RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
CLIP2-202ENST00000361545 GCC1Q96CN9 775 aa22.36■■□□□ 1.17
CLIP2-202ENST00000361545 MAP4K4O95819 1239 aaPredicted RBP22.35■■□□□ 1.17
CLIP2-202ENST00000361545 NUCB2P80303 420 aa22.35■■□□□ 1.17
CLIP2-202ENST00000361545 LRRCC1Q9C099 1032 aa22.35■■□□□ 1.17
CLIP2-202ENST00000361545 BRMS1Q9HCU9 246 aa22.35■■□□□ 1.17
CLIP2-202ENST00000361545 ATP2B1P20020 1258 aa22.35■■□□□ 1.17
CLIP2-202ENST00000361545 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
CLIP2-202ENST00000361545 TMPOP42166 694 aaKnown RBP22.34■■□□□ 1.17
CLIP2-202ENST00000361545 CCDC73Q6ZRK6 1079 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 ANKRD20A12PQ8NF67 263 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 DENND4BO75064 1496 aaPredicted RBP22.34■■□□□ 1.17
CLIP2-202ENST00000361545 SRGAP3O43295 1099 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 FANCAO15360 1455 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 XBP1P17861 261 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 NEK4P51957 841 aa22.34■■□□□ 1.17
CLIP2-202ENST00000361545 ATP2B2Q01814 1243 aa22.33■■□□□ 1.17
CLIP2-202ENST00000361545 HIP1O00291 1037 aa22.33■■□□□ 1.17
CLIP2-202ENST00000361545 SLC3A2P08195 630 aaKnown RBP22.33■■□□□ 1.16
CLIP2-202ENST00000361545 CCAR2Q8N163 923 aaKnown RBP22.33■■□□□ 1.16
CLIP2-202ENST00000361545 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLIP2-202ENST00000361545 PTPN23Q9H3S7 1636 aa22.32■■□□□ 1.16
CLIP2-202ENST00000361545 WASLO00401 505 aaPredicted RBP22.32■■□□□ 1.16
CLIP2-202ENST00000361545 FKBP4Q02790 459 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLIP2-202ENST00000361545 EMILIN1Q9Y6C2 1016 aa22.32■■□□□ 1.16
CLIP2-202ENST00000361545 STARD3NLO95772 234 aa22.31■■□□□ 1.16
CLIP2-202ENST00000361545 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
CLIP2-202ENST00000361545 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
CLIP2-202ENST00000361545 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
CLIP2-202ENST00000361545 RBM5P52756 815 aaKnown RBP eCLIP22.3■■□□□ 1.16
CLIP2-202ENST00000361545 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-202ENST00000361545 AACSQ86V21 672 aa22.3■■□□□ 1.16
CLIP2-202ENST00000361545 CT47B1P0C2W7 299 aaPredicted RBP22.3■■□□□ 1.16
CLIP2-202ENST00000361545 SASS6Q6UVJ0 657 aa22.29■■□□□ 1.16
CLIP2-202ENST00000361545 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
CLIP2-202ENST00000361545 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
CLIP2-202ENST00000361545 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 IPO7O95373 1038 aaKnown RBP22.28■■□□□ 1.16
CLIP2-202ENST00000361545 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 CEP126Q9P2H0 1117 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 DUSP27Q5VZP5 1158 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 NGLY1Q96IV0 654 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 PPP6R1Q9UPN7 881 aa22.28■■□□□ 1.16
CLIP2-202ENST00000361545 GSE1Q14687 1217 aa22.27■■□□□ 1.16
CLIP2-202ENST00000361545 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
CLIP2-202ENST00000361545 NOS1P29475 1434 aa22.26■■□□□ 1.15
CLIP2-202ENST00000361545 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
CLIP2-202ENST00000361545 NACAP1Q9BZK3 213 aa22.25■■□□□ 1.15
CLIP2-202ENST00000361545 GOLGA6L1Q8N7Z2 621 aa22.25■■□□□ 1.15
CLIP2-202ENST00000361545 KRT28Q7Z3Y7 464 aa22.24■■□□□ 1.15
CLIP2-202ENST00000361545 ZNF592Q92610 1267 aa22.24■■□□□ 1.15
CLIP2-202ENST00000361545 SDF4Q9BRK5 362 aa22.24■■□□□ 1.15
CLIP2-202ENST00000361545 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
CLIP2-202ENST00000361545 STK3Q13188 491 aa22.22■■□□□ 1.15
CLIP2-202ENST00000361545 RAI14Q9P0K7 980 aa22.22■■□□□ 1.15
CLIP2-202ENST00000361545 FAM135AQ9P2D6 1515 aa22.22■■□□□ 1.15
CLIP2-202ENST00000361545 CNKSR2Q8WXI2 1034 aa22.21■■□□□ 1.15
CLIP2-202ENST00000361545 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-202ENST00000361545 TAF7Q15545 349 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-202ENST00000361545 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
CLIP2-202ENST00000361545 ZSCAN29Q8IWY8 852 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-202ENST00000361545 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
CLIP2-202ENST00000361545 DHX29Q7Z478 1369 aaKnown RBP22.2■■□□□ 1.14
CLIP2-202ENST00000361545 ZPR1O75312 459 aa22.2■■□□□ 1.14
CLIP2-202ENST00000361545 CHD1LQ86WJ1 897 aa22.2■■□□□ 1.14
CLIP2-202ENST00000361545 SLFN5Q08AF3 891 aa22.19■■□□□ 1.14
CLIP2-202ENST00000361545 EXOC6BQ9Y2D4 811 aa22.19■■□□□ 1.14
CLIP2-202ENST00000361545 CEBPZQ03701 1054 aaKnown RBP22.19■■□□□ 1.14
CLIP2-202ENST00000361545 LRP2BPQ9P2M1 347 aa22.19■■□□□ 1.14
CLIP2-202ENST00000361545 CYP46A1Q9Y6A2 500 aa22.19■■□□□ 1.14
CLIP2-202ENST00000361545 IDH1O75874 414 aaKnown RBP22.18■■□□□ 1.14
CLIP2-202ENST00000361545 RABEP1Q15276 862 aa22.18■■□□□ 1.14
CLIP2-202ENST00000361545 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CLIP2-202ENST00000361545 NUP133Q8WUM0 1156 aa22.18■■□□□ 1.14
CLIP2-202ENST00000361545 MYD88Q99836 296 aa22.18■■□□□ 1.14
CLIP2-202ENST00000361545 CWC27Q6UX04 472 aaKnown RBP22.17■■□□□ 1.14
CLIP2-202ENST00000361545 ABCF2Q9UG63 623 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 R3HCC1Q9Y3T6 440 aaKnown RBP22.17■■□□□ 1.14
CLIP2-202ENST00000361545 FANCIQ9NVI1 1328 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 METTL24Q5JXM2 366 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 EXOC5O00471 708 aa22.17■■□□□ 1.14
CLIP2-202ENST00000361545 C14orf93Q9H972 538 aaKnown RBP22.17■■□□□ 1.14
CLIP2-202ENST00000361545 TDO2P48775 406 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 HOMER1Q86YM7 354 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 TNRQ92752 1358 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 OLFM4Q6UX06 510 aa22.16■■□□□ 1.14
CLIP2-202ENST00000361545 PDCP20941 246 aa22.15■■□□□ 1.14
CLIP2-202ENST00000361545 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
CLIP2-202ENST00000361545 RPAP2Q8IXW5 612 aaPredicted RBP22.15■■□□□ 1.14
CLIP2-202ENST00000361545 IFT57Q9NWB7 429 aa22.15■■□□□ 1.14
CLIP2-202ENST00000361545 CCDC69A6NI79 296 aa22.15■■□□□ 1.14
CLIP2-202ENST00000361545 MCM2P49736 904 aa22.15■■□□□ 1.14
CLIP2-202ENST00000361545 CDK5RAP3Q96JB5 506 aa22.15■■□□□ 1.14
CLIP2-202ENST00000361545 ACEP12821 1306 aa22.14■■□□□ 1.13
CLIP2-202ENST00000361545 F6X3S4 739 aa22.13■■□□□ 1.13
CLIP2-202ENST00000361545 FIBPO43427 364 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms