RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
LRIF1-201ENST00000369763 IL16Q14005 1332 aa13.54□□□□□ -0.24
LRIF1-201ENST00000369763 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
LRIF1-201ENST00000369763 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
LRIF1-201ENST00000369763 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
LRIF1-201ENST00000369763 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
LRIF1-201ENST00000369763 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
LRIF1-201ENST00000369763 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
LRIF1-201ENST00000369763 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
LRIF1-201ENST00000369763 MYO3AQ8NEV4 1616 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 PKP1Q13835 747 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 TRIM44Q96DX7 344 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-201ENST00000369763 COG3Q96JB2 828 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
LRIF1-201ENST00000369763 PPLO60437 1756 aa13.53□□□□□ -0.24
LRIF1-201ENST00000369763 MRE11P49959 708 aa13.52□□□□□ -0.24
LRIF1-201ENST00000369763 GCC1Q96CN9 775 aa13.52□□□□□ -0.24
LRIF1-201ENST00000369763 DDX49Q9Y6V7 483 aaKnown RBP13.52□□□□□ -0.24
LRIF1-201ENST00000369763 F6X3S4 739 aa13.52□□□□□ -0.25
LRIF1-201ENST00000369763 IL13P35225 146 aa13.52□□□□□ -0.25
LRIF1-201ENST00000369763 MCTP1Q6DN14 999 aa13.52□□□□□ -0.25
LRIF1-201ENST00000369763 CD163L1Q9NR16 1453 aa13.51□□□□□ -0.25
LRIF1-201ENST00000369763 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
LRIF1-201ENST00000369763 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
LRIF1-201ENST00000369763 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
LRIF1-201ENST00000369763 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
LRIF1-201ENST00000369763 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
LRIF1-201ENST00000369763 LMTK2Q8IWU2 1503 aa13.51□□□□□ -0.25
LRIF1-201ENST00000369763 CDC45O75419 566 aa13.51□□□□□ -0.25
LRIF1-201ENST00000369763 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
LRIF1-201ENST00000369763 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
LRIF1-201ENST00000369763 FOXO3O43524 673 aa13.5□□□□□ -0.25
LRIF1-201ENST00000369763 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
LRIF1-201ENST00000369763 MEIS3Q99687 375 aa13.5□□□□□ -0.25
LRIF1-201ENST00000369763 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
LRIF1-201ENST00000369763 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 SIGLEC1Q9BZZ2 1709 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 SNX21Q969T3 373 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 PTPRMP28827 1452 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
LRIF1-201ENST00000369763 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
LRIF1-201ENST00000369763 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
LRIF1-201ENST00000369763 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
LRIF1-201ENST00000369763 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 CAVIN1Q6NZI2 390 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 API5Q9BZZ5 524 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
LRIF1-201ENST00000369763 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
LRIF1-201ENST00000369763 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 DDIT3P35638 169 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
LRIF1-201ENST00000369763 ESPNB1AK53 854 aa13.46□□□□□ -0.25
LRIF1-201ENST00000369763 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
LRIF1-201ENST00000369763 DTNBO60941 627 aa13.46□□□□□ -0.25
LRIF1-201ENST00000369763 SDSP20132 328 aa13.46□□□□□ -0.25
LRIF1-201ENST00000369763 FAM135BQ49AJ0 1406 aa13.46□□□□□ -0.25
LRIF1-201ENST00000369763 NUTM2GQ5VZR2 741 aa13.46□□□□□ -0.26
LRIF1-201ENST00000369763 HECW2Q9P2P5 1572 aa13.46□□□□□ -0.26
LRIF1-201ENST00000369763 ABCC4O15439 1325 aa13.46□□□□□ -0.26
LRIF1-201ENST00000369763 BAG4O95429 457 aaKnown RBP13.45□□□□□ -0.26
LRIF1-201ENST00000369763 G2E3Q7L622 706 aa13.45□□□□□ -0.26
LRIF1-201ENST00000369763 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
LRIF1-201ENST00000369763 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
LRIF1-201ENST00000369763 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
LRIF1-201ENST00000369763 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
LRIF1-201ENST00000369763 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
LRIF1-201ENST00000369763 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 ZNF428Q96B54 188 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
LRIF1-201ENST00000369763 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
LRIF1-201ENST00000369763 PIK3C2BO00750 1634 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
LRIF1-201ENST00000369763 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
LRIF1-201ENST00000369763 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
LRIF1-201ENST00000369763 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
LRIF1-201ENST00000369763 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 METP08581 1390 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 MSH6P52701 1360 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 MPNDQ8N594 471 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 RILPL2Q969X0 211 aa13.43□□□□□ -0.26
LRIF1-201ENST00000369763 CLCN1P35523 988 aa13.42□□□□□ -0.26
LRIF1-201ENST00000369763 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
LRIF1-201ENST00000369763 AK9Q5TCS8 1911 aa13.42□□□□□ -0.26
LRIF1-201ENST00000369763 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
LRIF1-201ENST00000369763 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
LRIF1-201ENST00000369763 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
LRIF1-201ENST00000369763 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
LRIF1-201ENST00000369763 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms