RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 TRIM35Q9UPQ4 493 aa19.52■□□□□ 0.72
NEK2-201ENST00000366998 FOXO3O43524 673 aa19.52■□□□□ 0.71
NEK2-201ENST00000366998 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
NEK2-201ENST00000366998 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
NEK2-201ENST00000366998 PHACTR3Q96KR7 559 aa19.5■□□□□ 0.71
NEK2-201ENST00000366998 RGPD1P0DJD0 1748 aa19.5■□□□□ 0.71
NEK2-201ENST00000366998 DCCP43146 1447 aa19.5■□□□□ 0.71
NEK2-201ENST00000366998 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
NEK2-201ENST00000366998 NFE2L2Q16236 605 aa19.5■□□□□ 0.71
NEK2-201ENST00000366998 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
NEK2-201ENST00000366998 LTN1O94822 1766 aa19.49■□□□□ 0.71
NEK2-201ENST00000366998 DLG5Q8TDM6 1919 aa19.49■□□□□ 0.71
NEK2-201ENST00000366998 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
NEK2-201ENST00000366998 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
NEK2-201ENST00000366998 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
NEK2-201ENST00000366998 MST1RQ04912 1400 aa19.48■□□□□ 0.71
NEK2-201ENST00000366998 TRPM3Q9HCF6 1732 aaPredicted RBP19.48■□□□□ 0.71
NEK2-201ENST00000366998 AEBP1Q8IUX7 1158 aa19.47■□□□□ 0.71
NEK2-201ENST00000366998 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
NEK2-201ENST00000366998 MSH6P52701 1360 aa19.46■□□□□ 0.71
NEK2-201ENST00000366998 KIF24Q5T7B8 1368 aa19.46■□□□□ 0.71
NEK2-201ENST00000366998 LMOD2Q6P5Q4 547 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 IL16Q14005 1332 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 ARHGEF10O15013 1369 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 HOXC9P31274 260 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 CADPS2Q86UW7 1296 aa19.45■□□□□ 0.7
NEK2-201ENST00000366998 NFAT5O94916 1531 aa19.44■□□□□ 0.7
NEK2-201ENST00000366998 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
NEK2-201ENST00000366998 CCDC136Q96JN2 1154 aa19.44■□□□□ 0.7
NEK2-201ENST00000366998 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
NEK2-201ENST00000366998 BCAR3O75815 825 aa19.43■□□□□ 0.7
NEK2-201ENST00000366998 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
NEK2-201ENST00000366998 RTL1A6NKG5 1358 aa19.42■□□□□ 0.7
NEK2-201ENST00000366998 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
NEK2-201ENST00000366998 CRBNQ96SW2 442 aa19.42■□□□□ 0.7
NEK2-201ENST00000366998 ZNF335Q9H4Z2 1342 aaPredicted RBP19.41■□□□□ 0.7
NEK2-201ENST00000366998 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
NEK2-201ENST00000366998 LMOD3Q0VAK6 560 aa19.41■□□□□ 0.7
NEK2-201ENST00000366998 C20orf194Q5TEA3 1177 aa19.41■□□□□ 0.7
NEK2-201ENST00000366998 CALD1Q05682 793 aaKnown RBP19.4■□□□□ 0.7
NEK2-201ENST00000366998 ALS2Q96Q42 1657 aa19.39■□□□□ 0.7
NEK2-201ENST00000366998 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.7
NEK2-201ENST00000366998 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.7
NEK2-201ENST00000366998 EYA1Q99502 592 aa19.39■□□□□ 0.7
NEK2-201ENST00000366998 THUMPD2Q9BTF0 503 aaKnown RBP19.39■□□□□ 0.7
NEK2-201ENST00000366998 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.7
NEK2-201ENST00000366998 SLIT3O75094 1523 aa19.39■□□□□ 0.69
NEK2-201ENST00000366998 CANXP27824 592 aaKnown RBP19.39■□□□□ 0.69
NEK2-201ENST00000366998 RARSP54136 660 aaKnown RBP19.39■□□□□ 0.69
NEK2-201ENST00000366998 EXOSC9Q06265 439 aaKnown RBP19.39■□□□□ 0.69
NEK2-201ENST00000366998 IP6K1Q92551 441 aa19.37■□□□□ 0.69
NEK2-201ENST00000366998 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
NEK2-201ENST00000366998 PHRF1Q9P1Y6 1649 aaKnown RBP19.37■□□□□ 0.69
NEK2-201ENST00000366998 KDRP35968 1356 aa19.36■□□□□ 0.69
NEK2-201ENST00000366998 NPHP3Q7Z494 1330 aa19.36■□□□□ 0.69
NEK2-201ENST00000366998 GCP02774 474 aa19.36■□□□□ 0.69
NEK2-201ENST00000366998 CT47B1P0C2W7 299 aaPredicted RBP19.36■□□□□ 0.69
NEK2-201ENST00000366998 USP19O94966 1318 aa19.36■□□□□ 0.69
NEK2-201ENST00000366998 FAM83GA6ND36 823 aa19.35■□□□□ 0.69
NEK2-201ENST00000366998 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
NEK2-201ENST00000366998 BCL2L13Q9BXK5 485 aa19.35■□□□□ 0.69
NEK2-201ENST00000366998 GNAI1P63096 354 aa19.34■□□□□ 0.69
NEK2-201ENST00000366998 DCTN1Q14203 1278 aa19.34■□□□□ 0.69
NEK2-201ENST00000366998 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
NEK2-201ENST00000366998 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
NEK2-201ENST00000366998 RGPD2P0DJD1 1756 aa19.32■□□□□ 0.68
NEK2-201ENST00000366998 MED1Q15648 1581 aaPredicted RBP19.31■□□□□ 0.68
NEK2-201ENST00000366998 MTHFSDQ2M296 383 aaKnown RBP19.31■□□□□ 0.68
NEK2-201ENST00000366998 TNS3Q68CZ2 1445 aa19.31■□□□□ 0.68
NEK2-201ENST00000366998 USHBP1Q8N6Y0 703 aa19.31■□□□□ 0.68
NEK2-201ENST00000366998 PXDNQ92626 1479 aa19.3■□□□□ 0.68
NEK2-201ENST00000366998 BRINP3Q76B58 766 aa19.3■□□□□ 0.68
NEK2-201ENST00000366998 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
NEK2-201ENST00000366998 SMC4Q9NTJ3 1288 aa19.3■□□□□ 0.68
NEK2-201ENST00000366998 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
NEK2-201ENST00000366998 PDE3AQ14432 1141 aa19.29■□□□□ 0.68
NEK2-201ENST00000366998 MCM10Q7L590 875 aa19.29■□□□□ 0.68
NEK2-201ENST00000366998 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
NEK2-201ENST00000366998 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
NEK2-201ENST00000366998 RGPD5Q99666 1765 aa19.28■□□□□ 0.68
NEK2-201ENST00000366998 RTF1Q92541 710 aaKnown RBP19.28■□□□□ 0.68
NEK2-201ENST00000366998 PANK1Q8TE04 598 aa19.27■□□□□ 0.68
NEK2-201ENST00000366998 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
NEK2-201ENST00000366998 ZC3H6P61129 1189 aaKnown RBP19.26■□□□□ 0.67
NEK2-201ENST00000366998 SSH1Q8WYL5 1049 aa19.26■□□□□ 0.67
NEK2-201ENST00000366998 NBPF6Q5VWK0 638 aa19.26■□□□□ 0.67
NEK2-201ENST00000366998 NBPF4Q96M43 638 aa19.26■□□□□ 0.67
NEK2-201ENST00000366998 SPATA31A3Q5VYP0 1347 aa19.26■□□□□ 0.67
NEK2-201ENST00000366998 ANKRD24Q8TF21 1146 aa19.25■□□□□ 0.67
NEK2-201ENST00000366998 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
NEK2-201ENST00000366998 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
NEK2-201ENST00000366998 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
NEK2-201ENST00000366998 CRYBG1Q9Y4K1 1723 aa19.24■□□□□ 0.67
NEK2-201ENST00000366998 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
NEK2-201ENST00000366998 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
NEK2-201ENST00000366998 CABLES1Q8TDN4 633 aa19.23■□□□□ 0.67
NEK2-201ENST00000366998 ALDH1L2Q3SY69 923 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 CLUAP1Q96AJ1 413 aa19.22■□□□□ 0.67
NEK2-201ENST00000366998 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms