RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
CDK9-201ENST00000373264 ZBTB40Q9NUA8 1239 aa30.3■■■□□ 2.44
CDK9-201ENST00000373264 KNDC1Q76NI1 1749 aa30.29■■■□□ 2.44
CDK9-201ENST00000373264 VAMP4O75379 141 aa30.29■■■□□ 2.44
CDK9-201ENST00000373264 HDGFP51858 240 aaKnown RBP30.29■■■□□ 2.44
CDK9-201ENST00000373264 NFKBIBQ15653 356 aa30.28■■■□□ 2.44
CDK9-201ENST00000373264 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.28■■■□□ 2.44
CDK9-201ENST00000373264 AATKQ6ZMQ8 1374 aa30.28■■■□□ 2.44
CDK9-201ENST00000373264 KIF16BQ96L93 1317 aa30.27■■■□□ 2.44
CDK9-201ENST00000373264 C3P01024 1663 aa30.26■■■□□ 2.44
CDK9-201ENST00000373264 ACEP12821 1306 aa30.26■■■□□ 2.43
CDK9-201ENST00000373264 AKAP12Q02952 1782 aa30.25■■■□□ 2.43
CDK9-201ENST00000373264 DLG5Q8TDM6 1919 aa30.25■■■□□ 2.43
CDK9-201ENST00000373264 HDAC1Q13547 482 aaPredicted RBP30.25■■■□□ 2.43
CDK9-201ENST00000373264 ALDH1L2Q3SY69 923 aa30.25■■■□□ 2.43
CDK9-201ENST00000373264 SIRT1Q96EB6 747 aa30.25■■■□□ 2.43
CDK9-201ENST00000373264 C1orf115Q9H7X2 142 aa30.24■■■□□ 2.43
CDK9-201ENST00000373264 ITSN1Q15811 1721 aa30.24■■■□□ 2.43
CDK9-201ENST00000373264 C8orf58Q8NAV2 365 aa30.24■■■□□ 2.43
CDK9-201ENST00000373264 IPO8O15397 1037 aaKnown RBP30.23■■■□□ 2.43
CDK9-201ENST00000373264 MRPL50Q8N5N7 158 aaKnown RBP30.22■■■□□ 2.43
CDK9-201ENST00000373264 TTC21BQ7Z4L5 1316 aa30.22■■■□□ 2.43
CDK9-201ENST00000373264 ZNF853P0CG23 659 aa30.22■■■□□ 2.43
CDK9-201ENST00000373264 PTPRUQ92729 1446 aa30.22■■■□□ 2.43
CDK9-201ENST00000373264 EIF4A2Q14240 407 aaKnown RBP30.21■■■□□ 2.43
CDK9-201ENST00000373264 ZNF692Q9BU19 519 aaPredicted RBP30.2■■■□□ 2.43
CDK9-201ENST00000373264 IFT57Q9NWB7 429 aa30.2■■■□□ 2.43
CDK9-201ENST00000373264 SULT6B1Q6IMI4 303 aa30.2■■■□□ 2.42
CDK9-201ENST00000373264 USP35Q9P2H5 1018 aa30.2■■■□□ 2.42
CDK9-201ENST00000373264 GNAI1P63096 354 aa30.19■■■□□ 2.42
CDK9-201ENST00000373264 HSP90AB2PQ58FF8 381 aa30.19■■■□□ 2.42
CDK9-201ENST00000373264 SMC5Q8IY18 1101 aa30.19■■■□□ 2.42
CDK9-201ENST00000373264 KRT24Q2M2I5 525 aa30.18■■■□□ 2.42
CDK9-201ENST00000373264 TWISTNBQ3B726 338 aaPredicted RBP30.17■■■□□ 2.42
CDK9-201ENST00000373264 TBC1D32Q96NH3 1257 aa30.16■■■□□ 2.42
CDK9-201ENST00000373264 LNPKQ9C0E8 428 aa30.16■■■□□ 2.42
CDK9-201ENST00000373264 FRAT2O75474 233 aaPredicted RBP30.15■■■□□ 2.42
CDK9-201ENST00000373264 CFAP44Q96MT7 982 aa30.15■■■□□ 2.42
CDK9-201ENST00000373264 PLEKHG1Q9ULL1 1385 aa30.15■■■□□ 2.42
CDK9-201ENST00000373264 ZBTB7BO15156 539 aaPredicted RBP30.14■■■□□ 2.42
CDK9-201ENST00000373264 MCM10Q7L590 875 aa30.13■■■□□ 2.41
CDK9-201ENST00000373264 CALD1Q05682 793 aaKnown RBP30.13■■■□□ 2.41
CDK9-201ENST00000373264 SLKQ9H2G2 1235 aaPredicted RBP30.13■■■□□ 2.41
CDK9-201ENST00000373264 AMOTL2Q9Y2J4 779 aa30.13■■■□□ 2.41
CDK9-201ENST00000373264 MFAP1P55081 439 aaKnown RBP30.12■■■□□ 2.41
CDK9-201ENST00000373264 BRPF1P55201 1214 aaPredicted RBP30.12■■■□□ 2.41
CDK9-201ENST00000373264 NRKQ7Z2Y5 1582 aa30.11■■■□□ 2.41
CDK9-201ENST00000373264 USP6P35125 1406 aa30.11■■■□□ 2.41
CDK9-201ENST00000373264 PEAK1Q9H792 1746 aa30.1■■■□□ 2.41
CDK9-201ENST00000373264 OVOS2A0A0J9YW53 1432 aa30.1■■■□□ 2.41
CDK9-201ENST00000373264 OVOS2Q6IE36 1432 aa30.1■■■□□ 2.41
CDK9-201ENST00000373264 PLEKHG3A1L390 1219 aa30.1■■■□□ 2.41
CDK9-201ENST00000373264 UPF2Q9HAU5 1272 aaKnown RBP30.09■■■□□ 2.41
CDK9-201ENST00000373264 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
CDK9-201ENST00000373264 NUCB1Q02818 461 aa30.08■■■□□ 2.41
CDK9-201ENST00000373264 SIRT2Q8IXJ6 389 aa30.08■■■□□ 2.41
CDK9-201ENST00000373264 ZNF428Q96B54 188 aa30.08■■■□□ 2.41
CDK9-201ENST00000373264 PTCH1Q13635 1447 aa30.08■■■□□ 2.41
CDK9-201ENST00000373264 LMOD3Q0VAK6 560 aa30.06■■■□□ 2.4
CDK9-201ENST00000373264 EID1Q9Y6B2 187 aa30.06■■■□□ 2.4
CDK9-201ENST00000373264 TBC1D2Q9BYX2 928 aa30.05■■■□□ 2.4
CDK9-201ENST00000373264 ABCC4O15439 1325 aa30.05■■■□□ 2.4
CDK9-201ENST00000373264 FOXO3O43524 673 aa30.05■■■□□ 2.4
CDK9-201ENST00000373264 SPRYD3Q8NCJ5 442 aa30.05■■■□□ 2.4
CDK9-201ENST00000373264 MIS18AQ9NYP9 233 aa30.04■■■□□ 2.4
CDK9-201ENST00000373264 CHD1LQ86WJ1 897 aa30.04■■■□□ 2.4
CDK9-201ENST00000373264 ARHGAP45Q92619 1136 aa30.04■■■□□ 2.4
CDK9-201ENST00000373264 ANKRD45Q5TZF3 282 aa30.03■■■□□ 2.4
CDK9-201ENST00000373264 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
CDK9-201ENST00000373264 RGPD8O14715 1765 aaPredicted RBP30.02■■■□□ 2.4
CDK9-201ENST00000373264 MAP3K19Q56UN5 1328 aa30.02■■■□□ 2.4
CDK9-201ENST00000373264 BECN1Q14457 450 aa30.01■■■□□ 2.4
CDK9-201ENST00000373264 C22orf23Q9BZE7 217 aa30.01■■■□□ 2.39
CDK9-201ENST00000373264 NUTM2GQ5VZR2 741 aa30■■■□□ 2.39
CDK9-201ENST00000373264 SSH2Q76I76 1423 aa30■■■□□ 2.39
CDK9-201ENST00000373264 RIMS1Q86UR5 1692 aaKnown RBP29.99■■■□□ 2.39
CDK9-201ENST00000373264 NGDNQ8NEJ9 315 aaKnown RBP29.98■■■□□ 2.39
CDK9-201ENST00000373264 USP31Q70CQ4 1352 aa29.97■■■□□ 2.39
CDK9-201ENST00000373264 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
CDK9-201ENST00000373264 CHL1O00533 1208 aa29.96■■■□□ 2.39
CDK9-201ENST00000373264 ANTXR1Q9H6X2 564 aa29.95■■■□□ 2.39
CDK9-201ENST00000373264 GSE1Q14687 1217 aa29.95■■■□□ 2.38
CDK9-201ENST00000373264 MTHFSDQ2M296 383 aaKnown RBP29.94■■■□□ 2.38
CDK9-201ENST00000373264 TBX22Q9Y458 520 aa29.94■■■□□ 2.38
CDK9-201ENST00000373264 RGPD1P0DJD0 1748 aa29.93■■■□□ 2.38
CDK9-201ENST00000373264 API5Q9BZZ5 524 aaKnown RBP29.93■■■□□ 2.38
CDK9-201ENST00000373264 RBM33Q96EV2 1170 aaKnown RBP29.92■■■□□ 2.38
CDK9-201ENST00000373264 ARHGAP23Q9P227 1491 aa29.92■■■□□ 2.38
CDK9-201ENST00000373264 KCNA6P17658 529 aa29.91■■■□□ 2.38
CDK9-201ENST00000373264 DIP2AQ14689 1571 aa29.91■■■□□ 2.38
CDK9-201ENST00000373264 SLIT1O75093 1534 aa29.91■■■□□ 2.38
CDK9-201ENST00000373264 RGS12O14924 1447 aa29.9■■■□□ 2.38
CDK9-201ENST00000373264 GCC1Q96CN9 775 aa29.89■■■□□ 2.38
CDK9-201ENST00000373264 EYA1Q99502 592 aa29.89■■■□□ 2.38
CDK9-201ENST00000373264 CRB1P82279 1406 aa29.88■■■□□ 2.37
CDK9-201ENST00000373264 AMPHP49418 695 aa29.88■■■□□ 2.37
CDK9-201ENST00000373264 CEP170BQ9Y4F5 1589 aaPredicted RBP29.88■■■□□ 2.37
CDK9-201ENST00000373264 NLRP6P59044 892 aa29.87■■■□□ 2.37
CDK9-201ENST00000373264 FER1L4A9Z1Z3 1794 aa29.86■■■□□ 2.37
CDK9-201ENST00000373264 THEMISQ8N1K5 641 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms