RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NGDNQ8NEJ9 315 aaKnown RBP23.53■■□□□ 1.36
PDLIM7-203ENST00000359895 PANK1Q8TE04 598 aa23.53■■□□□ 1.36
PDLIM7-203ENST00000359895 CLUAP1Q96AJ1 413 aa23.53■■□□□ 1.36
PDLIM7-203ENST00000359895 ZKSCAN2Q63HK3 967 aa23.52■■□□□ 1.36
PDLIM7-203ENST00000359895 PHACTR3Q96KR7 559 aa23.52■■□□□ 1.36
PDLIM7-203ENST00000359895 COG6Q9Y2V7 657 aa23.52■■□□□ 1.36
PDLIM7-203ENST00000359895 PIK3C2AO00443 1686 aa23.51■■□□□ 1.35
PDLIM7-203ENST00000359895 PMFBP1Q8TBY8 1022 aa23.51■■□□□ 1.35
PDLIM7-203ENST00000359895 ZNF428Q96B54 188 aa23.51■■□□□ 1.35
PDLIM7-203ENST00000359895 PDE4AP27815 886 aa23.48■■□□□ 1.35
PDLIM7-203ENST00000359895 BCL2L13Q9BXK5 485 aa23.48■■□□□ 1.35
PDLIM7-203ENST00000359895 SMC4Q9NTJ3 1288 aa23.48■■□□□ 1.35
PDLIM7-203ENST00000359895 GNAI1P63096 354 aa23.48■■□□□ 1.35
PDLIM7-203ENST00000359895 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
PDLIM7-203ENST00000359895 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
PDLIM7-203ENST00000359895 IFT57Q9NWB7 429 aa23.47■■□□□ 1.35
PDLIM7-203ENST00000359895 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
PDLIM7-203ENST00000359895 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-203ENST00000359895 SBNO1A3KN83 1393 aa23.45■■□□□ 1.34
PDLIM7-203ENST00000359895 MARF1Q9Y4F3 1742 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-203ENST00000359895 KIF16BQ96L93 1317 aa23.45■■□□□ 1.34
PDLIM7-203ENST00000359895 ANP32AP39687 249 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 SSH1Q8WYL5 1049 aa23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 RLBP1P12271 317 aa23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 FTSJ3Q8IY81 847 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 FLT4P35916 1363 aa23.44■■□□□ 1.34
PDLIM7-203ENST00000359895 NPHP4O75161 1426 aaPredicted RBP23.43■■□□□ 1.34
PDLIM7-203ENST00000359895 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
PDLIM7-203ENST00000359895 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
PDLIM7-203ENST00000359895 KIF24Q5T7B8 1368 aa23.42■■□□□ 1.34
PDLIM7-203ENST00000359895 MSH5O43196 834 aa23.42■■□□□ 1.34
PDLIM7-203ENST00000359895 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
PDLIM7-203ENST00000359895 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-203ENST00000359895 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
PDLIM7-203ENST00000359895 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
PDLIM7-203ENST00000359895 MAP3K19Q56UN5 1328 aa23.41■■□□□ 1.34
PDLIM7-203ENST00000359895 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
PDLIM7-203ENST00000359895 TNNQ9UQP3 1299 aa23.4■■□□□ 1.34
PDLIM7-203ENST00000359895 LAS1LQ9Y4W2 734 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-203ENST00000359895 IGHDP01880 384 aa23.4■■□□□ 1.34
PDLIM7-203ENST00000359895 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
PDLIM7-203ENST00000359895 CFAP44Q96MT7 982 aa23.39■■□□□ 1.33
PDLIM7-203ENST00000359895 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
PDLIM7-203ENST00000359895 ANP32EQ9BTT0 268 aa23.38■■□□□ 1.33
PDLIM7-203ENST00000359895 TRIM27P14373 513 aa23.37■■□□□ 1.33
PDLIM7-203ENST00000359895 DDX19BQ9UMR2 479 aa23.37■■□□□ 1.33
PDLIM7-203ENST00000359895 VIRMAQ69YN4 1812 aaKnown RBP23.37■■□□□ 1.33
PDLIM7-203ENST00000359895 NLRP6P59044 892 aa23.36■■□□□ 1.33
PDLIM7-203ENST00000359895 AEBP1Q8IUX7 1158 aa23.36■■□□□ 1.33
PDLIM7-203ENST00000359895 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
PDLIM7-203ENST00000359895 PHF8Q9UPP1 1060 aa23.36■■□□□ 1.33
PDLIM7-203ENST00000359895 AMPHP49418 695 aa23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 THUMPD2Q9BTF0 503 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 RWDD1Q9H446 243 aaPredicted RBP23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 MBIPQ9NS73 344 aa23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 SKAP1Q86WV1 359 aa23.35■■□□□ 1.33
PDLIM7-203ENST00000359895 SOX12O15370 315 aa23.34■■□□□ 1.33
PDLIM7-203ENST00000359895 VAMP4O75379 141 aa23.34■■□□□ 1.33
PDLIM7-203ENST00000359895 ILDR1Q86SU0 546 aaPredicted RBP23.33■■□□□ 1.33
PDLIM7-203ENST00000359895 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.33
PDLIM7-203ENST00000359895 KDRP35968 1356 aa23.33■■□□□ 1.33
PDLIM7-203ENST00000359895 LTN1O94822 1766 aa23.32■■□□□ 1.32
PDLIM7-203ENST00000359895 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
PDLIM7-203ENST00000359895 ARHGAP45Q92619 1136 aa23.32■■□□□ 1.32
PDLIM7-203ENST00000359895 IPO9Q96P70 1041 aaKnown RBP23.32■■□□□ 1.32
PDLIM7-203ENST00000359895 HAP1P54257 671 aaPredicted RBP23.31■■□□□ 1.32
PDLIM7-203ENST00000359895 ABTB2Q8N961 1025 aa23.31■■□□□ 1.32
PDLIM7-203ENST00000359895 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
PDLIM7-203ENST00000359895 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
PDLIM7-203ENST00000359895 RGS3P49796 1198 aa23.3■■□□□ 1.32
PDLIM7-203ENST00000359895 TWISTNBQ3B726 338 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-203ENST00000359895 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
PDLIM7-203ENST00000359895 CHMP4BQ9H444 224 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-203ENST00000359895 FAM83GA6ND36 823 aa23.29■■□□□ 1.32
PDLIM7-203ENST00000359895 MYT1Q01538 1121 aa23.29■■□□□ 1.32
PDLIM7-203ENST00000359895 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
PDLIM7-203ENST00000359895 PAK3O75914 559 aaPredicted RBP23.27■■□□□ 1.32
PDLIM7-203ENST00000359895 HOXC9P31274 260 aa23.27■■□□□ 1.32
PDLIM7-203ENST00000359895 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
PDLIM7-203ENST00000359895 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
PDLIM7-203ENST00000359895 DCTN1Q14203 1278 aa23.26■■□□□ 1.31
PDLIM7-203ENST00000359895 TSPYL6Q8N831 410 aa23.26■■□□□ 1.31
PDLIM7-203ENST00000359895 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
PDLIM7-203ENST00000359895 KIAA0232Q92628 1395 aa23.26■■□□□ 1.31
PDLIM7-203ENST00000359895 STRCP1A6NGW2 1772 aa23.25■■□□□ 1.31
PDLIM7-203ENST00000359895 PHRF1Q9P1Y6 1649 aaKnown RBP23.25■■□□□ 1.31
PDLIM7-203ENST00000359895 CHL1O00533 1208 aa23.25■■□□□ 1.31
PDLIM7-203ENST00000359895 HDAC1Q13547 482 aaPredicted RBP23.25■■□□□ 1.31
PDLIM7-203ENST00000359895 EYA1Q99502 592 aa23.25■■□□□ 1.31
PDLIM7-203ENST00000359895 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
PDLIM7-203ENST00000359895 C8orf34Q49A92 452 aa23.24■■□□□ 1.31
PDLIM7-203ENST00000359895 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
PDLIM7-203ENST00000359895 PSME1Q06323 249 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 ESCO1Q5FWF5 840 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 ZNF335Q9H4Z2 1342 aaPredicted RBP23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 NFAT5O94916 1531 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms