RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 KDM4FA0A1W2PPD8 638 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 CCDC27Q2M243 656 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 RICTORQ6R327 1708 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
THBS3-201ENST00000368378 CDK19Q9BWU1 502 aa11.09□□□□□ -0.63
THBS3-201ENST00000368378 TERF2IPQ9NYB0 399 aa11.09□□□□□ -0.63
THBS3-201ENST00000368378 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
THBS3-201ENST00000368378 ADRA2BP18089 450 aa11.09□□□□□ -0.63
THBS3-201ENST00000368378 NME9Q86XW9 330 aa11.09□□□□□ -0.63
THBS3-201ENST00000368378 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
THBS3-201ENST00000368378 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
THBS3-201ENST00000368378 TRIM44Q96DX7 344 aaPredicted RBP11.08□□□□□ -0.64
THBS3-201ENST00000368378 CHMP5Q9NZZ3 219 aa11.08□□□□□ -0.64
THBS3-201ENST00000368378 HDGFL2Q7Z4V5 671 aaPredicted RBP11.08□□□□□ -0.64
THBS3-201ENST00000368378 OTUD7AQ8TE49 926 aaPredicted RBP11.08□□□□□ -0.64
THBS3-201ENST00000368378 ABCC3O15438 1527 aa11.08□□□□□ -0.64
THBS3-201ENST00000368378 ZC3H13Q5T200 1668 aaKnown RBP11.07□□□□□ -0.64
THBS3-201ENST00000368378 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 PLEKHF1Q96S99 279 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
THBS3-201ENST00000368378 DIP2CQ9Y2E4 1556 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
THBS3-201ENST00000368378 PPP6R1Q9UPN7 881 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 VIRMAQ69YN4 1812 aaKnown RBP11.07□□□□□ -0.64
THBS3-201ENST00000368378 SSFA2P28290 1259 aa11.07□□□□□ -0.64
THBS3-201ENST00000368378 L1TD1Q5T7N2 865 aaKnown RBP11.06□□□□□ -0.64
THBS3-201ENST00000368378 MCM10Q7L590 875 aa11.06□□□□□ -0.64
THBS3-201ENST00000368378 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
THBS3-201ENST00000368378 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
THBS3-201ENST00000368378 CAMSAP1Q5T5Y3 1602 aa11.06□□□□□ -0.64
THBS3-201ENST00000368378 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
THBS3-201ENST00000368378 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
THBS3-201ENST00000368378 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
THBS3-201ENST00000368378 NLRP1Q9C000 1473 aa11.05□□□□□ -0.64
THBS3-201ENST00000368378 AEBP1Q8IUX7 1158 aa11.05□□□□□ -0.64
THBS3-201ENST00000368378 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
THBS3-201ENST00000368378 NSD2O96028 1365 aa11.05□□□□□ -0.64
THBS3-201ENST00000368378 ABCC11Q96J66 1382 aa11.05□□□□□ -0.64
THBS3-201ENST00000368378 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
THBS3-201ENST00000368378 F6X3S4 739 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 PKP1Q13835 747 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 TWISTNBQ3B726 338 aaPredicted RBP11.04□□□□□ -0.64
THBS3-201ENST00000368378 GAS2L3Q86XJ1 694 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 LTV1Q96GA3 475 aaPredicted RBP11.04□□□□□ -0.64
THBS3-201ENST00000368378 ZBTB40Q9NUA8 1239 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 NEXMIFQ5QGS0 1516 aa11.04□□□□□ -0.64
THBS3-201ENST00000368378 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
THBS3-201ENST00000368378 SLC52A1Q9NWF4 448 aa11.03□□□□□ -0.64
THBS3-201ENST00000368378 FAM43AQ8N2R8 423 aa11.03□□□□□ -0.64
THBS3-201ENST00000368378 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
THBS3-201ENST00000368378 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
THBS3-201ENST00000368378 MYO5BQ9ULV0 1848 aa11.03□□□□□ -0.64
THBS3-201ENST00000368378 ARHGAP31Q2M1Z3 1444 aa11.02□□□□□ -0.64
THBS3-201ENST00000368378 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.64
THBS3-201ENST00000368378 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.64
THBS3-201ENST00000368378 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
THBS3-201ENST00000368378 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
THBS3-201ENST00000368378 CAVIN1Q6NZI2 390 aaKnown RBP11.01□□□□□ -0.65
THBS3-201ENST00000368378 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
THBS3-201ENST00000368378 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
THBS3-201ENST00000368378 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
THBS3-201ENST00000368378 HDAC1Q13547 482 aaPredicted RBP11.01□□□□□ -0.65
THBS3-201ENST00000368378 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
THBS3-201ENST00000368378 MAP4K4O95819 1239 aaPredicted RBP11□□□□□ -0.65
THBS3-201ENST00000368378 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
THBS3-201ENST00000368378 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
THBS3-201ENST00000368378 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
THBS3-201ENST00000368378 USP32Q8NFA0 1604 aa11□□□□□ -0.65
THBS3-201ENST00000368378 PLCB2Q00722 1185 aa11□□□□□ -0.65
THBS3-201ENST00000368378 NUCB1Q02818 461 aa11□□□□□ -0.65
THBS3-201ENST00000368378 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
THBS3-201ENST00000368378 FOXO3O43524 673 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 ZGPATQ8N5A5 531 aaKnown RBP10.99□□□□□ -0.65
THBS3-201ENST00000368378 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 PIK3C2BO00750 1634 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 VAMP4O75379 141 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 EXOC6BQ9Y2D4 811 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 ARHGEF40Q8TER5 1519 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 ADGRB2O60241 1585 aa10.99□□□□□ -0.65
THBS3-201ENST00000368378 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 FCHSD2O94868 740 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 GBP4Q96PP9 640 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 ERBB4Q15303 1308 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 CLTCQ00610 1675 aaKnown RBP10.98□□□□□ -0.65
THBS3-201ENST00000368378 PTPRMP28827 1452 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
THBS3-201ENST00000368378 PRPF40AO75400 957 aaKnown RBP10.98□□□□□ -0.65
THBS3-201ENST00000368378 CDK11BP21127 795 aaKnown RBP10.98□□□□□ -0.65
THBS3-201ENST00000368378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.98□□□□□ -0.65
THBS3-201ENST00000368378 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
THBS3-201ENST00000368378 AGLP35573 1532 aa10.97□□□□□ -0.65
THBS3-201ENST00000368378 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
THBS3-201ENST00000368378 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms