RNA–Protein interactions for RNA: ENST00000374222.5

UBXN11-206, Transcript of UBX domain protein 11, humanhuman

APPRIS P4 TSL 5 BASIC

Gene UBXN11, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-206ENST00000374222 RRP7AQ9Y3A4 280 aaKnown RBP18.92■□□□□ 0.62
UBXN11-206ENST00000374222 ZNF692Q9BU19 519 aaPredicted RBP18.91■□□□□ 0.62
UBXN11-206ENST00000374222 C19orf44Q9H6X5 657 aa18.91■□□□□ 0.62
UBXN11-206ENST00000374222 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
UBXN11-206ENST00000374222 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
UBXN11-206ENST00000374222 ITSN1Q15811 1721 aa18.9■□□□□ 0.62
UBXN11-206ENST00000374222 USP19O94966 1318 aa18.9■□□□□ 0.62
UBXN11-206ENST00000374222 EIF5BO60841 1220 aaKnown RBP18.9■□□□□ 0.62
UBXN11-206ENST00000374222 IGHDP01880 384 aa18.9■□□□□ 0.62
UBXN11-206ENST00000374222 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.62
UBXN11-206ENST00000374222 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
UBXN11-206ENST00000374222 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
UBXN11-206ENST00000374222 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
UBXN11-206ENST00000374222 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
UBXN11-206ENST00000374222 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
UBXN11-206ENST00000374222 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
UBXN11-206ENST00000374222 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 IL16Q14005 1332 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 ATF3P18847 181 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 NME9Q86XW9 330 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 LRRC7Q96NW7 1537 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 USP6P35125 1406 aa18.86■□□□□ 0.61
UBXN11-206ENST00000374222 GLIPR1L2Q4G1C9 344 aa18.85■□□□□ 0.61
UBXN11-206ENST00000374222 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
UBXN11-206ENST00000374222 ZRANB1Q9UGI0 708 aa18.84■□□□□ 0.61
UBXN11-206ENST00000374222 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
UBXN11-206ENST00000374222 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
UBXN11-206ENST00000374222 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
UBXN11-206ENST00000374222 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.61
UBXN11-206ENST00000374222 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
UBXN11-206ENST00000374222 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.61
UBXN11-206ENST00000374222 MSH6P52701 1360 aa18.83■□□□□ 0.6
UBXN11-206ENST00000374222 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
UBXN11-206ENST00000374222 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
UBXN11-206ENST00000374222 FBLN1P23142 703 aa18.82■□□□□ 0.6
UBXN11-206ENST00000374222 MAP2P11137 1827 aaKnown RBP18.82■□□□□ 0.6
UBXN11-206ENST00000374222 DCCP43146 1447 aa18.82■□□□□ 0.6
UBXN11-206ENST00000374222 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
UBXN11-206ENST00000374222 NRKQ7Z2Y5 1582 aa18.81■□□□□ 0.6
UBXN11-206ENST00000374222 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
UBXN11-206ENST00000374222 CADPS2Q86UW7 1296 aa18.81■□□□□ 0.6
UBXN11-206ENST00000374222 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
UBXN11-206ENST00000374222 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
UBXN11-206ENST00000374222 MST1RQ04912 1400 aa18.79■□□□□ 0.6
UBXN11-206ENST00000374222 MVPQ14764 893 aaKnown RBP18.79■□□□□ 0.6
UBXN11-206ENST00000374222 COG3Q96JB2 828 aa18.79■□□□□ 0.6
UBXN11-206ENST00000374222 FOXO3O43524 673 aa18.78■□□□□ 0.6
UBXN11-206ENST00000374222 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
UBXN11-206ENST00000374222 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
UBXN11-206ENST00000374222 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
UBXN11-206ENST00000374222 FCHSD2O94868 740 aa18.77■□□□□ 0.6
UBXN11-206ENST00000374222 SEC24BO95487 1268 aa18.77■□□□□ 0.6
UBXN11-206ENST00000374222 PSME1Q06323 249 aa18.77■□□□□ 0.6
UBXN11-206ENST00000374222 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
UBXN11-206ENST00000374222 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.6
UBXN11-206ENST00000374222 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
UBXN11-206ENST00000374222 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
UBXN11-206ENST00000374222 POLKQ9UBT6 870 aa18.76■□□□□ 0.59
UBXN11-206ENST00000374222 RLBP1P12271 317 aa18.76■□□□□ 0.59
UBXN11-206ENST00000374222 ANTXR1Q9H6X2 564 aa18.76■□□□□ 0.59
UBXN11-206ENST00000374222 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
UBXN11-206ENST00000374222 RIPK4P57078 832 aa18.74■□□□□ 0.59
UBXN11-206ENST00000374222 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
UBXN11-206ENST00000374222 EXOSC9Q06265 439 aaKnown RBP18.74■□□□□ 0.59
UBXN11-206ENST00000374222 PKNOX2Q96KN3 472 aa18.74■□□□□ 0.59
UBXN11-206ENST00000374222 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
UBXN11-206ENST00000374222 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
UBXN11-206ENST00000374222 KIF16BQ96L93 1317 aa18.73■□□□□ 0.59
UBXN11-206ENST00000374222 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-206ENST00000374222 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
UBXN11-206ENST00000374222 DDX19BQ9UMR2 479 aa18.73■□□□□ 0.59
UBXN11-206ENST00000374222 PDZRN3Q9UPQ7 1066 aa18.73■□□□□ 0.59
UBXN11-206ENST00000374222 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
UBXN11-206ENST00000374222 TSR2Q969E8 191 aaKnown RBP18.73■□□□□ 0.59
UBXN11-206ENST00000374222 OVOS2A0A0J9YW53 1432 aa18.72■□□□□ 0.59
UBXN11-206ENST00000374222 OVOS2Q6IE36 1432 aa18.72■□□□□ 0.59
UBXN11-206ENST00000374222 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
UBXN11-206ENST00000374222 EMILIN1Q9Y6C2 1016 aa18.72■□□□□ 0.59
UBXN11-206ENST00000374222 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
UBXN11-206ENST00000374222 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 KIF1AQ12756 1690 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
UBXN11-206ENST00000374222 NLRP6P59044 892 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 SLAIN2Q9P270 581 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 PIK3C2AO00443 1686 aa18.71■□□□□ 0.59
UBXN11-206ENST00000374222 ATF7IPQ6VMQ6 1270 aa18.7■□□□□ 0.58
UBXN11-206ENST00000374222 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
UBXN11-206ENST00000374222 DDX17Q92841 729 aaKnown RBP18.7■□□□□ 0.58
UBXN11-206ENST00000374222 RRS1Q15050 365 aaKnown RBP18.69■□□□□ 0.58
UBXN11-206ENST00000374222 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
UBXN11-206ENST00000374222 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
UBXN11-206ENST00000374222 LTBP4Q8N2S1 1624 aa18.69■□□□□ 0.58
UBXN11-206ENST00000374222 SOX12O15370 315 aa18.69■□□□□ 0.58
UBXN11-206ENST00000374222 TBC1D2Q9BYX2 928 aa18.69■□□□□ 0.58
UBXN11-206ENST00000374222 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
UBXN11-206ENST00000374222 TRIM27P14373 513 aa18.67■□□□□ 0.58
UBXN11-206ENST00000374222 HDAC1Q13547 482 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms