RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
PRKN-204ENST00000366896 PMFBP1Q8TBY8 1022 aa18.76■□□□□ 0.59
PRKN-204ENST00000366896 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
PRKN-204ENST00000366896 CT47B1P0C2W7 299 aaPredicted RBP18.75■□□□□ 0.59
PRKN-204ENST00000366896 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
PRKN-204ENST00000366896 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
PRKN-204ENST00000366896 MSH6P52701 1360 aa18.74■□□□□ 0.59
PRKN-204ENST00000366896 AKAP12Q02952 1782 aa18.74■□□□□ 0.59
PRKN-204ENST00000366896 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
PRKN-204ENST00000366896 SEC24BO95487 1268 aa18.73■□□□□ 0.59
PRKN-204ENST00000366896 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
PRKN-204ENST00000366896 PCDHB15Q9Y5E8 787 aa18.72■□□□□ 0.59
PRKN-204ENST00000366896 ATF3P18847 181 aa18.72■□□□□ 0.59
PRKN-204ENST00000366896 MON2Q7Z3U7 1717 aa18.72■□□□□ 0.59
PRKN-204ENST00000366896 MST1RQ04912 1400 aa18.71■□□□□ 0.59
PRKN-204ENST00000366896 ACEP12821 1306 aa18.71■□□□□ 0.59
PRKN-204ENST00000366896 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
PRKN-204ENST00000366896 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
PRKN-204ENST00000366896 CADPS2Q86UW7 1296 aa18.7■□□□□ 0.58
PRKN-204ENST00000366896 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
PRKN-204ENST00000366896 BECN1Q14457 450 aa18.68■□□□□ 0.58
PRKN-204ENST00000366896 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
PRKN-204ENST00000366896 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
PRKN-204ENST00000366896 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
PRKN-204ENST00000366896 EDC4Q6P2E9 1401 aaKnown RBP18.67■□□□□ 0.58
PRKN-204ENST00000366896 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
PRKN-204ENST00000366896 ORAI2Q96SN7 254 aa18.66■□□□□ 0.58
PRKN-204ENST00000366896 USP6P35125 1406 aa18.66■□□□□ 0.58
PRKN-204ENST00000366896 NGDNQ8NEJ9 315 aaKnown RBP18.66■□□□□ 0.58
PRKN-204ENST00000366896 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
PRKN-204ENST00000366896 RWDD1Q9H446 243 aaPredicted RBP18.65■□□□□ 0.58
PRKN-204ENST00000366896 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
PRKN-204ENST00000366896 L1TD1Q5T7N2 865 aaKnown RBP18.64■□□□□ 0.57
PRKN-204ENST00000366896 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
PRKN-204ENST00000366896 KIF20BQ96Q89 1820 aa18.64■□□□□ 0.57
PRKN-204ENST00000366896 IL16Q14005 1332 aa18.64■□□□□ 0.57
PRKN-204ENST00000366896 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
PRKN-204ENST00000366896 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
PRKN-204ENST00000366896 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
PRKN-204ENST00000366896 ANTXR1Q9H6X2 564 aa18.63■□□□□ 0.57
PRKN-204ENST00000366896 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
PRKN-204ENST00000366896 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
PRKN-204ENST00000366896 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
PRKN-204ENST00000366896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKN-204ENST00000366896 PLEKHF1Q96S99 279 aa18.62■□□□□ 0.57
PRKN-204ENST00000366896 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
PRKN-204ENST00000366896 FYB1O15117 783 aa18.61■□□□□ 0.57
PRKN-204ENST00000366896 RRAGDQ9NQL2 400 aaPredicted RBP18.61■□□□□ 0.57
PRKN-204ENST00000366896 TTC21BQ7Z4L5 1316 aa18.6■□□□□ 0.57
PRKN-204ENST00000366896 SLKQ9H2G2 1235 aaPredicted RBP18.6■□□□□ 0.57
PRKN-204ENST00000366896 SLAIN2Q9P270 581 aa18.6■□□□□ 0.57
PRKN-204ENST00000366896 TRIM35Q9UPQ4 493 aa18.59■□□□□ 0.57
PRKN-204ENST00000366896 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
PRKN-204ENST00000366896 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
PRKN-204ENST00000366896 FOXO3O43524 673 aa18.58■□□□□ 0.57
PRKN-204ENST00000366896 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.57
PRKN-204ENST00000366896 NME9Q86XW9 330 aa18.58■□□□□ 0.57
PRKN-204ENST00000366896 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.57
PRKN-204ENST00000366896 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
PRKN-204ENST00000366896 DZIP1LQ8IYY4 767 aaKnown RBP18.58■□□□□ 0.56
PRKN-204ENST00000366896 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
PRKN-204ENST00000366896 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
PRKN-204ENST00000366896 SMC4Q9NTJ3 1288 aa18.57■□□□□ 0.56
PRKN-204ENST00000366896 HDAC1Q13547 482 aaPredicted RBP18.57■□□□□ 0.56
PRKN-204ENST00000366896 BRINP3Q76B58 766 aa18.57■□□□□ 0.56
PRKN-204ENST00000366896 TTC21AQ8NDW8 1320 aa18.57■□□□□ 0.56
PRKN-204ENST00000366896 PSME1Q06323 249 aa18.56■□□□□ 0.56
PRKN-204ENST00000366896 TRIM27P14373 513 aa18.56■□□□□ 0.56
PRKN-204ENST00000366896 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
PRKN-204ENST00000366896 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
PRKN-204ENST00000366896 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
PRKN-204ENST00000366896 ZRANB1Q9UGI0 708 aa18.55■□□□□ 0.56
PRKN-204ENST00000366896 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
PRKN-204ENST00000366896 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
PRKN-204ENST00000366896 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
PRKN-204ENST00000366896 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
PRKN-204ENST00000366896 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
PRKN-204ENST00000366896 OVOS2A0A0J9YW53 1432 aa18.52■□□□□ 0.56
PRKN-204ENST00000366896 OVOS2Q6IE36 1432 aa18.52■□□□□ 0.56
PRKN-204ENST00000366896 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
PRKN-204ENST00000366896 FSD2A1L4K1 749 aa18.52■□□□□ 0.55
PRKN-204ENST00000366896 ITPRIPQ8IWB1 547 aa18.52■□□□□ 0.55
PRKN-204ENST00000366896 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 COG3Q96JB2 828 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 PXDNQ92626 1479 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 USP54Q70EL1 1684 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 RIPK4P57078 832 aa18.51■□□□□ 0.55
PRKN-204ENST00000366896 NOB1Q9ULX3 412 aaKnown RBP18.51■□□□□ 0.55
PRKN-204ENST00000366896 MARF1Q9Y4F3 1742 aaKnown RBP18.5■□□□□ 0.55
PRKN-204ENST00000366896 XRCC6P12956 609 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKN-204ENST00000366896 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
PRKN-204ENST00000366896 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
PRKN-204ENST00000366896 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
PRKN-204ENST00000366896 SMC5Q8IY18 1101 aa18.5■□□□□ 0.55
PRKN-204ENST00000366896 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
PRKN-204ENST00000366896 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
PRKN-204ENST00000366896 GOLGA6L3A6NEY3 463 aa18.49■□□□□ 0.55
PRKN-204ENST00000366896 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms