RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
PHF1-202ENST00000374516 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
PHF1-202ENST00000374516 DIP2AQ14689 1571 aa21.6■■□□□ 1.05
PHF1-202ENST00000374516 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.6■■□□□ 1.05
PHF1-202ENST00000374516 LRRC7Q96NW7 1537 aa21.59■■□□□ 1.05
PHF1-202ENST00000374516 TOPAZ1Q8N9V7 1692 aa21.59■■□□□ 1.05
PHF1-202ENST00000374516 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.05
PHF1-202ENST00000374516 PANK1Q8TE04 598 aa21.58■■□□□ 1.04
PHF1-202ENST00000374516 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
PHF1-202ENST00000374516 XRN1Q8IZH2 1706 aaKnown RBP21.56■■□□□ 1.04
PHF1-202ENST00000374516 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
PHF1-202ENST00000374516 COG6Q9Y2V7 657 aa21.55■■□□□ 1.04
PHF1-202ENST00000374516 RGPD8O14715 1765 aaPredicted RBP21.55■■□□□ 1.04
PHF1-202ENST00000374516 IGHDP01880 384 aa21.55■■□□□ 1.04
PHF1-202ENST00000374516 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
PHF1-202ENST00000374516 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 THUMPD2Q9BTF0 503 aaKnown RBP21.54■■□□□ 1.04
PHF1-202ENST00000374516 PIK3R4Q99570 1358 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 NRKQ7Z2Y5 1582 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 HSP90AB2PQ58FF8 381 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
PHF1-202ENST00000374516 USP19O94966 1318 aa21.52■■□□□ 1.04
PHF1-202ENST00000374516 EIF4A2Q14240 407 aaKnown RBP21.52■■□□□ 1.04
PHF1-202ENST00000374516 NFE2L2Q16236 605 aa21.52■■□□□ 1.04
PHF1-202ENST00000374516 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
PHF1-202ENST00000374516 CLUAP1Q96AJ1 413 aa21.51■■□□□ 1.03
PHF1-202ENST00000374516 AEBP1Q8IUX7 1158 aa21.51■■□□□ 1.03
PHF1-202ENST00000374516 IL16Q14005 1332 aa21.5■■□□□ 1.03
PHF1-202ENST00000374516 RLBP1P12271 317 aa21.5■■□□□ 1.03
PHF1-202ENST00000374516 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
PHF1-202ENST00000374516 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
PHF1-202ENST00000374516 SULT6B1Q6IMI4 303 aa21.49■■□□□ 1.03
PHF1-202ENST00000374516 NLRP6P59044 892 aa21.47■■□□□ 1.03
PHF1-202ENST00000374516 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
PHF1-202ENST00000374516 MAP3K19Q56UN5 1328 aa21.47■■□□□ 1.03
PHF1-202ENST00000374516 SMC4Q9NTJ3 1288 aa21.47■■□□□ 1.03
PHF1-202ENST00000374516 ZNF142P52746 1687 aaPredicted RBP21.46■■□□□ 1.03
PHF1-202ENST00000374516 SEC24BO95487 1268 aa21.46■■□□□ 1.03
PHF1-202ENST00000374516 SSH1Q8WYL5 1049 aa21.46■■□□□ 1.03
PHF1-202ENST00000374516 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
PHF1-202ENST00000374516 CT47B1P0C2W7 299 aaPredicted RBP21.45■■□□□ 1.02
PHF1-202ENST00000374516 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
PHF1-202ENST00000374516 DCTN1Q14203 1278 aa21.44■■□□□ 1.02
PHF1-202ENST00000374516 CHD2O14647 1828 aaKnown RBP21.44■■□□□ 1.02
PHF1-202ENST00000374516 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
PHF1-202ENST00000374516 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
PHF1-202ENST00000374516 BECN1Q14457 450 aa21.43■■□□□ 1.02
PHF1-202ENST00000374516 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
PHF1-202ENST00000374516 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
PHF1-202ENST00000374516 PEAK1Q9H792 1746 aa21.43■■□□□ 1.02
PHF1-202ENST00000374516 ZKSCAN2Q63HK3 967 aa21.43■■□□□ 1.02
PHF1-202ENST00000374516 PHF8Q9UPP1 1060 aa21.43■■□□□ 1.02
PHF1-202ENST00000374516 AMPHP49418 695 aa21.42■■□□□ 1.02
PHF1-202ENST00000374516 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
PHF1-202ENST00000374516 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
PHF1-202ENST00000374516 ESCO1Q5FWF5 840 aa21.41■■□□□ 1.02
PHF1-202ENST00000374516 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
PHF1-202ENST00000374516 FTSJ3Q8IY81 847 aaKnown RBP21.4■■□□□ 1.02
PHF1-202ENST00000374516 NOB1Q9ULX3 412 aaKnown RBP21.4■■□□□ 1.02
PHF1-202ENST00000374516 PIK3C2AO00443 1686 aa21.39■■□□□ 1.01
PHF1-202ENST00000374516 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
PHF1-202ENST00000374516 DZIP1LQ8IYY4 767 aaKnown RBP21.39■■□□□ 1.01
PHF1-202ENST00000374516 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
PHF1-202ENST00000374516 TRIM27P14373 513 aa21.38■■□□□ 1.01
PHF1-202ENST00000374516 GNAI1P63096 354 aa21.38■■□□□ 1.01
PHF1-202ENST00000374516 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
PHF1-202ENST00000374516 TSPYL6Q8N831 410 aa21.38■■□□□ 1.01
PHF1-202ENST00000374516 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
PHF1-202ENST00000374516 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
PHF1-202ENST00000374516 FLT4P35916 1363 aa21.37■■□□□ 1.01
PHF1-202ENST00000374516 SLKQ9H2G2 1235 aaPredicted RBP21.37■■□□□ 1.01
PHF1-202ENST00000374516 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
PHF1-202ENST00000374516 PCDHB15Q9Y5E8 787 aa21.36■■□□□ 1.01
PHF1-202ENST00000374516 PSME1Q06323 249 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
PHF1-202ENST00000374516 CFAP44Q96MT7 982 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 MCM10Q7L590 875 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 ANTXR1Q9H6X2 564 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
PHF1-202ENST00000374516 EIF5BO60841 1220 aaKnown RBP21.34■■□□□ 1.01
PHF1-202ENST00000374516 VAMP4O75379 141 aa21.34■■□□□ 1.01
PHF1-202ENST00000374516 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
PHF1-202ENST00000374516 EYA1Q99502 592 aa21.34■■□□□ 1.01
PHF1-202ENST00000374516 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
PHF1-202ENST00000374516 VIRMAQ69YN4 1812 aaKnown RBP21.34■■□□□ 1.01
PHF1-202ENST00000374516 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
PHF1-202ENST00000374516 AAMPQ13685 434 aa21.33■■□□□ 1.01
PHF1-202ENST00000374516 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1
PHF1-202ENST00000374516 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1
PHF1-202ENST00000374516 FOXO3O43524 673 aa21.32■■□□□ 1
PHF1-202ENST00000374516 HOXC9P31274 260 aa21.32■■□□□ 1
PHF1-202ENST00000374516 PROSER2Q86WR7 435 aaPredicted RBP21.32■■□□□ 1
PHF1-202ENST00000374516 C8orf58Q8NAV2 365 aa21.32■■□□□ 1
PHF1-202ENST00000374516 ALDH1L2Q3SY69 923 aa21.32■■□□□ 1
PHF1-202ENST00000374516 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
PHF1-202ENST00000374516 UPF2Q9HAU5 1272 aaKnown RBP21.32■■□□□ 1
PHF1-202ENST00000374516 TBC1D32Q96NH3 1257 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms