RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
PTPN20-203ENST00000374342 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
PTPN20-203ENST00000374342 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.98■■□□□ 1.11
PTPN20-203ENST00000374342 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
PTPN20-203ENST00000374342 TMEM94Q12767 1356 aa21.97■■□□□ 1.11
PTPN20-203ENST00000374342 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
PTPN20-203ENST00000374342 C1orf167Q5SNV9 1468 aa21.97■■□□□ 1.11
PTPN20-203ENST00000374342 XIRP1Q702N8 1843 aaKnown RBP21.97■■□□□ 1.11
PTPN20-203ENST00000374342 PSME1Q06323 249 aa21.96■■□□□ 1.11
PTPN20-203ENST00000374342 ORAI2Q96SN7 254 aa21.96■■□□□ 1.11
PTPN20-203ENST00000374342 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
PTPN20-203ENST00000374342 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
PTPN20-203ENST00000374342 AMPHP49418 695 aa21.95■■□□□ 1.1
PTPN20-203ENST00000374342 C20orf194Q5TEA3 1177 aa21.95■■□□□ 1.1
PTPN20-203ENST00000374342 NFAT5O94916 1531 aa21.95■■□□□ 1.1
PTPN20-203ENST00000374342 BCAR3O75815 825 aa21.94■■□□□ 1.1
PTPN20-203ENST00000374342 AEBP1Q8IUX7 1158 aa21.94■■□□□ 1.1
PTPN20-203ENST00000374342 C19orf44Q9H6X5 657 aa21.94■■□□□ 1.1
PTPN20-203ENST00000374342 IL16Q14005 1332 aa21.94■■□□□ 1.1
PTPN20-203ENST00000374342 TSR2Q969E8 191 aaKnown RBP21.94■■□□□ 1.1
PTPN20-203ENST00000374342 DCCP43146 1447 aa21.93■■□□□ 1.1
PTPN20-203ENST00000374342 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
PTPN20-203ENST00000374342 SULT6B1Q6IMI4 303 aa21.93■■□□□ 1.1
PTPN20-203ENST00000374342 MST1RQ04912 1400 aa21.93■■□□□ 1.1
PTPN20-203ENST00000374342 XPCQ01831 940 aaPredicted RBP21.92■■□□□ 1.1
PTPN20-203ENST00000374342 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
PTPN20-203ENST00000374342 FOXO3O43524 673 aa21.91■■□□□ 1.1
PTPN20-203ENST00000374342 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
PTPN20-203ENST00000374342 ATF3P18847 181 aa21.9■■□□□ 1.1
PTPN20-203ENST00000374342 PHRF1Q9P1Y6 1649 aaKnown RBP21.89■■□□□ 1.1
PTPN20-203ENST00000374342 ALS2Q96Q42 1657 aa21.89■■□□□ 1.09
PTPN20-203ENST00000374342 RTL1A6NKG5 1358 aa21.89■■□□□ 1.09
PTPN20-203ENST00000374342 HOXC9P31274 260 aa21.88■■□□□ 1.09
PTPN20-203ENST00000374342 SLIT3O75094 1523 aa21.88■■□□□ 1.09
PTPN20-203ENST00000374342 CANXP27824 592 aaKnown RBP21.88■■□□□ 1.09
PTPN20-203ENST00000374342 RARSP54136 660 aaKnown RBP21.88■■□□□ 1.09
PTPN20-203ENST00000374342 LMOD3Q0VAK6 560 aa21.87■■□□□ 1.09
PTPN20-203ENST00000374342 EXOSC9Q06265 439 aaKnown RBP21.86■■□□□ 1.09
PTPN20-203ENST00000374342 THUMPD2Q9BTF0 503 aaKnown RBP21.86■■□□□ 1.09
PTPN20-203ENST00000374342 TSHZ2Q9NRE2 1034 aa21.86■■□□□ 1.09
PTPN20-203ENST00000374342 MSH6P52701 1360 aa21.85■■□□□ 1.09
PTPN20-203ENST00000374342 IGSF1Q8N6C5 1336 aa21.85■■□□□ 1.09
PTPN20-203ENST00000374342 CALD1Q05682 793 aaKnown RBP21.84■■□□□ 1.09
PTPN20-203ENST00000374342 BCL2L13Q9BXK5 485 aa21.84■■□□□ 1.09
PTPN20-203ENST00000374342 KDRP35968 1356 aa21.84■■□□□ 1.09
PTPN20-203ENST00000374342 CT47B1P0C2W7 299 aaPredicted RBP21.84■■□□□ 1.09
PTPN20-203ENST00000374342 KRT28Q7Z3Y7 464 aa21.84■■□□□ 1.09
PTPN20-203ENST00000374342 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
PTPN20-203ENST00000374342 RGPD2P0DJD1 1756 aa21.83■■□□□ 1.09
PTPN20-203ENST00000374342 LMOD2Q6P5Q4 547 aa21.83■■□□□ 1.09
PTPN20-203ENST00000374342 EYA1Q99502 592 aa21.83■■□□□ 1.09
PTPN20-203ENST00000374342 FRAT1Q92837 279 aaPredicted RBP21.82■■□□□ 1.08
PTPN20-203ENST00000374342 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
PTPN20-203ENST00000374342 KCNH5Q8NCM2 988 aa21.82■■□□□ 1.08
PTPN20-203ENST00000374342 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
PTPN20-203ENST00000374342 PLEKHG5O94827 1062 aa21.81■■□□□ 1.08
PTPN20-203ENST00000374342 CADPS2Q86UW7 1296 aa21.81■■□□□ 1.08
PTPN20-203ENST00000374342 LTV1Q96GA3 475 aaPredicted RBP21.81■■□□□ 1.08
PTPN20-203ENST00000374342 IFT57Q9NWB7 429 aa21.8■■□□□ 1.08
PTPN20-203ENST00000374342 GNAI1P63096 354 aa21.79■■□□□ 1.08
PTPN20-203ENST00000374342 USP19O94966 1318 aa21.78■■□□□ 1.08
PTPN20-203ENST00000374342 DCTN1Q14203 1278 aa21.78■■□□□ 1.08
PTPN20-203ENST00000374342 MED1Q15648 1581 aaPredicted RBP21.78■■□□□ 1.08
PTPN20-203ENST00000374342 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
PTPN20-203ENST00000374342 PDE3AQ14432 1141 aa21.78■■□□□ 1.08
PTPN20-203ENST00000374342 IP6K1Q92551 441 aa21.78■■□□□ 1.08
PTPN20-203ENST00000374342 PANK1Q8TE04 598 aa21.77■■□□□ 1.08
PTPN20-203ENST00000374342 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
PTPN20-203ENST00000374342 RGPD5Q99666 1765 aa21.77■■□□□ 1.07
PTPN20-203ENST00000374342 DDX17Q92841 729 aaKnown RBP21.76■■□□□ 1.07
PTPN20-203ENST00000374342 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
PTPN20-203ENST00000374342 LRRC37A3O60309 1634 aa21.75■■□□□ 1.07
PTPN20-203ENST00000374342 GCP02774 474 aa21.75■■□□□ 1.07
PTPN20-203ENST00000374342 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
PTPN20-203ENST00000374342 CRYBG1Q9Y4K1 1723 aa21.75■■□□□ 1.07
PTPN20-203ENST00000374342 PXDNQ92626 1479 aa21.74■■□□□ 1.07
PTPN20-203ENST00000374342 NPHP3Q7Z494 1330 aa21.74■■□□□ 1.07
PTPN20-203ENST00000374342 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
PTPN20-203ENST00000374342 SSH1Q8WYL5 1049 aa21.74■■□□□ 1.07
PTPN20-203ENST00000374342 CFAP44Q96MT7 982 aa21.74■■□□□ 1.07
PTPN20-203ENST00000374342 TNS3Q68CZ2 1445 aa21.73■■□□□ 1.07
PTPN20-203ENST00000374342 MCM10Q7L590 875 aa21.73■■□□□ 1.07
PTPN20-203ENST00000374342 USHBP1Q8N6Y0 703 aa21.73■■□□□ 1.07
PTPN20-203ENST00000374342 TNNQ9UQP3 1299 aa21.73■■□□□ 1.07
PTPN20-203ENST00000374342 COG6Q9Y2V7 657 aa21.72■■□□□ 1.07
PTPN20-203ENST00000374342 CAMTA1Q9Y6Y1 1673 aa21.72■■□□□ 1.07
PTPN20-203ENST00000374342 ARHGEF25Q86VW2 580 aa21.71■■□□□ 1.07
PTPN20-203ENST00000374342 GAS2L2Q8NHY3 880 aa21.71■■□□□ 1.07
PTPN20-203ENST00000374342 ZKSCAN2Q63HK3 967 aa21.7■■□□□ 1.07
PTPN20-203ENST00000374342 RLBP1P12271 317 aa21.7■■□□□ 1.06
PTPN20-203ENST00000374342 CLUAP1Q96AJ1 413 aa21.7■■□□□ 1.06
PTPN20-203ENST00000374342 CRB1P82279 1406 aa21.69■■□□□ 1.06
PTPN20-203ENST00000374342 ALDH1L2Q3SY69 923 aa21.68■■□□□ 1.06
PTPN20-203ENST00000374342 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
PTPN20-203ENST00000374342 KIF16BQ96L93 1317 aa21.68■■□□□ 1.06
PTPN20-203ENST00000374342 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
PTPN20-203ENST00000374342 TSPYL6Q8N831 410 aa21.67■■□□□ 1.06
PTPN20-203ENST00000374342 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
PTPN20-203ENST00000374342 ZNF428Q96B54 188 aa21.67■■□□□ 1.06
PTPN20-203ENST00000374342 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms