RNA–Protein interactions for RNA: ENST00000374557.4

EPB41L4B-201, Transcript of erythrocyte membrane protein band 4.1 like 4B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L4B, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4B-201ENST00000374557 IFT57Q9NWB7 429 aa23.17■■□□□ 1.3
EPB41L4B-201ENST00000374557 ABCC1P33527 1531 aa23.17■■□□□ 1.3
EPB41L4B-201ENST00000374557 ACEP12821 1306 aa23.16■■□□□ 1.3
EPB41L4B-201ENST00000374557 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
EPB41L4B-201ENST00000374557 MEIS3Q99687 375 aa23.16■■□□□ 1.3
EPB41L4B-201ENST00000374557 MSNP26038 577 aaKnown RBP23.15■■□□□ 1.3
EPB41L4B-201ENST00000374557 RSPH6AQ9H0K4 717 aa23.15■■□□□ 1.3
EPB41L4B-201ENST00000374557 ESCO1Q5FWF5 840 aa23.15■■□□□ 1.3
EPB41L4B-201ENST00000374557 UBTFL1P0CB47 393 aaPredicted RBP23.14■■□□□ 1.29
EPB41L4B-201ENST00000374557 HDGFL1Q5TGJ6 251 aa23.14■■□□□ 1.29
EPB41L4B-201ENST00000374557 HDAC1Q13547 482 aaPredicted RBP23.14■■□□□ 1.29
EPB41L4B-201ENST00000374557 CAVIN1Q6NZI2 390 aaKnown RBP23.14■■□□□ 1.29
EPB41L4B-201ENST00000374557 NSD2O96028 1365 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 ABCC11Q96J66 1382 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 ANXA1P04083 346 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 RNF214Q8ND24 703 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 AMOTL2Q9Y2J4 779 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 NUCB1Q02818 461 aa23.13■■□□□ 1.29
EPB41L4B-201ENST00000374557 K7ELQ4 463 aaPredicted RBP23.12■■□□□ 1.29
EPB41L4B-201ENST00000374557 MPNDQ8N594 471 aa23.12■■□□□ 1.29
EPB41L4B-201ENST00000374557 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
EPB41L4B-201ENST00000374557 ZCCHC11Q5TAX3 1644 aaKnown RBP23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 PRPF40AO75400 957 aaKnown RBP23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 YEATS2Q9ULM3 1422 aa23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 OTUD7AQ8TE49 926 aaPredicted RBP23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 PANK2Q9BZ23 570 aa23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 UPF3BQ9BZI7 483 aaKnown RBP23.11■■□□□ 1.29
EPB41L4B-201ENST00000374557 GNAI2P04899 355 aa23.1■■□□□ 1.29
EPB41L4B-201ENST00000374557 SSFA2P28290 1259 aa23.1■■□□□ 1.29
EPB41L4B-201ENST00000374557 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
EPB41L4B-201ENST00000374557 LARP6Q9BRS8 491 aaKnown RBP23.1■■□□□ 1.29
EPB41L4B-201ENST00000374557 C1orf141Q5JVX7 400 aa23.1■■□□□ 1.29
EPB41L4B-201ENST00000374557 INSRP06213 1382 aa23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 SMC5Q8IY18 1101 aa23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 NUTM1Q86Y26 1132 aa23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 TRPM2O94759 1503 aa23.09■■□□□ 1.29
EPB41L4B-201ENST00000374557 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
EPB41L4B-201ENST00000374557 DDX54Q8TDD1 881 aaKnown RBP23.08■■□□□ 1.29
EPB41L4B-201ENST00000374557 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
EPB41L4B-201ENST00000374557 CLTCL1P53675 1640 aa23.07■■□□□ 1.28
EPB41L4B-201ENST00000374557 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
EPB41L4B-201ENST00000374557 ZBTB7BO15156 539 aaPredicted RBP23.07■■□□□ 1.28
EPB41L4B-201ENST00000374557 GOLGA6L4A6NEF3 574 aa23.06■■□□□ 1.28
EPB41L4B-201ENST00000374557 IQGAP3Q86VI3 1631 aa23.05■■□□□ 1.28
EPB41L4B-201ENST00000374557 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
EPB41L4B-201ENST00000374557 IL16Q14005 1332 aa23.05■■□□□ 1.28
EPB41L4B-201ENST00000374557 PLEKHF1Q96S99 279 aa23.05■■□□□ 1.28
EPB41L4B-201ENST00000374557 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
EPB41L4B-201ENST00000374557 KDM5AP29375 1690 aaKnown RBP23.04■■□□□ 1.28
EPB41L4B-201ENST00000374557 ZFYVE16Q7Z3T8 1539 aa23.04■■□□□ 1.28
EPB41L4B-201ENST00000374557 G2E3Q7L622 706 aa23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 RPAP2Q8IXW5 612 aaPredicted RBP23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 GNAI3P08754 354 aa23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 NLRP2Q9NX02 1062 aa23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 LRRCC1Q9C099 1032 aa23.03■■□□□ 1.28
EPB41L4B-201ENST00000374557 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 MRE11P49959 708 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 RABEP1Q15276 862 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 SIL1Q9H173 461 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 DTNBO60941 627 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 IL13P35225 146 aa23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 SKOR2Q2VWA4 1001 aaPredicted RBP23.02■■□□□ 1.28
EPB41L4B-201ENST00000374557 GRPEL1Q9HAV7 217 aa23.01■■□□□ 1.27
EPB41L4B-201ENST00000374557 LRRFIP2Q9Y608 721 aaKnown RBP23.01■■□□□ 1.27
EPB41L4B-201ENST00000374557 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
EPB41L4B-201ENST00000374557 ERC2O15083 957 aa23.01■■□□□ 1.27
EPB41L4B-201ENST00000374557 IFIT2P09913 472 aaKnown RBP23■■□□□ 1.27
EPB41L4B-201ENST00000374557 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
EPB41L4B-201ENST00000374557 POGZQ7Z3K3 1410 aa23■■□□□ 1.27
EPB41L4B-201ENST00000374557 NUCB2P80303 420 aa23■■□□□ 1.27
EPB41L4B-201ENST00000374557 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
EPB41L4B-201ENST00000374557 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
EPB41L4B-201ENST00000374557 SDSP20132 328 aa22.99■■□□□ 1.27
EPB41L4B-201ENST00000374557 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
EPB41L4B-201ENST00000374557 NASPP49321 788 aaPredicted RBP22.99■■□□□ 1.27
EPB41L4B-201ENST00000374557 SYNMO15061 1565 aa22.99■■□□□ 1.27
EPB41L4B-201ENST00000374557 CCT4P50991 539 aaKnown RBP22.98■■□□□ 1.27
EPB41L4B-201ENST00000374557 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
EPB41L4B-201ENST00000374557 UNC13BO14795 1591 aa22.98■■□□□ 1.27
EPB41L4B-201ENST00000374557 GNAT3A8MTJ3 354 aa22.98■■□□□ 1.27
EPB41L4B-201ENST00000374557 FLIIQ13045 1269 aa22.98■■□□□ 1.27
EPB41L4B-201ENST00000374557 VPS37CA5D8V6 355 aaPredicted RBP22.97■■□□□ 1.27
EPB41L4B-201ENST00000374557 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
EPB41L4B-201ENST00000374557 E9PCH4 1651 aa22.97■■□□□ 1.27
EPB41L4B-201ENST00000374557 USP19O94966 1318 aa22.97■■□□□ 1.27
EPB41L4B-201ENST00000374557 THEMISQ8N1K5 641 aaPredicted RBP22.97■■□□□ 1.27
EPB41L4B-201ENST00000374557 MYL6BP14649 208 aa22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 FOSBP53539 338 aa22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 XRCC6P12956 609 aaKnown RBP eCLIP22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 CWC27Q6UX04 472 aaKnown RBP22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
EPB41L4B-201ENST00000374557 TAF7Q15545 349 aaPredicted RBP22.95■■□□□ 1.26
EPB41L4B-201ENST00000374557 GDPD2Q9HCC8 539 aa22.95■■□□□ 1.26
EPB41L4B-201ENST00000374557 PTMSP20962 102 aa22.94■■□□□ 1.26
EPB41L4B-201ENST00000374557 RIC3Q7Z5B4 369 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms