RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
GGPS1-202ENST00000358966 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
GGPS1-202ENST00000358966 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
GGPS1-202ENST00000358966 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
GGPS1-202ENST00000358966 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
GGPS1-202ENST00000358966 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
GGPS1-202ENST00000358966 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
GGPS1-202ENST00000358966 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
GGPS1-202ENST00000358966 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
GGPS1-202ENST00000358966 FOXO3O43524 673 aa16.43■□□□□ 0.22
GGPS1-202ENST00000358966 ANKARQ7Z5J8 1434 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 FCHSD2O94868 740 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
GGPS1-202ENST00000358966 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 TNNQ9UQP3 1299 aa16.41■□□□□ 0.22
GGPS1-202ENST00000358966 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
GGPS1-202ENST00000358966 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
GGPS1-202ENST00000358966 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
GGPS1-202ENST00000358966 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
GGPS1-202ENST00000358966 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
GGPS1-202ENST00000358966 CCDC27Q2M243 656 aa16.39■□□□□ 0.22
GGPS1-202ENST00000358966 WDR63Q8IWG1 891 aa16.39■□□□□ 0.22
GGPS1-202ENST00000358966 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.22
GGPS1-202ENST00000358966 USP31Q70CQ4 1352 aa16.39■□□□□ 0.21
GGPS1-202ENST00000358966 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
GGPS1-202ENST00000358966 STRCP1A6NGW2 1772 aa16.39■□□□□ 0.21
GGPS1-202ENST00000358966 PSME1Q06323 249 aa16.39■□□□□ 0.21
GGPS1-202ENST00000358966 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
GGPS1-202ENST00000358966 AMPHP49418 695 aa16.38■□□□□ 0.21
GGPS1-202ENST00000358966 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
GGPS1-202ENST00000358966 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
GGPS1-202ENST00000358966 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
GGPS1-202ENST00000358966 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
GGPS1-202ENST00000358966 NEFMP07197 916 aa16.35■□□□□ 0.21
GGPS1-202ENST00000358966 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
GGPS1-202ENST00000358966 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
GGPS1-202ENST00000358966 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
GGPS1-202ENST00000358966 DLG5Q8TDM6 1919 aa16.34■□□□□ 0.21
GGPS1-202ENST00000358966 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
GGPS1-202ENST00000358966 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
GGPS1-202ENST00000358966 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
GGPS1-202ENST00000358966 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.21
GGPS1-202ENST00000358966 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
GGPS1-202ENST00000358966 FLT4P35916 1363 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 EYA1Q99502 592 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 RLBP1P12271 317 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 HOXC9P31274 260 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
GGPS1-202ENST00000358966 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
GGPS1-202ENST00000358966 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
GGPS1-202ENST00000358966 TCERG1O14776 1098 aaKnown RBP16.31■□□□□ 0.2
GGPS1-202ENST00000358966 MCM10Q7L590 875 aa16.31■□□□□ 0.2
GGPS1-202ENST00000358966 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
GGPS1-202ENST00000358966 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
GGPS1-202ENST00000358966 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
GGPS1-202ENST00000358966 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
GGPS1-202ENST00000358966 ZNF335Q9H4Z2 1342 aaPredicted RBP16.29■□□□□ 0.2
GGPS1-202ENST00000358966 ATF3P18847 181 aa16.29■□□□□ 0.2
GGPS1-202ENST00000358966 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
GGPS1-202ENST00000358966 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
GGPS1-202ENST00000358966 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
GGPS1-202ENST00000358966 RGPD1P0DJD0 1748 aa16.27■□□□□ 0.2
GGPS1-202ENST00000358966 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
GGPS1-202ENST00000358966 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
GGPS1-202ENST00000358966 SMC4Q9NTJ3 1288 aa16.27■□□□□ 0.2
GGPS1-202ENST00000358966 LTN1O94822 1766 aa16.27■□□□□ 0.2
GGPS1-202ENST00000358966 MBIPQ9NS73 344 aa16.27■□□□□ 0.19
GGPS1-202ENST00000358966 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
GGPS1-202ENST00000358966 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
GGPS1-202ENST00000358966 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
GGPS1-202ENST00000358966 LRRC59Q96AG4 307 aaKnown RBP16.26■□□□□ 0.19
GGPS1-202ENST00000358966 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
GGPS1-202ENST00000358966 MST1RQ04912 1400 aa16.25■□□□□ 0.19
GGPS1-202ENST00000358966 GCP02774 474 aa16.24■□□□□ 0.19
GGPS1-202ENST00000358966 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
GGPS1-202ENST00000358966 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
GGPS1-202ENST00000358966 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
GGPS1-202ENST00000358966 NFAT5O94916 1531 aa16.23■□□□□ 0.19
GGPS1-202ENST00000358966 IL16Q14005 1332 aa16.23■□□□□ 0.19
GGPS1-202ENST00000358966 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
GGPS1-202ENST00000358966 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
GGPS1-202ENST00000358966 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
GGPS1-202ENST00000358966 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
GGPS1-202ENST00000358966 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
GGPS1-202ENST00000358966 RGPD2P0DJD1 1756 aa16.21■□□□□ 0.19
GGPS1-202ENST00000358966 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
GGPS1-202ENST00000358966 TRIM27P14373 513 aa16.21■□□□□ 0.19
GGPS1-202ENST00000358966 XIRP1Q702N8 1843 aaKnown RBP16.21■□□□□ 0.18
GGPS1-202ENST00000358966 VSIG10Q8N0Z9 540 aa16.2■□□□□ 0.18
GGPS1-202ENST00000358966 KDRP35968 1356 aa16.2■□□□□ 0.18
GGPS1-202ENST00000358966 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
GGPS1-202ENST00000358966 IFT57Q9NWB7 429 aa16.2■□□□□ 0.18
GGPS1-202ENST00000358966 TRPM3Q9HCF6 1732 aaPredicted RBP16.2■□□□□ 0.18
GGPS1-202ENST00000358966 GNAI1P63096 354 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
GGPS1-202ENST00000358966 IP6K1Q92551 441 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms