RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LMTK2Q8IWU2 1503 aa13.87□□□□□ -0.19
SSU72-202ENST00000359060 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
SSU72-202ENST00000359060 EIF4A2Q14240 407 aaKnown RBP13.86□□□□□ -0.19
SSU72-202ENST00000359060 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
SSU72-202ENST00000359060 TEFQ10587 303 aa13.86□□□□□ -0.19
SSU72-202ENST00000359060 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
SSU72-202ENST00000359060 GAS2L2Q8NHY3 880 aa13.86□□□□□ -0.19
SSU72-202ENST00000359060 RILPL2Q969X0 211 aa13.86□□□□□ -0.19
SSU72-202ENST00000359060 TBC1D2Q9BYX2 928 aa13.86□□□□□ -0.19
SSU72-202ENST00000359060 GLI2P10070 1586 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 IL13P35225 146 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 VWDEQ8N2E2 1590 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 TBC1D32Q96NH3 1257 aa13.85□□□□□ -0.19
SSU72-202ENST00000359060 METP08581 1390 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 ZFYVE9O95405 1425 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 DEPDC5O75140 1603 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 MRPL50Q8N5N7 158 aaKnown RBP13.84□□□□□ -0.19
SSU72-202ENST00000359060 F6X3S4 739 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 CDC45O75419 566 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 ARHGAP31Q2M1Z3 1444 aa13.84□□□□□ -0.19
SSU72-202ENST00000359060 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
SSU72-202ENST00000359060 L1TD1Q5T7N2 865 aaKnown RBP13.83□□□□□ -0.2
SSU72-202ENST00000359060 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
SSU72-202ENST00000359060 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
SSU72-202ENST00000359060 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
SSU72-202ENST00000359060 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
SSU72-202ENST00000359060 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
SSU72-202ENST00000359060 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
SSU72-202ENST00000359060 FOXO3O43524 673 aa13.82□□□□□ -0.2
SSU72-202ENST00000359060 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
SSU72-202ENST00000359060 MCCP23508 829 aa13.82□□□□□ -0.2
SSU72-202ENST00000359060 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
SSU72-202ENST00000359060 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 FOXD4L5Q5VV16 416 aaPredicted RBP13.81□□□□□ -0.2
SSU72-202ENST00000359060 FOXD4L4Q8WXT5 416 aaPredicted RBP13.81□□□□□ -0.2
SSU72-202ENST00000359060 GOLGA6L3A6NEY3 463 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 EDC4Q6P2E9 1401 aaKnown RBP13.81□□□□□ -0.2
SSU72-202ENST00000359060 LTKP29376 864 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 NUCB1Q02818 461 aa13.81□□□□□ -0.2
SSU72-202ENST00000359060 TRIM44Q96DX7 344 aaPredicted RBP13.81□□□□□ -0.2
SSU72-202ENST00000359060 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
SSU72-202ENST00000359060 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
SSU72-202ENST00000359060 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
SSU72-202ENST00000359060 C1orf141Q5JVX7 400 aa13.8□□□□□ -0.2
SSU72-202ENST00000359060 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
SSU72-202ENST00000359060 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 KCNJ4P48050 445 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 ARHGAP45Q92619 1136 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 A0A0G2JS52 829 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 ST18O60284 1047 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
SSU72-202ENST00000359060 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
SSU72-202ENST00000359060 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
SSU72-202ENST00000359060 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
SSU72-202ENST00000359060 GNAI2P04899 355 aa13.78□□□□□ -0.2
SSU72-202ENST00000359060 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.2
SSU72-202ENST00000359060 REC8O95072 547 aa13.77□□□□□ -0.2
SSU72-202ENST00000359060 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.2
SSU72-202ENST00000359060 RPAP2Q8IXW5 612 aaPredicted RBP13.77□□□□□ -0.2
SSU72-202ENST00000359060 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
SSU72-202ENST00000359060 MEIS3Q99687 375 aa13.77□□□□□ -0.21
SSU72-202ENST00000359060 NEXMIFQ5QGS0 1516 aa13.77□□□□□ -0.21
SSU72-202ENST00000359060 GNAT3A8MTJ3 354 aa13.77□□□□□ -0.21
SSU72-202ENST00000359060 ANO2Q9NQ90 1003 aa13.77□□□□□ -0.21
SSU72-202ENST00000359060 GNAI3P08754 354 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
SSU72-202ENST00000359060 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
SSU72-202ENST00000359060 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
SSU72-202ENST00000359060 C16orf71Q8IYS4 520 aaPredicted RBP13.75□□□□□ -0.21
SSU72-202ENST00000359060 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
SSU72-202ENST00000359060 TRAK2O60296 914 aa13.75□□□□□ -0.21
SSU72-202ENST00000359060 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
SSU72-202ENST00000359060 CHMP4AQ9BY43 222 aa13.75□□□□□ -0.21
SSU72-202ENST00000359060 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
SSU72-202ENST00000359060 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
SSU72-202ENST00000359060 KCNA6P17658 529 aa13.74□□□□□ -0.21
SSU72-202ENST00000359060 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
SSU72-202ENST00000359060 ZNF530Q6P9A1 599 aaPredicted RBP13.74□□□□□ -0.21
SSU72-202ENST00000359060 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
SSU72-202ENST00000359060 EYA1Q99502 592 aa13.74□□□□□ -0.21
SSU72-202ENST00000359060 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
SSU72-202ENST00000359060 MCM4P33991 863 aa13.74□□□□□ -0.21
SSU72-202ENST00000359060 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
SSU72-202ENST00000359060 DDX49Q9Y6V7 483 aaKnown RBP13.74□□□□□ -0.21
SSU72-202ENST00000359060 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
SSU72-202ENST00000359060 MYOM1P52179 1685 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms