 ATF7IPQ6VMQ6 1270 aa23.34■■□□□ 1.33
COL15A1-201ENST00000375001 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
COL15A1-201ENST00000375001 RIC3Q7Z5B4 369 aa23.33■■□□□ 1.33
COL15A1-201ENST00000375001 GBP3Q9H0R5 595 aa23.33■■□□□ 1.33
COL15A1-201ENST00000375001 PPP4R3BQ5MIZ7 849 aa23.33■■□□□ 1.33
COL15A1-201ENST00000375001 TANGO6Q9C0B7 1094 aa23.32■■□□□ 1.32
COL15A1-201ENST00000375001 KRI1Q8N9T8 703 aaKnown RBP23.32■■□□□ 1.32
COL15A1-201ENST00000375001 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
COL15A1-201ENST00000375001 GOLGA6L10A0A0M3HER8 536 aa23.32■■□□□ 1.32
COL15A1-201ENST00000375001 WDR63Q8IWG1 891 aa23.32■■□□□ 1.32
COL15A1-201ENST00000375001 KRT18P05783 430 aaKnown RBP23.31■■□□□ 1.32
COL15A1-201ENST00000375001 GNAI3P08754 354 aa23.31■■□□□ 1.32
COL15A1-201ENST00000375001 SPDYE4A6NLX3 237 aa23.31■■□□□ 1.32
COL15A1-201ENST00000375001 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
COL15A1-201ENST00000375001 KIF18AQ8NI77 898 aa23.31■■□□□ 1.32
COL15A1-201ENST00000375001 KIF2AO00139 706 aaPredicted RBP23.31■■□□□ 1.32
COL15A1-201ENST00000375001 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
COL15A1-201ENST00000375001 TXLNBQ8N3L3 684 aa23.31■■□□□ 1.32
COL15A1-201ENST00000375001 CHD1LQ86WJ1 897 aa23.3■■□□□ 1.32
COL15A1-201ENST00000375001 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
COL15A1-201ENST00000375001 URI1O94763 535 aaPredicted RBP23.3■■□□□ 1.32
COL15A1-201ENST00000375001 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
COL15A1-201ENST00000375001 HIP1O00291 1037 aa23.29■■□□□ 1.32
COL15A1-201ENST00000375001 STIM1Q13586 685 aa23.29■■□□□ 1.32
COL15A1-201ENST00000375001 CAMK4Q16566 473 aa23.29■■□□□ 1.32
COL15A1-201ENST00000375001 MAP3K11Q16584 847 aa23.29■■□□□ 1.32
COL15A1-201ENST00000375001 CFAP100Q494V2 611 aa23.29■■□□□ 1.32
COL15A1-201ENST00000375001 RNF187Q5TA31 235 aaPredicted RBP23.28■■□□□ 1.32
COL15A1-201ENST00000375001 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
COL15A1-201ENST00000375001 CCDC148Q8NFR7 591 aa23.28■■□□□ 1.32
COL15A1-201ENST00000375001 SFPQP23246 707 aaKnown RBP eCLIP23.27■■□□□ 1.32
COL15A1-201ENST00000375001 ANKRD1Q15327 319 aa23.27■■□□□ 1.32
COL15A1-201ENST00000375001 KIAA1328Q86T90 577 aa23.27■■□□□ 1.32
COL15A1-201ENST00000375001 NAIPQ13075 1403 aa23.27■■□□□ 1.32
COL15A1-201ENST00000375001 NUTM2GQ5VZR2 741 aa23.27■■□□□ 1.32
COL15A1-201ENST00000375001 EHBP1L1Q8N3D4 1523 aa23.26■■□□□ 1.31
COL15A1-201ENST00000375001 SMTNL1A8MU46 457 aa23.26■■□□□ 1.31
COL15A1-201ENST00000375001 CFAP45Q9UL16 551 aa23.26■■□□□ 1.31
COL15A1-201ENST00000375001 TNNT1P13805 278 aa23.25■■□□□ 1.31
COL15A1-201ENST00000375001 C9orf84Q5VXU9 1444 aa23.25■■□□□ 1.31
COL15A1-201ENST00000375001 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
COL15A1-201ENST00000375001 BBXQ8WY36 941 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms