RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
GARNL3-202ENST00000373387 EDC4Q6P2E9 1401 aaKnown RBP9.43□□□□□ -0.9
GARNL3-202ENST00000373387 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
GARNL3-202ENST00000373387 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
GARNL3-202ENST00000373387 TECPR2O15040 1411 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 AK9Q5TCS8 1911 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 ATP10DQ9P241 1426 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 RAPGEF3O95398 923 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 RAB3GAP1Q15042 981 aa9.42□□□□□ -0.9
GARNL3-202ENST00000373387 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-202ENST00000373387 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-202ENST00000373387 IPO8O15397 1037 aaKnown RBP9.42□□□□□ -0.9
GARNL3-202ENST00000373387 PNNQ9H307 717 aaKnown RBP9.42□□□□□ -0.9
GARNL3-202ENST00000373387 TRAK2O60296 914 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 IL13P35225 146 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 ISY1Q9ULR0 285 aaKnown RBP9.41□□□□□ -0.9
GARNL3-202ENST00000373387 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
GARNL3-202ENST00000373387 CD2BP2O95400 341 aaKnown RBP9.41□□□□□ -0.9
GARNL3-202ENST00000373387 PHACTR3Q96KR7 559 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
GARNL3-202ENST00000373387 NFE2L2Q16236 605 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 CDK19Q9BWU1 502 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 PANK2Q9BZ23 570 aa9.41□□□□□ -0.9
GARNL3-202ENST00000373387 IFT57Q9NWB7 429 aa9.4□□□□□ -0.9
GARNL3-202ENST00000373387 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-202ENST00000373387 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
GARNL3-202ENST00000373387 FAM208AQ9UK61 1670 aaKnown RBP9.4□□□□□ -0.9
GARNL3-202ENST00000373387 RIMS2Q9UQ26 1411 aa9.4□□□□□ -0.9
GARNL3-202ENST00000373387 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.9
GARNL3-202ENST00000373387 GOLGA6L3A6NEY3 463 aa9.4□□□□□ -0.91
GARNL3-202ENST00000373387 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.91
GARNL3-202ENST00000373387 TSPYL6Q8N831 410 aa9.4□□□□□ -0.91
GARNL3-202ENST00000373387 RIMS1Q86UR5 1692 aaKnown RBP9.4□□□□□ -0.91
GARNL3-202ENST00000373387 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
GARNL3-202ENST00000373387 TNPO1Q92973 898 aaKnown RBP9.39□□□□□ -0.91
GARNL3-202ENST00000373387 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
GARNL3-202ENST00000373387 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-202ENST00000373387 IBTKQ9P2D0 1353 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-202ENST00000373387 PRKAR2BP31323 418 aa9.39□□□□□ -0.91
GARNL3-202ENST00000373387 CLCN1P35523 988 aa9.39□□□□□ -0.91
GARNL3-202ENST00000373387 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
GARNL3-202ENST00000373387 SAFB2Q14151 953 aaKnown RBP eCLIP9.39□□□□□ -0.91
GARNL3-202ENST00000373387 LNPKQ9C0E8 428 aa9.39□□□□□ -0.91
GARNL3-202ENST00000373387 UBR1Q8IWV7 1749 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 MRE11P49959 708 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-202ENST00000373387 MBIPQ9NS73 344 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 GSPT1P15170 499 aaKnown RBP9.38□□□□□ -0.91
GARNL3-202ENST00000373387 STK26Q9P289 416 aa9.38□□□□□ -0.91
GARNL3-202ENST00000373387 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
GARNL3-202ENST00000373387 CACNA1FO60840 1977 aa9.37□□□□□ -0.91
GARNL3-202ENST00000373387 CYP2E1P05181 493 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-202ENST00000373387 GAS2L3Q86XJ1 694 aa9.37□□□□□ -0.91
GARNL3-202ENST00000373387 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
GARNL3-202ENST00000373387 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 FBLN1P23142 703 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 GNAI1P63096 354 aa9.36□□□□□ -0.91
GARNL3-202ENST00000373387 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 CRYBG1Q9Y4K1 1723 aa9.35□□□□□ -0.91
GARNL3-202ENST00000373387 K7ELQ4 463 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
GARNL3-202ENST00000373387 C8orf58Q8NAV2 365 aa9.35□□□□□ -0.91
GARNL3-202ENST00000373387 CHMP4BQ9H444 224 aaKnown RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
GARNL3-202ENST00000373387 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 UBE2Q2Q8WVN8 375 aa9.35□□□□□ -0.91
GARNL3-202ENST00000373387 THUMPD2Q9BTF0 503 aaKnown RBP9.35□□□□□ -0.91
GARNL3-202ENST00000373387 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
GARNL3-202ENST00000373387 SIRT1Q96EB6 747 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 GAS2L2Q8NHY3 880 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 PPP6R1Q9UPN7 881 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 CRB1P82279 1406 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 SSH2Q76I76 1423 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 METP08581 1390 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
GARNL3-202ENST00000373387 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
GARNL3-202ENST00000373387 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
GARNL3-202ENST00000373387 TWISTNBQ3B726 338 aaPredicted RBP9.33□□□□□ -0.92
GARNL3-202ENST00000373387 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
GARNL3-202ENST00000373387 CDC45O75419 566 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 PTMSP20962 102 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 SKOR2Q2VWA4 1001 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-202ENST00000373387 WAPLQ7Z5K2 1190 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-202ENST00000373387 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 WASLO00401 505 aaPredicted RBP9.32□□□□□ -0.92
GARNL3-202ENST00000373387 HMOX1P09601 288 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 NME9Q86XW9 330 aa9.32□□□□□ -0.92
GARNL3-202ENST00000373387 ANKRD44Q8N8A2 993 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms