RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 RABEP1Q15276 862 aa12.29□□□□□ -0.44
TRAPPC2-201ENST00000359680 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC2-201ENST00000359680 ZNF445P59923 1031 aa12.28□□□□□ -0.44
TRAPPC2-201ENST00000359680 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2-201ENST00000359680 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.44
TRAPPC2-201ENST00000359680 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.44
TRAPPC2-201ENST00000359680 HS1BP3Q53T59 392 aa12.27□□□□□ -0.45
TRAPPC2-201ENST00000359680 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
TRAPPC2-201ENST00000359680 NPATQ14207 1427 aa12.27□□□□□ -0.45
TRAPPC2-201ENST00000359680 TERF1P54274 439 aa12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 ZSCAN23Q3MJ62 389 aa12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 KIDINS220Q9ULH0 1771 aa12.26□□□□□ -0.45
TRAPPC2-201ENST00000359680 FYB1O15117 783 aa12.25□□□□□ -0.45
TRAPPC2-201ENST00000359680 FCHSD2O94868 740 aa12.25□□□□□ -0.45
TRAPPC2-201ENST00000359680 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
TRAPPC2-201ENST00000359680 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
TRAPPC2-201ENST00000359680 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
TRAPPC2-201ENST00000359680 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 VAMP4O75379 141 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 GGT6Q6P531 493 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 LMBRD1Q9NUN5 540 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 R3HCC1Q9Y3T6 440 aaKnown RBP12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
TRAPPC2-201ENST00000359680 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 ABCC4O15439 1325 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 ST18O60284 1047 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 CYP2E1P05181 493 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 RBM10P98175 930 aaKnown RBP12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 STK26Q9P289 416 aa12.23□□□□□ -0.45
TRAPPC2-201ENST00000359680 ZFYVE9O95405 1425 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 PNPLA6Q8IY17 1366 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 ZNF500O60304 480 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 GNAI1P63096 354 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 CASC1Q6TDU7 716 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 ELL2O00472 640 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 PDLIM2Q96JY6 352 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 API5Q9BZZ5 524 aaKnown RBP12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 FAM135BQ49AJ0 1406 aa12.22□□□□□ -0.45
TRAPPC2-201ENST00000359680 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
TRAPPC2-201ENST00000359680 NFE2L2Q16236 605 aa12.21□□□□□ -0.45
TRAPPC2-201ENST00000359680 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
TRAPPC2-201ENST00000359680 PKP1Q13835 747 aa12.21□□□□□ -0.46
TRAPPC2-201ENST00000359680 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.46
TRAPPC2-201ENST00000359680 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 CDC42BPGQ6DT37 1551 aa12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC2-201ENST00000359680 NEXMIFQ5QGS0 1516 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 UQCRHLA0A096LP55 91 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 UQCRHP07919 91 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 ZKSCAN5Q9Y2L8 839 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 HMOX1P09601 288 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 MCM5P33992 734 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 KIF20BQ96Q89 1820 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 HECW2Q9P2P5 1572 aa12.19□□□□□ -0.46
TRAPPC2-201ENST00000359680 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 GPT2Q8TD30 523 aa12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 PHACTR3Q96KR7 559 aa12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 CD163L1Q9NR16 1453 aa12.18□□□□□ -0.46
TRAPPC2-201ENST00000359680 REC8O95072 547 aa12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 SYCE3A1L190 88 aa12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 ABCC3O15438 1527 aa12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 PRAM1Q96QH2 718 aa12.17□□□□□ -0.46
TRAPPC2-201ENST00000359680 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 MBD3O95983 291 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 SDSP20132 328 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 MTERF4Q7Z6M4 381 aaKnown RBP12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
TRAPPC2-201ENST00000359680 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms