RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ZRANB1Q9UGI0 708 aa33.57■■■□□ 2.96
CUEDC1-201ENST00000360238 ITPRIPQ8IWB1 547 aa33.57■■■□□ 2.96
CUEDC1-201ENST00000360238 NCKAP5LQ9HCH0 1330 aa33.56■■■□□ 2.96
CUEDC1-201ENST00000360238 USP19O94966 1318 aa33.56■■■□□ 2.96
CUEDC1-201ENST00000360238 NALCNQ8IZF0 1738 aa33.55■■■□□ 2.96
CUEDC1-201ENST00000360238 IFT57Q9NWB7 429 aa33.53■■■□□ 2.96
CUEDC1-201ENST00000360238 LMOD3Q0VAK6 560 aa33.53■■■□□ 2.96
CUEDC1-201ENST00000360238 GNAI1P63096 354 aa33.52■■■□□ 2.96
CUEDC1-201ENST00000360238 TMEM57Q8N5G2 664 aa33.51■■■□□ 2.96
CUEDC1-201ENST00000360238 OVOS2A0A0J9YW53 1432 aa33.49■■■□□ 2.95
CUEDC1-201ENST00000360238 OVOS2Q6IE36 1432 aa33.49■■■□□ 2.95
CUEDC1-201ENST00000360238 SLIT1O75093 1534 aa33.49■■■□□ 2.95
CUEDC1-201ENST00000360238 ZNF853P0CG23 659 aa33.48■■■□□ 2.95
CUEDC1-201ENST00000360238 RRS1Q15050 365 aaKnown RBP33.48■■■□□ 2.95
CUEDC1-201ENST00000360238 ZBTB40Q9NUA8 1239 aa33.48■■■□□ 2.95
CUEDC1-201ENST00000360238 PTCH1Q13635 1447 aa33.47■■■□□ 2.95
CUEDC1-201ENST00000360238 LTKP29376 864 aa33.47■■■□□ 2.95
CUEDC1-201ENST00000360238 SLC4A3P48751 1232 aa33.47■■■□□ 2.95
CUEDC1-201ENST00000360238 ARHGAP23Q9P227 1491 aa33.46■■■□□ 2.95
CUEDC1-201ENST00000360238 PLEKHG3A1L390 1219 aa33.46■■■□□ 2.95
CUEDC1-201ENST00000360238 TTC21BQ7Z4L5 1316 aa33.46■■■□□ 2.95
CUEDC1-201ENST00000360238 SEC24BO95487 1268 aa33.45■■■□□ 2.95
CUEDC1-201ENST00000360238 USP6P35125 1406 aa33.45■■■□□ 2.95
CUEDC1-201ENST00000360238 PIK3R4Q99570 1358 aa33.44■■■□□ 2.94
CUEDC1-201ENST00000360238 VAMP4O75379 141 aa33.44■■■□□ 2.94
CUEDC1-201ENST00000360238 SMC5Q8IY18 1101 aa33.44■■■□□ 2.94
CUEDC1-201ENST00000360238 ARHGAP45Q92619 1136 aa33.44■■■□□ 2.94
CUEDC1-201ENST00000360238 PTPRUQ92729 1446 aa33.43■■■□□ 2.94
CUEDC1-201ENST00000360238 THUMPD2Q9BTF0 503 aaKnown RBP33.43■■■□□ 2.94
CUEDC1-201ENST00000360238 RGPD1P0DJD0 1748 aa33.42■■■□□ 2.94
CUEDC1-201ENST00000360238 ACEP12821 1306 aa33.42■■■□□ 2.94
CUEDC1-201ENST00000360238 DIP2AQ14689 1571 aa33.42■■■□□ 2.94
CUEDC1-201ENST00000360238 UPF2Q9HAU5 1272 aaKnown RBP33.41■■■□□ 2.94
CUEDC1-201ENST00000360238 FER1L4A9Z1Z3 1794 aa33.41■■■□□ 2.94
CUEDC1-201ENST00000360238 CFAP44Q96MT7 982 aa33.41■■■□□ 2.94
CUEDC1-201ENST00000360238 MBIPQ9NS73 344 aa33.41■■■□□ 2.94
CUEDC1-201ENST00000360238 MRPL50Q8N5N7 158 aaKnown RBP33.4■■■□□ 2.94
CUEDC1-201ENST00000360238 PEAK1Q9H792 1746 aa33.4■■■□□ 2.94
CUEDC1-201ENST00000360238 EID1Q9Y6B2 187 aa33.4■■■□□ 2.94
CUEDC1-201ENST00000360238 RIMS1Q86UR5 1692 aaKnown RBP33.39■■■□□ 2.94
CUEDC1-201ENST00000360238 CHMP4BQ9H444 224 aaKnown RBP33.39■■■□□ 2.94
CUEDC1-201ENST00000360238 USP31Q70CQ4 1352 aa33.38■■■□□ 2.93
CUEDC1-201ENST00000360238 FMN2Q9NZ56 1722 aa33.37■■■□□ 2.93
CUEDC1-201ENST00000360238 SSH2Q76I76 1423 aa33.37■■■□□ 2.93
CUEDC1-201ENST00000360238 EIF4A2Q14240 407 aaKnown RBP33.35■■■□□ 2.93
CUEDC1-201ENST00000360238 TSPYL6Q8N831 410 aa33.35■■■□□ 2.93
CUEDC1-201ENST00000360238 TBC1D32Q96NH3 1257 aa33.35■■■□□ 2.93
CUEDC1-201ENST00000360238 BECN1Q14457 450 aa33.33■■■□□ 2.93
CUEDC1-201ENST00000360238 TWISTNBQ3B726 338 aaPredicted RBP33.33■■■□□ 2.93
CUEDC1-201ENST00000360238 ABCC4O15439 1325 aa33.32■■■□□ 2.92
CUEDC1-201ENST00000360238 NFKBIBQ15653 356 aa33.31■■■□□ 2.92
CUEDC1-201ENST00000360238 TBX22Q9Y458 520 aa33.31■■■□□ 2.92
CUEDC1-201ENST00000360238 XRN1Q8IZH2 1706 aaKnown RBP33.31■■■□□ 2.92
CUEDC1-201ENST00000360238 CEBPAP49715 358 aaPredicted RBP33.31■■■□□ 2.92
CUEDC1-201ENST00000360238 SLC26A8Q96RN1 970 aa33.31■■■□□ 2.92
CUEDC1-201ENST00000360238 TTC21AQ8NDW8 1320 aa33.3■■■□□ 2.92
CUEDC1-201ENST00000360238 ZBTB7BO15156 539 aaPredicted RBP33.28■■■□□ 2.92
CUEDC1-201ENST00000360238 NUCB1Q02818 461 aa33.28■■■□□ 2.92
CUEDC1-201ENST00000360238 AMOTL2Q9Y2J4 779 aa33.28■■■□□ 2.92
CUEDC1-201ENST00000360238 RGPD8O14715 1765 aaPredicted RBP33.27■■■□□ 2.92
CUEDC1-201ENST00000360238 FAM83GA6ND36 823 aa33.27■■■□□ 2.92
CUEDC1-201ENST00000360238 SULT6B1Q6IMI4 303 aa33.27■■■□□ 2.92
CUEDC1-201ENST00000360238 AEBP1Q8IUX7 1158 aa33.26■■■□□ 2.92
CUEDC1-201ENST00000360238 C8orf58Q8NAV2 365 aa33.26■■■□□ 2.92
CUEDC1-201ENST00000360238 BCL11AQ9H165 835 aa33.26■■■□□ 2.92
CUEDC1-201ENST00000360238 API5Q9BZZ5 524 aaKnown RBP33.24■■■□□ 2.91
CUEDC1-201ENST00000360238 ARHGEF10O15013 1369 aa33.24■■■□□ 2.91
CUEDC1-201ENST00000360238 KIF24Q5T7B8 1368 aa33.24■■■□□ 2.91
CUEDC1-201ENST00000360238 NUTM2FA1L443 756 aa33.24■■■□□ 2.91
CUEDC1-201ENST00000360238 ELL2O00472 640 aaPredicted RBP33.23■■■□□ 2.91
CUEDC1-201ENST00000360238 HAP1P54257 671 aaPredicted RBP33.23■■■□□ 2.91
CUEDC1-201ENST00000360238 PIK3C2AO00443 1686 aa33.21■■■□□ 2.91
CUEDC1-201ENST00000360238 DCTN1Q14203 1278 aa33.21■■■□□ 2.91
CUEDC1-201ENST00000360238 GCC1Q96CN9 775 aa33.21■■■□□ 2.91
CUEDC1-201ENST00000360238 THEMISQ8N1K5 641 aaPredicted RBP33.2■■■□□ 2.91
CUEDC1-201ENST00000360238 CHD1LQ86WJ1 897 aa33.2■■■□□ 2.9
CUEDC1-201ENST00000360238 HSP90AB2PQ58FF8 381 aa33.19■■■□□ 2.9
CUEDC1-201ENST00000360238 KIAA0232Q92628 1395 aa33.19■■■□□ 2.9
CUEDC1-201ENST00000360238 SBNO1A3KN83 1393 aa33.19■■■□□ 2.9
CUEDC1-201ENST00000360238 ANKARQ7Z5J8 1434 aa33.18■■■□□ 2.9
CUEDC1-201ENST00000360238 USP54Q70EL1 1684 aa33.18■■■□□ 2.9
CUEDC1-201ENST00000360238 FLT4P35916 1363 aa33.17■■■□□ 2.9
CUEDC1-201ENST00000360238 CHL1O00533 1208 aa33.17■■■□□ 2.9
CUEDC1-201ENST00000360238 MAP3K19Q56UN5 1328 aa33.15■■■□□ 2.9
CUEDC1-201ENST00000360238 LNPKQ9C0E8 428 aa33.14■■■□□ 2.9
CUEDC1-201ENST00000360238 KDRP35968 1356 aa33.13■■■□□ 2.89
CUEDC1-201ENST00000360238 C22orf23Q9BZE7 217 aa33.13■■■□□ 2.89
CUEDC1-201ENST00000360238 CRB1P82279 1406 aa33.12■■■□□ 2.89
CUEDC1-201ENST00000360238 MARF1Q9Y4F3 1742 aaKnown RBP33.11■■■□□ 2.89
CUEDC1-201ENST00000360238 NGDNQ8NEJ9 315 aaKnown RBP33.11■■■□□ 2.89
CUEDC1-201ENST00000360238 C1orf115Q9H7X2 142 aa33.1■■■□□ 2.89
CUEDC1-201ENST00000360238 MFAP1P55081 439 aaKnown RBP33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 BMP2KLQ5H9B9 411 aa33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 TBC1D2Q9BYX2 928 aa33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 RGS12O14924 1447 aa33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 CEP170BQ9Y4F5 1589 aaPredicted RBP33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 MCM10Q7L590 875 aa33.09■■■□□ 2.89
CUEDC1-201ENST00000360238 INTS3Q68E01 1043 aaKnown RBP33.08■■■□□ 2.89
CUEDC1-201ENST00000360238 SIRT2Q8IXJ6 389 aa33.07■■■□□ 2.89
CUEDC1-201ENST00000360238 FRAT2O75474 233 aaPredicted RBP33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms