RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
SIRPA-202ENST00000358771 NLRP2Q9NX02 1062 aa17.59■□□□□ 0.41
SIRPA-202ENST00000358771 SYNMO15061 1565 aa17.59■□□□□ 0.41
SIRPA-202ENST00000358771 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
SIRPA-202ENST00000358771 MADDQ8WXG6 1647 aa17.58■□□□□ 0.41
SIRPA-202ENST00000358771 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.41
SIRPA-202ENST00000358771 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.41
SIRPA-202ENST00000358771 KIF1BO60333 1816 aa17.58■□□□□ 0.41
SIRPA-202ENST00000358771 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
SIRPA-202ENST00000358771 INSRP06213 1382 aa17.58■□□□□ 0.4
SIRPA-202ENST00000358771 VAMP4O75379 141 aa17.58■□□□□ 0.4
SIRPA-202ENST00000358771 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
SIRPA-202ENST00000358771 EXOC6BQ9Y2D4 811 aa17.58■□□□□ 0.4
SIRPA-202ENST00000358771 SPHKAPQ2M3C7 1700 aa17.58■□□□□ 0.4
SIRPA-202ENST00000358771 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
SIRPA-202ENST00000358771 ANO2Q9NQ90 1003 aa17.57■□□□□ 0.4
SIRPA-202ENST00000358771 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
SIRPA-202ENST00000358771 IL16Q14005 1332 aa17.57■□□□□ 0.4
SIRPA-202ENST00000358771 CDC45O75419 566 aa17.56■□□□□ 0.4
SIRPA-202ENST00000358771 CCDC30Q5VVM6 783 aa17.56■□□□□ 0.4
SIRPA-202ENST00000358771 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
SIRPA-202ENST00000358771 LTKP29376 864 aa17.56■□□□□ 0.4
SIRPA-202ENST00000358771 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
SIRPA-202ENST00000358771 ABCC3O15438 1527 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
SIRPA-202ENST00000358771 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 ST18O60284 1047 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 METP08581 1390 aa17.55■□□□□ 0.4
SIRPA-202ENST00000358771 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
SIRPA-202ENST00000358771 IL13P35225 146 aa17.54■□□□□ 0.4
SIRPA-202ENST00000358771 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
SIRPA-202ENST00000358771 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
SIRPA-202ENST00000358771 BRPF3Q9ULD4 1205 aa17.54■□□□□ 0.4
SIRPA-202ENST00000358771 HECW2Q9P2P5 1572 aa17.53■□□□□ 0.4
SIRPA-202ENST00000358771 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
SIRPA-202ENST00000358771 TSPOAP1O95153 1857 aa17.53■□□□□ 0.4
SIRPA-202ENST00000358771 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
SIRPA-202ENST00000358771 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
SIRPA-202ENST00000358771 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
SIRPA-202ENST00000358771 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
SIRPA-202ENST00000358771 FGD1P98174 961 aa17.53■□□□□ 0.4
SIRPA-202ENST00000358771 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
SIRPA-202ENST00000358771 GNAI2P04899 355 aa17.52■□□□□ 0.4
SIRPA-202ENST00000358771 KCNA6P17658 529 aa17.52■□□□□ 0.4
SIRPA-202ENST00000358771 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
SIRPA-202ENST00000358771 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
SIRPA-202ENST00000358771 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
SIRPA-202ENST00000358771 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.39
SIRPA-202ENST00000358771 REC8O95072 547 aa17.51■□□□□ 0.39
SIRPA-202ENST00000358771 PLCB2Q00722 1185 aa17.51■□□□□ 0.39
SIRPA-202ENST00000358771 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
SIRPA-202ENST00000358771 ABCA9Q8IUA7 1624 aa17.51■□□□□ 0.39
SIRPA-202ENST00000358771 MEIS3Q99687 375 aa17.51■□□□□ 0.39
SIRPA-202ENST00000358771 ANXA1P04083 346 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
SIRPA-202ENST00000358771 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 TSHZ3Q63HK5 1081 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 MTHFSDQ2M296 383 aaKnown RBP17.5■□□□□ 0.39
SIRPA-202ENST00000358771 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
SIRPA-202ENST00000358771 GNAI3P08754 354 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 ATF3P18847 181 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
SIRPA-202ENST00000358771 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
SIRPA-202ENST00000358771 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
SIRPA-202ENST00000358771 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
SIRPA-202ENST00000358771 CEP152O94986 1710 aa17.49■□□□□ 0.39
SIRPA-202ENST00000358771 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
SIRPA-202ENST00000358771 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
SIRPA-202ENST00000358771 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
SIRPA-202ENST00000358771 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
SIRPA-202ENST00000358771 EYA1Q99502 592 aa17.47■□□□□ 0.39
SIRPA-202ENST00000358771 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
SIRPA-202ENST00000358771 NUCB1Q02818 461 aa17.47■□□□□ 0.39
SIRPA-202ENST00000358771 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SIRPA-202ENST00000358771 PPRC1Q5VV67 1664 aaKnown RBP17.46■□□□□ 0.39
SIRPA-202ENST00000358771 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
SIRPA-202ENST00000358771 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
SIRPA-202ENST00000358771 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.38
SIRPA-202ENST00000358771 NEK4P51957 841 aa17.45■□□□□ 0.38
SIRPA-202ENST00000358771 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
SIRPA-202ENST00000358771 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
SIRPA-202ENST00000358771 FLIIQ13045 1269 aa17.45■□□□□ 0.38
SIRPA-202ENST00000358771 RIC3Q7Z5B4 369 aa17.45■□□□□ 0.38
SIRPA-202ENST00000358771 SMC5Q8IY18 1101 aa17.45■□□□□ 0.38
SIRPA-202ENST00000358771 INO80Q9ULG1 1556 aaPredicted RBP17.44■□□□□ 0.38
SIRPA-202ENST00000358771 BTBD11A6QL63 1104 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 SRCIN1Q9C0H9 1055 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 TRAK2O60296 914 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
SIRPA-202ENST00000358771 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
SIRPA-202ENST00000358771 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
SIRPA-202ENST00000358771 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
SIRPA-202ENST00000358771 MYL6BP14649 208 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 NEXNQ0ZGT2 675 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 DIAPH3Q9NSV4 1193 aa17.43■□□□□ 0.38
SIRPA-202ENST00000358771 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms