RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 BAG4O95429 457 aaKnown RBP13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 COG3Q96JB2 828 aa13.56□□□□□ -0.24
NECTIN4-201ENST00000368012 A0A0U1RQG5 324 aaPredicted RBP13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 SYCE3A1L190 88 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 CEP152O94986 1710 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
NECTIN4-201ENST00000368012 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 ZCCHC11Q5TAX3 1644 aaKnown RBP13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 ZBTB7BO15156 539 aaPredicted RBP13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 VAMP4O75379 141 aa13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 FCHSD2O94868 740 aa13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 NFE2L2Q16236 605 aa13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 INTS3Q68E01 1043 aaKnown RBP13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
NECTIN4-201ENST00000368012 ANKRD36BQ8N2N9 1353 aa13.53□□□□□ -0.24
NECTIN4-201ENST00000368012 FSD2A1L4K1 749 aa13.53□□□□□ -0.24
NECTIN4-201ENST00000368012 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
NECTIN4-201ENST00000368012 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
NECTIN4-201ENST00000368012 CD109Q6YHK3 1445 aa13.52□□□□□ -0.24
NECTIN4-201ENST00000368012 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.24
NECTIN4-201ENST00000368012 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.24
NECTIN4-201ENST00000368012 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.24
NECTIN4-201ENST00000368012 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
NECTIN4-201ENST00000368012 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
NECTIN4-201ENST00000368012 NPATQ14207 1427 aa13.52□□□□□ -0.25
NECTIN4-201ENST00000368012 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
NECTIN4-201ENST00000368012 MYOM2P54296 1465 aa13.52□□□□□ -0.25
NECTIN4-201ENST00000368012 MEIS3Q99687 375 aa13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 TET3O43151 1660 aa13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 IL1RAPL2Q9NP60 686 aa13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 NUCB2P80303 420 aa13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
NECTIN4-201ENST00000368012 RABEP1Q15276 862 aa13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 SDSP20132 328 aa13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 PRIM1P49642 420 aaKnown RBP13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
NECTIN4-201ENST00000368012 REC8O95072 547 aa13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 GSPT1P15170 499 aaKnown RBP13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
NECTIN4-201ENST00000368012 STK31Q9BXU1 1019 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 KCNJ4P48050 445 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 HMMRO75330 724 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 MCCP23508 829 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 ZSCAN23Q3MJ62 389 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 ZSCAN30Q86W11 494 aa13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
NECTIN4-201ENST00000368012 PTMSP20962 102 aa13.47□□□□□ -0.25
NECTIN4-201ENST00000368012 SNX21Q969T3 373 aa13.47□□□□□ -0.25
NECTIN4-201ENST00000368012 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
NECTIN4-201ENST00000368012 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
NECTIN4-201ENST00000368012 RBSNQ9H1K0 784 aa13.47□□□□□ -0.25
NECTIN4-201ENST00000368012 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.25
NECTIN4-201ENST00000368012 SHROOM2Q13796 1616 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 ASXL2Q76L83 1435 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 FOXO3O43524 673 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 AMPHP49418 695 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 TTC22Q5TAA0 569 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 SHPRHQ149N8 1683 aa13.46□□□□□ -0.26
NECTIN4-201ENST00000368012 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
NECTIN4-201ENST00000368012 KIF1BO60333 1816 aa13.45□□□□□ -0.26
NECTIN4-201ENST00000368012 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
NECTIN4-201ENST00000368012 EFCAB6Q5THR3 1501 aa13.45□□□□□ -0.26
NECTIN4-201ENST00000368012 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 MROH2AA6NES4 1674 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 FAM177BA6PVY3 158 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 ERC2O15083 957 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 KIF2CQ99661 725 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 NSD2O96028 1365 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 FIBPO43427 364 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
NECTIN4-201ENST00000368012 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 UQCRHP07919 91 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms