RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ABCC1P33527 1531 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 GORABQ5T7V8 394 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 NEXNQ0ZGT2 675 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 ADCY10Q96PN6 1610 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 NEK4P51957 841 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 KRT24Q2M2I5 525 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
PTPRK-206ENST00000368215 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
PTPRK-206ENST00000368215 IL1RAPL2Q9NP60 686 aa10.34□□□□□ -0.75
PTPRK-206ENST00000368215 YTHDC2Q9H6S0 1430 aaKnown RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 IL16Q14005 1332 aa10.34□□□□□ -0.75
PTPRK-206ENST00000368215 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 PPIP5K1Q6PFW1 1433 aa10.34□□□□□ -0.75
PTPRK-206ENST00000368215 HSP90B1P14625 803 aaKnown RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 TAF7LQ5H9L4 462 aa10.34□□□□□ -0.75
PTPRK-206ENST00000368215 PROSER2Q86WR7 435 aaPredicted RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
PTPRK-206ENST00000368215 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 ERVK-7P63135 1459 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.761e-7■■■■□ 21.6
PTPRK-206ENST00000368215 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 ZCCHC11Q5TAX3 1644 aaKnown RBP10.33□□□□□ -0.76
PTPRK-206ENST00000368215 RPAP2Q8IXW5 612 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-206ENST00000368215 PPP6R1Q9UPN7 881 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 GNAT3A8MTJ3 354 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 PLEKHO1Q53GL0 409 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-206ENST00000368215 TBC1D32Q96NH3 1257 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
PTPRK-206ENST00000368215 UHRF1BP1LA0JNW5 1464 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
PTPRK-206ENST00000368215 TTC21BQ7Z4L5 1316 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 MCM4P33991 863 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 SYAP1Q96A49 352 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-206ENST00000368215 LRRCC1Q9C099 1032 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 TNRQ92752 1358 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 ATF3P18847 181 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 EIF4A2Q14240 407 aaKnown RBP10.32□□□□□ -0.76
PTPRK-206ENST00000368215 ANKLE2Q86XL3 938 aa10.32□□□□□ -0.76
PTPRK-206ENST00000368215 PRDM15P57071 1507 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-206ENST00000368215 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-206ENST00000368215 NUCB2P80303 420 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 RABEP1Q15276 862 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 TRPM2O94759 1503 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 YEATS2Q9ULM3 1422 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 VAMP4O75379 141 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 ZC3H6P61129 1189 aaKnown RBP10.31□□□□□ -0.76
PTPRK-206ENST00000368215 HDAC1Q13547 482 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-206ENST00000368215 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 NPHP1O15259 732 aa10.31□□□□□ -0.76
PTPRK-206ENST00000368215 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
PTPRK-206ENST00000368215 FOXO3O43524 673 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 RUFY2Q8WXA3 655 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 ZNF521Q96K83 1311 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 ERC2O15083 957 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
PTPRK-206ENST00000368215 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 GLIPR1L2Q4G1C9 344 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 TSHZ3Q63HK5 1081 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 INSRP06213 1382 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 CROCC2H7BZ55 1655 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 HSP90AB4PQ58FF6 505 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
PTPRK-206ENST00000368215 ZKSCAN1P17029 563 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-206ENST00000368215 EVA1CP58658 441 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 NUCB1Q02818 461 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 DRC7Q8IY82 874 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 MEIS3Q99687 375 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 SIL1Q9H173 461 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 ZBTB40Q9NUA8 1239 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 BTBD11A6QL63 1104 aa10.29□□□□□ -0.76
PTPRK-206ENST00000368215 MYL6BP14649 208 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 CAVIN1Q6NZI2 390 aaKnown RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 ZFYVE16Q7Z3T8 1539 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 PRPF40AO75400 957 aaKnown RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 C16orf71Q8IYS4 520 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 ZMYM3Q14202 1370 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 ANXA1P04083 346 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 FLIIQ13045 1269 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 TAF7Q15545 349 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 BMP2KLQ5H9B9 411 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 TRMT2AQ8IZ69 625 aaKnown RBP10.28□□□□□ -0.76
PTPRK-206ENST00000368215 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
PTPRK-206ENST00000368215 CNTROBQ8N137 903 aa10.27□□□□□ -0.76
PTPRK-206ENST00000368215 IQGAP3Q86VI3 1631 aa10.27□□□□□ -0.76
PTPRK-206ENST00000368215 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
PTPRK-206ENST00000368215 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
PTPRK-206ENST00000368215 SMC3Q9UQE7 1217 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms