RNA–Protein interactions for RNA: ENST00000369479.1

CMC4-201, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMC4, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-201ENST00000369479 BCL2L13Q9BXK5 485 aa17.7■□□□□ 0.42
CMC4-201ENST00000369479 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
CMC4-201ENST00000369479 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
CMC4-201ENST00000369479 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
CMC4-201ENST00000369479 TRIM27P14373 513 aa17.69■□□□□ 0.42
CMC4-201ENST00000369479 LTKP29376 864 aa17.69■□□□□ 0.42
CMC4-201ENST00000369479 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
CMC4-201ENST00000369479 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
CMC4-201ENST00000369479 USP31Q70CQ4 1352 aa17.68■□□□□ 0.42
CMC4-201ENST00000369479 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
CMC4-201ENST00000369479 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
CMC4-201ENST00000369479 PIK3R4Q99570 1358 aa17.67■□□□□ 0.42
CMC4-201ENST00000369479 USP6P35125 1406 aa17.67■□□□□ 0.42
CMC4-201ENST00000369479 ACEP12821 1306 aa17.67■□□□□ 0.42
CMC4-201ENST00000369479 OVOS2A0A0J9YW53 1432 aa17.66■□□□□ 0.42
CMC4-201ENST00000369479 OVOS2Q6IE36 1432 aa17.66■□□□□ 0.42
CMC4-201ENST00000369479 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
CMC4-201ENST00000369479 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
CMC4-201ENST00000369479 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
CMC4-201ENST00000369479 NALCNQ8IZF0 1738 aa17.65■□□□□ 0.42
CMC4-201ENST00000369479 ITPRIPQ8IWB1 547 aa17.65■□□□□ 0.42
CMC4-201ENST00000369479 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
CMC4-201ENST00000369479 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.42
CMC4-201ENST00000369479 SSH2Q76I76 1423 aa17.64■□□□□ 0.42
CMC4-201ENST00000369479 VAMP4O75379 141 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 HMOX1P09601 288 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
CMC4-201ENST00000369479 ZBTB40Q9NUA8 1239 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 KIF24Q5T7B8 1368 aa17.64■□□□□ 0.41
CMC4-201ENST00000369479 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
CMC4-201ENST00000369479 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
CMC4-201ENST00000369479 ANKARQ7Z5J8 1434 aa17.63■□□□□ 0.41
CMC4-201ENST00000369479 PTPRUQ92729 1446 aa17.63■□□□□ 0.41
CMC4-201ENST00000369479 TMEM57Q8N5G2 664 aa17.62■□□□□ 0.41
CMC4-201ENST00000369479 MRPL50Q8N5N7 158 aaKnown RBP17.62■□□□□ 0.41
CMC4-201ENST00000369479 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
CMC4-201ENST00000369479 FBLN1P23142 703 aa17.6■□□□□ 0.41
CMC4-201ENST00000369479 EIF4A2Q14240 407 aaKnown RBP17.6■□□□□ 0.41
CMC4-201ENST00000369479 BECN1Q14457 450 aa17.6■□□□□ 0.41
CMC4-201ENST00000369479 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
CMC4-201ENST00000369479 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
CMC4-201ENST00000369479 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
CMC4-201ENST00000369479 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
CMC4-201ENST00000369479 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
CMC4-201ENST00000369479 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
CMC4-201ENST00000369479 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.41
CMC4-201ENST00000369479 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
CMC4-201ENST00000369479 SLC26A8Q96RN1 970 aa17.58■□□□□ 0.4
CMC4-201ENST00000369479 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
CMC4-201ENST00000369479 NBR1Q14596 966 aa17.57■□□□□ 0.4
CMC4-201ENST00000369479 TWISTNBQ3B726 338 aaPredicted RBP17.57■□□□□ 0.4
CMC4-201ENST00000369479 RGPD1P0DJD0 1748 aa17.57■□□□□ 0.4
CMC4-201ENST00000369479 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
CMC4-201ENST00000369479 EIF5BO60841 1220 aaKnown RBP17.56■□□□□ 0.4
CMC4-201ENST00000369479 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
CMC4-201ENST00000369479 FLT4P35916 1363 aa17.55■□□□□ 0.4
CMC4-201ENST00000369479 ABCC4O15439 1325 aa17.55■□□□□ 0.4
CMC4-201ENST00000369479 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
CMC4-201ENST00000369479 NGDNQ8NEJ9 315 aaKnown RBP17.55■□□□□ 0.4
CMC4-201ENST00000369479 USP19O94966 1318 aa17.54■□□□□ 0.4
CMC4-201ENST00000369479 CHL1O00533 1208 aa17.54■□□□□ 0.4
CMC4-201ENST00000369479 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
CMC4-201ENST00000369479 USP54Q70EL1 1684 aa17.54■□□□□ 0.4
CMC4-201ENST00000369479 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
CMC4-201ENST00000369479 NUCB1Q02818 461 aa17.53■□□□□ 0.4
CMC4-201ENST00000369479 THUMPD2Q9BTF0 503 aaKnown RBP17.52■□□□□ 0.4
CMC4-201ENST00000369479 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.39
CMC4-201ENST00000369479 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
CMC4-201ENST00000369479 TBC1D32Q96NH3 1257 aa17.51■□□□□ 0.39
CMC4-201ENST00000369479 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
CMC4-201ENST00000369479 CEP170BQ9Y4F5 1589 aaPredicted RBP17.51■□□□□ 0.39
CMC4-201ENST00000369479 KDRP35968 1356 aa17.51■□□□□ 0.39
CMC4-201ENST00000369479 DEKP35659 375 aaKnown RBP17.5■□□□□ 0.39
CMC4-201ENST00000369479 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
CMC4-201ENST00000369479 C8orf58Q8NAV2 365 aa17.5■□□□□ 0.39
CMC4-201ENST00000369479 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
CMC4-201ENST00000369479 PTPRCP08575 1304 aa17.49■□□□□ 0.39
CMC4-201ENST00000369479 SOS1Q07889 1333 aaPredicted RBP17.49■□□□□ 0.39
CMC4-201ENST00000369479 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
CMC4-201ENST00000369479 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
CMC4-201ENST00000369479 AMPHP49418 695 aa17.48■□□□□ 0.39
CMC4-201ENST00000369479 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
CMC4-201ENST00000369479 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
CMC4-201ENST00000369479 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
CMC4-201ENST00000369479 IGSF1Q8N6C5 1336 aa17.47■□□□□ 0.39
CMC4-201ENST00000369479 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
CMC4-201ENST00000369479 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
CMC4-201ENST00000369479 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
CMC4-201ENST00000369479 SEC24BO95487 1268 aa17.46■□□□□ 0.39
CMC4-201ENST00000369479 CRB1P82279 1406 aa17.46■□□□□ 0.39
CMC4-201ENST00000369479 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
CMC4-201ENST00000369479 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
CMC4-201ENST00000369479 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
CMC4-201ENST00000369479 FAM83GA6ND36 823 aa17.45■□□□□ 0.38
CMC4-201ENST00000369479 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
CMC4-201ENST00000369479 ZNF142P52746 1687 aaPredicted RBP17.45■□□□□ 0.38
CMC4-201ENST00000369479 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
CMC4-201ENST00000369479 CHD2O14647 1828 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms