RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
HDAC8-209ENST00000373589 NEFMP07197 916 aa20.48■□□□□ 0.87
HDAC8-209ENST00000373589 IL16Q14005 1332 aa20.48■□□□□ 0.87
HDAC8-209ENST00000373589 RGPD1P0DJD0 1748 aa20.47■□□□□ 0.87
HDAC8-209ENST00000373589 PLIN1O60240 522 aa20.47■□□□□ 0.87
HDAC8-209ENST00000373589 NFE2L2Q16236 605 aa20.47■□□□□ 0.87
HDAC8-209ENST00000373589 NUTM2GQ5VZR2 741 aa20.47■□□□□ 0.87
HDAC8-209ENST00000373589 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
HDAC8-209ENST00000373589 MST1RQ04912 1400 aa20.45■□□□□ 0.87
HDAC8-209ENST00000373589 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
HDAC8-209ENST00000373589 FOXO3O43524 673 aa20.44■□□□□ 0.86
HDAC8-209ENST00000373589 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
HDAC8-209ENST00000373589 ATF3P18847 181 aa20.44■□□□□ 0.86
HDAC8-209ENST00000373589 AMPHP49418 695 aa20.44■□□□□ 0.86
HDAC8-209ENST00000373589 ARHGEF10O15013 1369 aa20.43■□□□□ 0.86
HDAC8-209ENST00000373589 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
HDAC8-209ENST00000373589 SULT6B1Q6IMI4 303 aa20.42■□□□□ 0.86
HDAC8-209ENST00000373589 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
HDAC8-209ENST00000373589 NFAT5O94916 1531 aa20.42■□□□□ 0.86
HDAC8-209ENST00000373589 HOXC9P31274 260 aa20.41■□□□□ 0.86
HDAC8-209ENST00000373589 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.41■□□□□ 0.86
HDAC8-209ENST00000373589 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
HDAC8-209ENST00000373589 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
HDAC8-209ENST00000373589 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
HDAC8-209ENST00000373589 BCAR3O75815 825 aa20.4■□□□□ 0.86
HDAC8-209ENST00000373589 CADPS2Q86UW7 1296 aa20.4■□□□□ 0.86
HDAC8-209ENST00000373589 C20orf194Q5TEA3 1177 aa20.39■□□□□ 0.86
HDAC8-209ENST00000373589 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.86
HDAC8-209ENST00000373589 KDRP35968 1356 aa20.39■□□□□ 0.85
HDAC8-209ENST00000373589 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
HDAC8-209ENST00000373589 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
HDAC8-209ENST00000373589 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
HDAC8-209ENST00000373589 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
HDAC8-209ENST00000373589 XPCQ01831 940 aaPredicted RBP20.38■□□□□ 0.85
HDAC8-209ENST00000373589 TSR2Q969E8 191 aaKnown RBP20.38■□□□□ 0.85
HDAC8-209ENST00000373589 MSH6P52701 1360 aa20.38■□□□□ 0.85
HDAC8-209ENST00000373589 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
HDAC8-209ENST00000373589 CRBNQ96SW2 442 aa20.37■□□□□ 0.85
HDAC8-209ENST00000373589 EYA1Q99502 592 aa20.37■□□□□ 0.85
HDAC8-209ENST00000373589 SLIT3O75094 1523 aa20.37■□□□□ 0.85
HDAC8-209ENST00000373589 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
HDAC8-209ENST00000373589 CCDC136Q96JN2 1154 aa20.36■□□□□ 0.85
HDAC8-209ENST00000373589 USP19O94966 1318 aa20.36■□□□□ 0.85
HDAC8-209ENST00000373589 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
HDAC8-209ENST00000373589 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
HDAC8-209ENST00000373589 IP6K1Q92551 441 aa20.35■□□□□ 0.85
HDAC8-209ENST00000373589 DLG5Q8TDM6 1919 aa20.34■□□□□ 0.85
HDAC8-209ENST00000373589 LTN1O94822 1766 aa20.34■□□□□ 0.85
HDAC8-209ENST00000373589 ZNF335Q9H4Z2 1342 aaPredicted RBP20.33■□□□□ 0.85
HDAC8-209ENST00000373589 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.85
HDAC8-209ENST00000373589 GCP02774 474 aa20.33■□□□□ 0.84
HDAC8-209ENST00000373589 ZNF853P0CG23 659 aa20.33■□□□□ 0.84
HDAC8-209ENST00000373589 ALS2Q96Q42 1657 aa20.32■□□□□ 0.84
HDAC8-209ENST00000373589 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
HDAC8-209ENST00000373589 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
HDAC8-209ENST00000373589 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
HDAC8-209ENST00000373589 ARHGEF25Q86VW2 580 aa20.3■□□□□ 0.84
HDAC8-209ENST00000373589 NPHP3Q7Z494 1330 aa20.3■□□□□ 0.84
HDAC8-209ENST00000373589 GNAI1P63096 354 aa20.3■□□□□ 0.84
HDAC8-209ENST00000373589 FAM83GA6ND36 823 aa20.29■□□□□ 0.84
HDAC8-209ENST00000373589 LMOD2Q6P5Q4 547 aa20.28■□□□□ 0.84
HDAC8-209ENST00000373589 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
HDAC8-209ENST00000373589 DDX17Q92841 729 aaKnown RBP20.27■□□□□ 0.84
HDAC8-209ENST00000373589 MTHFSDQ2M296 383 aaKnown RBP20.27■□□□□ 0.83
HDAC8-209ENST00000373589 PXDNQ92626 1479 aa20.27■□□□□ 0.83
HDAC8-209ENST00000373589 MED1Q15648 1581 aaPredicted RBP20.26■□□□□ 0.83
HDAC8-209ENST00000373589 DCTN1Q14203 1278 aa20.26■□□□□ 0.83
HDAC8-209ENST00000373589 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
HDAC8-209ENST00000373589 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
HDAC8-209ENST00000373589 BRINP3Q76B58 766 aa20.25■□□□□ 0.83
HDAC8-209ENST00000373589 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
HDAC8-209ENST00000373589 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
HDAC8-209ENST00000373589 GAS2L2Q8NHY3 880 aa20.24■□□□□ 0.83
HDAC8-209ENST00000373589 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
HDAC8-209ENST00000373589 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
HDAC8-209ENST00000373589 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
HDAC8-209ENST00000373589 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
HDAC8-209ENST00000373589 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
HDAC8-209ENST00000373589 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
HDAC8-209ENST00000373589 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 SLAIN2Q9P270 581 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 CRB1P82279 1406 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 MCM10Q7L590 875 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
HDAC8-209ENST00000373589 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
HDAC8-209ENST00000373589 ZBTB7CA1YPR0 619 aa20.21■□□□□ 0.83
HDAC8-209ENST00000373589 HTATSF1O43719 755 aaKnown RBP20.21■□□□□ 0.83
HDAC8-209ENST00000373589 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
HDAC8-209ENST00000373589 CHL1O00533 1208 aa20.2■□□□□ 0.82
HDAC8-209ENST00000373589 VAMP4O75379 141 aa20.2■□□□□ 0.82
HDAC8-209ENST00000373589 BRPF1P55201 1214 aaPredicted RBP20.19■□□□□ 0.82
HDAC8-209ENST00000373589 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
HDAC8-209ENST00000373589 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
HDAC8-209ENST00000373589 AXIN2Q9Y2T1 843 aa20.19■□□□□ 0.82
HDAC8-209ENST00000373589 PLEKHG5O94827 1062 aa20.19■□□□□ 0.82
HDAC8-209ENST00000373589 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
HDAC8-209ENST00000373589 RLBP1P12271 317 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms