RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 EIF4A2Q14240 407 aaKnown RBP23.35■■□□□ 1.33
HLA-DQB1-201ENST00000374943 KIF1AQ12756 1690 aa23.34■■□□□ 1.33
HLA-DQB1-201ENST00000374943 FLT4P35916 1363 aa23.34■■□□□ 1.33
HLA-DQB1-201ENST00000374943 LTN1O94822 1766 aa23.33■■□□□ 1.33
HLA-DQB1-201ENST00000374943 PDE3AQ14432 1141 aa23.33■■□□□ 1.33
HLA-DQB1-201ENST00000374943 PHACTR3Q96KR7 559 aa23.33■■□□□ 1.33
HLA-DQB1-201ENST00000374943 STRCP1A6NGW2 1772 aa23.33■■□□□ 1.32
HLA-DQB1-201ENST00000374943 MAP3K19Q56UN5 1328 aa23.32■■□□□ 1.32
HLA-DQB1-201ENST00000374943 ARHGEF10O15013 1369 aa23.31■■□□□ 1.32
HLA-DQB1-201ENST00000374943 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
HLA-DQB1-201ENST00000374943 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
HLA-DQB1-201ENST00000374943 CALD1Q05682 793 aaKnown RBP23.29■■□□□ 1.32
HLA-DQB1-201ENST00000374943 NLRP6P59044 892 aa23.28■■□□□ 1.32
HLA-DQB1-201ENST00000374943 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
HLA-DQB1-201ENST00000374943 TRPM3Q9HCF6 1732 aaPredicted RBP23.28■■□□□ 1.32
HLA-DQB1-201ENST00000374943 HSP90AB2PQ58FF8 381 aa23.28■■□□□ 1.32
HLA-DQB1-201ENST00000374943 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
HLA-DQB1-201ENST00000374943 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
HLA-DQB1-201ENST00000374943 NFAT5O94916 1531 aa23.27■■□□□ 1.32
HLA-DQB1-201ENST00000374943 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
HLA-DQB1-201ENST00000374943 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
HLA-DQB1-201ENST00000374943 KDRP35968 1356 aa23.25■■□□□ 1.31
HLA-DQB1-201ENST00000374943 EXOSC9Q06265 439 aaKnown RBP23.25■■□□□ 1.31
HLA-DQB1-201ENST00000374943 ABTB2Q8N961 1025 aa23.25■■□□□ 1.31
HLA-DQB1-201ENST00000374943 SULT6B1Q6IMI4 303 aa23.24■■□□□ 1.31
HLA-DQB1-201ENST00000374943 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
HLA-DQB1-201ENST00000374943 DCCP43146 1447 aa23.24■■□□□ 1.31
HLA-DQB1-201ENST00000374943 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
HLA-DQB1-201ENST00000374943 ESCO1Q5FWF5 840 aa23.23■■□□□ 1.31
HLA-DQB1-201ENST00000374943 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
HLA-DQB1-201ENST00000374943 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 KDM2BQ8NHM5 1336 aa23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 SOX12O15370 315 aa23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 AMPHP49418 695 aa23.22■■□□□ 1.31
HLA-DQB1-201ENST00000374943 C1orf167Q5SNV9 1468 aa23.21■■□□□ 1.31
HLA-DQB1-201ENST00000374943 IGSF1Q8N6C5 1336 aa23.21■■□□□ 1.31
HLA-DQB1-201ENST00000374943 SLIT3O75094 1523 aa23.21■■□□□ 1.31
HLA-DQB1-201ENST00000374943 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
HLA-DQB1-201ENST00000374943 ILDR2Q71H61 639 aa23.21■■□□□ 1.31
HLA-DQB1-201ENST00000374943 PAK3O75914 559 aaPredicted RBP23.2■■□□□ 1.3
HLA-DQB1-201ENST00000374943 GNAI1P63096 354 aa23.2■■□□□ 1.3
HLA-DQB1-201ENST00000374943 AAMPQ13685 434 aa23.2■■□□□ 1.3
HLA-DQB1-201ENST00000374943 ZNF428Q96B54 188 aa23.19■■□□□ 1.3
HLA-DQB1-201ENST00000374943 C19orf44Q9H6X5 657 aa23.19■■□□□ 1.3
HLA-DQB1-201ENST00000374943 HOXC9P31274 260 aa23.19■■□□□ 1.3
HLA-DQB1-201ENST00000374943 PSME1Q06323 249 aa23.19■■□□□ 1.3
HLA-DQB1-201ENST00000374943 MST1RQ04912 1400 aa23.18■■□□□ 1.3
HLA-DQB1-201ENST00000374943 XIRP1Q702N8 1843 aaKnown RBP23.18■■□□□ 1.3
HLA-DQB1-201ENST00000374943 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
HLA-DQB1-201ENST00000374943 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
HLA-DQB1-201ENST00000374943 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
HLA-DQB1-201ENST00000374943 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 NUTM2GQ5VZR2 741 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 MS4A1P11836 297 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 ZKSCAN2Q63HK3 967 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 BCL2L13Q9BXK5 485 aa23.16■■□□□ 1.3
HLA-DQB1-201ENST00000374943 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
HLA-DQB1-201ENST00000374943 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
HLA-DQB1-201ENST00000374943 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
HLA-DQB1-201ENST00000374943 TMEM94Q12767 1356 aa23.14■■□□□ 1.3
HLA-DQB1-201ENST00000374943 LRRC37A3O60309 1634 aa23.14■■□□□ 1.3
HLA-DQB1-201ENST00000374943 KCNH5Q8NCM2 988 aa23.14■■□□□ 1.29
HLA-DQB1-201ENST00000374943 EYA1Q99502 592 aa23.14■■□□□ 1.29
HLA-DQB1-201ENST00000374943 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
HLA-DQB1-201ENST00000374943 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
HLA-DQB1-201ENST00000374943 COG6Q9Y2V7 657 aa23.13■■□□□ 1.29
HLA-DQB1-201ENST00000374943 KIF16BQ96L93 1317 aa23.12■■□□□ 1.29
HLA-DQB1-201ENST00000374943 CLUAP1Q96AJ1 413 aa23.12■■□□□ 1.29
HLA-DQB1-201ENST00000374943 MBIPQ9NS73 344 aa23.12■■□□□ 1.29
HLA-DQB1-201ENST00000374943 RLBP1P12271 317 aa23.11■■□□□ 1.29
HLA-DQB1-201ENST00000374943 FAM83GA6ND36 823 aa23.1■■□□□ 1.29
HLA-DQB1-201ENST00000374943 IP6K1Q92551 441 aa23.1■■□□□ 1.29
HLA-DQB1-201ENST00000374943 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
HLA-DQB1-201ENST00000374943 USP19O94966 1318 aa23.1■■□□□ 1.29
HLA-DQB1-201ENST00000374943 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
HLA-DQB1-201ENST00000374943 SOCS7O14512 581 aa23.09■■□□□ 1.29
HLA-DQB1-201ENST00000374943 FOXO3O43524 673 aa23.09■■□□□ 1.29
HLA-DQB1-201ENST00000374943 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
HLA-DQB1-201ENST00000374943 TNNQ9UQP3 1299 aa23.09■■□□□ 1.29
HLA-DQB1-201ENST00000374943 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.29
HLA-DQB1-201ENST00000374943 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.29
HLA-DQB1-201ENST00000374943 VAMP4O75379 141 aa23.08■■□□□ 1.29
HLA-DQB1-201ENST00000374943 MVPQ14764 893 aaKnown RBP23.08■■□□□ 1.29
HLA-DQB1-201ENST00000374943 CRB1P82279 1406 aa23.07■■□□□ 1.28
HLA-DQB1-201ENST00000374943 ATF3P18847 181 aa23.07■■□□□ 1.28
HLA-DQB1-201ENST00000374943 ATF7IPQ6VMQ6 1270 aa23.07■■□□□ 1.28
HLA-DQB1-201ENST00000374943 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
HLA-DQB1-201ENST00000374943 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 TRIM27P14373 513 aa23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 FTSJ3Q8IY81 847 aaKnown RBP23.06■■□□□ 1.28
HLA-DQB1-201ENST00000374943 CHL1O00533 1208 aa23.04■■□□□ 1.28
HLA-DQB1-201ENST00000374943 HTATSF1O43719 755 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms