RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 THUMPD2Q9BTF0 503 aaKnown RBP36.84■■■■□ 3.49
SSBP3-204ENST00000371320 TMEM57Q8N5G2 664 aa36.82■■■■□ 3.49
SSBP3-204ENST00000371320 SLC26A8Q96RN1 970 aa36.82■■■■□ 3.49
SSBP3-204ENST00000371320 TTC21BQ7Z4L5 1316 aa36.82■■■■□ 3.49
SSBP3-204ENST00000371320 VIRMAQ69YN4 1812 aaKnown RBP36.82■■■■□ 3.49
SSBP3-204ENST00000371320 ACEP12821 1306 aa36.82■■■■□ 3.48
SSBP3-204ENST00000371320 GNAI1P63096 354 aa36.82■■■■□ 3.48
SSBP3-204ENST00000371320 PLEKHG3A1L390 1219 aa36.81■■■■□ 3.48
SSBP3-204ENST00000371320 IFT57Q9NWB7 429 aa36.81■■■■□ 3.48
SSBP3-204ENST00000371320 LMOD3Q0VAK6 560 aa36.8■■■■□ 3.48
SSBP3-204ENST00000371320 NUTM2FA1L443 756 aa36.79■■■■□ 3.48
SSBP3-204ENST00000371320 HDAC1Q13547 482 aaPredicted RBP36.79■■■■□ 3.48
SSBP3-204ENST00000371320 BRPF1P55201 1214 aaPredicted RBP36.78■■■■□ 3.48
SSBP3-204ENST00000371320 DNAJC5Q9H3Z4 198 aa36.78■■■■□ 3.48
SSBP3-204ENST00000371320 SLC4A3P48751 1232 aa36.78■■■■□ 3.48
SSBP3-204ENST00000371320 PTPRUQ92729 1446 aa36.77■■■■□ 3.48
SSBP3-204ENST00000371320 ZNF853P0CG23 659 aa36.76■■■■□ 3.47
SSBP3-204ENST00000371320 DEKP35659 375 aaKnown RBP36.76■■■■□ 3.47
SSBP3-204ENST00000371320 VAMP4O75379 141 aa36.75■■■■□ 3.47
SSBP3-204ENST00000371320 TOPAZ1Q8N9V7 1692 aa36.75■■■■□ 3.47
SSBP3-204ENST00000371320 ZBTB40Q9NUA8 1239 aa36.74■■■■□ 3.47
SSBP3-204ENST00000371320 USP19O94966 1318 aa36.74■■■■□ 3.47
SSBP3-204ENST00000371320 SEC24BO95487 1268 aa36.73■■■■□ 3.47
SSBP3-204ENST00000371320 MBIPQ9NS73 344 aa36.73■■■■□ 3.47
SSBP3-204ENST00000371320 NRKQ7Z2Y5 1582 aa36.73■■■■□ 3.47
SSBP3-204ENST00000371320 AMOTL2Q9Y2J4 779 aa36.73■■■■□ 3.47
SSBP3-204ENST00000371320 USP6P35125 1406 aa36.73■■■■□ 3.47
SSBP3-204ENST00000371320 PLPPR3Q6T4P5 718 aa36.71■■■■□ 3.47
SSBP3-204ENST00000371320 OVOS2A0A0J9YW53 1432 aa36.71■■■■□ 3.47
SSBP3-204ENST00000371320 OVOS2Q6IE36 1432 aa36.71■■■■□ 3.47
SSBP3-204ENST00000371320 EIF4A2Q14240 407 aaKnown RBP36.71■■■■□ 3.47
SSBP3-204ENST00000371320 CFAP44Q96MT7 982 aa36.71■■■■□ 3.47
SSBP3-204ENST00000371320 SLIT1O75093 1534 aa36.71■■■■□ 3.47
SSBP3-204ENST00000371320 TSPYL6Q8N831 410 aa36.7■■■■□ 3.47
SSBP3-204ENST00000371320 TBX22Q9Y458 520 aa36.7■■■■□ 3.47
SSBP3-204ENST00000371320 ARHGAP23Q9P227 1491 aa36.69■■■■□ 3.46
SSBP3-204ENST00000371320 MRPL50Q8N5N7 158 aaKnown RBP36.69■■■■□ 3.46
SSBP3-204ENST00000371320 USP35Q9P2H5 1018 aa36.69■■■■□ 3.46
SSBP3-204ENST00000371320 ARHGAP45Q92619 1136 aa36.66■■■■□ 3.46
SSBP3-204ENST00000371320 FAM83GA6ND36 823 aa36.66■■■■□ 3.46
SSBP3-204ENST00000371320 SULT6B1Q6IMI4 303 aa36.65■■■■□ 3.46
SSBP3-204ENST00000371320 ELL2O00472 640 aaPredicted RBP36.65■■■■□ 3.46
SSBP3-204ENST00000371320 DLG5Q8TDM6 1919 aa36.64■■■■□ 3.46
SSBP3-204ENST00000371320 TWISTNBQ3B726 338 aaPredicted RBP36.64■■■■□ 3.46
SSBP3-204ENST00000371320 AEBP1Q8IUX7 1158 aa36.64■■■■□ 3.46
SSBP3-204ENST00000371320 SMC5Q8IY18 1101 aa36.64■■■■□ 3.46
SSBP3-204ENST00000371320 THEMISQ8N1K5 641 aaPredicted RBP36.64■■■■□ 3.46
SSBP3-204ENST00000371320 UPF2Q9HAU5 1272 aaKnown RBP36.62■■■■□ 3.45
SSBP3-204ENST00000371320 PTCH1Q13635 1447 aa36.62■■■■□ 3.45
SSBP3-204ENST00000371320 USP31Q70CQ4 1352 aa36.62■■■■□ 3.45
SSBP3-204ENST00000371320 DCTN1Q14203 1278 aa36.62■■■■□ 3.45
SSBP3-204ENST00000371320 SSH2Q76I76 1423 aa36.6■■■■□ 3.45
SSBP3-204ENST00000371320 C8orf58Q8NAV2 365 aa36.6■■■■□ 3.45
SSBP3-204ENST00000371320 CHMP4BQ9H444 224 aaKnown RBP36.6■■■■□ 3.45
SSBP3-204ENST00000371320 TTC21AQ8NDW8 1320 aa36.59■■■■□ 3.45
SSBP3-204ENST00000371320 HSP90AB2PQ58FF8 381 aa36.58■■■■□ 3.45
SSBP3-204ENST00000371320 PIK3R4Q99570 1358 aa36.57■■■■□ 3.45
SSBP3-204ENST00000371320 NALCNQ8IZF0 1738 aa36.57■■■■□ 3.44
SSBP3-204ENST00000371320 FER1L4A9Z1Z3 1794 aa36.56■■■■□ 3.44
SSBP3-204ENST00000371320 ZBTB7BO15156 539 aaPredicted RBP36.55■■■■□ 3.44
SSBP3-204ENST00000371320 SOX12O15370 315 aa36.55■■■■□ 3.44
SSBP3-204ENST00000371320 NGDNQ8NEJ9 315 aaKnown RBP36.54■■■■□ 3.44
SSBP3-204ENST00000371320 PEAK1Q9H792 1746 aa36.53■■■■□ 3.44
SSBP3-204ENST00000371320 DIP2AQ14689 1571 aa36.53■■■■□ 3.44
SSBP3-204ENST00000371320 ABCC4O15439 1325 aa36.52■■■■□ 3.44
SSBP3-204ENST00000371320 TBC1D32Q96NH3 1257 aa36.51■■■■□ 3.44
SSBP3-204ENST00000371320 NUCB1Q02818 461 aa36.5■■■■□ 3.43
SSBP3-204ENST00000371320 API5Q9BZZ5 524 aaKnown RBP36.5■■■■□ 3.43
SSBP3-204ENST00000371320 BECN1Q14457 450 aa36.49■■■■□ 3.43
SSBP3-204ENST00000371320 MAP3K19Q56UN5 1328 aa36.49■■■■□ 3.43
SSBP3-204ENST00000371320 NFKBIBQ15653 356 aa36.46■■■■□ 3.43
SSBP3-204ENST00000371320 RGPD1P0DJD0 1748 aa36.46■■■■□ 3.43
SSBP3-204ENST00000371320 MCM10Q7L590 875 aa36.46■■■■□ 3.43
SSBP3-204ENST00000371320 CHL1O00533 1208 aa36.45■■■■□ 3.43
SSBP3-204ENST00000371320 ARHGEF10O15013 1369 aa36.45■■■■□ 3.43
SSBP3-204ENST00000371320 HAP1P54257 671 aaPredicted RBP36.44■■■■□ 3.42
SSBP3-204ENST00000371320 SBNO1A3KN83 1393 aa36.44■■■■□ 3.42
SSBP3-204ENST00000371320 CHD1LQ86WJ1 897 aa36.43■■■■□ 3.42
SSBP3-204ENST00000371320 C1orf115Q9H7X2 142 aa36.43■■■■□ 3.42
SSBP3-204ENST00000371320 FLT4P35916 1363 aa36.43■■■■□ 3.42
SSBP3-204ENST00000371320 LNPKQ9C0E8 428 aa36.42■■■■□ 3.42
SSBP3-204ENST00000371320 GCC1Q96CN9 775 aa36.41■■■■□ 3.42
SSBP3-204ENST00000371320 XRN1Q8IZH2 1706 aaKnown RBP36.41■■■■□ 3.42
SSBP3-204ENST00000371320 KCNA6P17658 529 aa36.4■■■■□ 3.42
SSBP3-204ENST00000371320 AMPHP49418 695 aa36.39■■■■□ 3.42
SSBP3-204ENST00000371320 RGPD8O14715 1765 aaPredicted RBP36.39■■■■□ 3.42
SSBP3-204ENST00000371320 ANKARQ7Z5J8 1434 aa36.38■■■■□ 3.41
SSBP3-204ENST00000371320 KIAA0232Q92628 1395 aa36.37■■■■□ 3.41
SSBP3-204ENST00000371320 KRT24Q2M2I5 525 aa36.36■■■■□ 3.41
SSBP3-204ENST00000371320 KIF24Q5T7B8 1368 aa36.36■■■■□ 3.41
SSBP3-204ENST00000371320 ANKRD45Q5TZF3 282 aa36.35■■■■□ 3.41
SSBP3-204ENST00000371320 MFAP1P55081 439 aaKnown RBP36.35■■■■□ 3.41
SSBP3-204ENST00000371320 NLRP6P59044 892 aa36.35■■■■□ 3.41
SSBP3-204ENST00000371320 FMN2Q9NZ56 1722 aa36.34■■■■□ 3.41
SSBP3-204ENST00000371320 SIRT2Q8IXJ6 389 aa36.34■■■■□ 3.41
SSBP3-204ENST00000371320 CRB1P82279 1406 aa36.33■■■■□ 3.41
SSBP3-204ENST00000371320 PIK3C2AO00443 1686 aa36.33■■■■□ 3.41
SSBP3-204ENST00000371320 RIMS1Q86UR5 1692 aaKnown RBP36.33■■■■□ 3.41
SSBP3-204ENST00000371320 MTHFSDQ2M296 383 aaKnown RBP36.33■■■■□ 3.41
SSBP3-204ENST00000371320 C22orf23Q9BZE7 217 aa36.33■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms