RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TRIM22Q8IYM9 498 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 CCDC69A6NI79 296 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 EXOSC9Q06265 439 aaKnown RBP11.75□□□□□ -0.53
TRERF1-204ENST00000372922 DYDC1Q8WWB3 177 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 ERCC4Q92889 916 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-204ENST00000372922 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
TRERF1-204ENST00000372922 CCP110O43303 1012 aa11.74□□□□□ -0.53
TRERF1-204ENST00000372922 STK38Q15208 465 aa11.74□□□□□ -0.53
TRERF1-204ENST00000372922 PRDM11Q9NQV5 511 aa11.74□□□□□ -0.53
TRERF1-204ENST00000372922 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
TRERF1-204ENST00000372922 NEK4P51957 841 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 LRRCC1Q9C099 1032 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 SRCIN1Q9C0H9 1055 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 STIM1Q13586 685 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
TRERF1-204ENST00000372922 SMC2O95347 1197 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 MYL6BP14649 208 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 RABEP1Q15276 862 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 CABP1Q9NZU7 370 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 MBD3O95983 291 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
TRERF1-204ENST00000372922 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 ZNHIT6Q9NWK9 470 aaKnown RBP11.72□□□□□ -0.53
TRERF1-204ENST00000372922 DACH1Q9UI36 760 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
TRERF1-204ENST00000372922 TRIM5Q9C035 493 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 SIL1Q9H173 461 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
TRERF1-204ENST00000372922 LUC7LQ9NQ29 371 aaKnown RBP11.72□□□□□ -0.53
TRERF1-204ENST00000372922 BTBD11A6QL63 1104 aa11.71□□□□□ -0.53
TRERF1-204ENST00000372922 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.53
TRERF1-204ENST00000372922 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.53
TRERF1-204ENST00000372922 RPGRIP1LQ68CZ1 1315 aa11.71□□□□□ -0.53
TRERF1-204ENST00000372922 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
TRERF1-204ENST00000372922 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
TRERF1-204ENST00000372922 ZSCAN29Q8IWY8 852 aaPredicted RBP11.71□□□□□ -0.54
TRERF1-204ENST00000372922 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.54
TRERF1-204ENST00000372922 TXLNBQ8N3L3 684 aa11.71□□□□□ -0.54
TRERF1-204ENST00000372922 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-204ENST00000372922 DHX8Q14562 1220 aaKnown RBP11.7□□□□□ -0.54
TRERF1-204ENST00000372922 CDKL5O76039 1030 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 C1orf115Q9H7X2 142 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
TRERF1-204ENST00000372922 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-204ENST00000372922 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 ERLIN2O94905 339 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 STARD3NLO95772 234 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-204ENST00000372922 ZHX3Q9H4I2 956 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 CTNNA3Q9UI47 895 aa11.7□□□□□ -0.54
TRERF1-204ENST00000372922 FKBP4Q02790 459 aaKnown RBP eCLIP11.69□□□□□ -0.54
TRERF1-204ENST00000372922 NUP133Q8WUM0 1156 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 TMOD2Q9NZR1 351 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 WDR63Q8IWG1 891 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 CEP126Q9P2H0 1117 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 TDO2P48775 406 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 ZNF652Q9Y2D9 606 aa11.69□□□□□ -0.54
TRERF1-204ENST00000372922 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-204ENST00000372922 CEBPZQ03701 1054 aaKnown RBP11.68□□□□□ -0.54
TRERF1-204ENST00000372922 KCNH5Q8NCM2 988 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 TAF3Q5VWG9 929 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 AACSQ86V21 672 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 BRPF3Q9ULD4 1205 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
TRERF1-204ENST00000372922 MRE11P49959 708 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
TRERF1-204ENST00000372922 HECW1Q76N89 1606 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ERBINQ96RT1 1412 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 KIAA1107Q9UPP5 1409 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 DESP17661 470 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ZRSR2Q15696 482 aaKnown RBP11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ZNF76P36508 570 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 TICAM2Q86XR7 235 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 LRP2BPQ9P2M1 347 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 PPFIBP1Q86W92 1011 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 TSR2Q969E8 191 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms