RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 LNPKQ9C0E8 428 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 PTCH1Q13635 1447 aa10.83□□□□□ -0.68
RFX3-202ENST00000358730 KNDC1Q76NI1 1749 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
RFX3-202ENST00000358730 GNAI1P63096 354 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 IFT57Q9NWB7 429 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 CPS1P31327 1500 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 TSPYL6Q8N831 410 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 COG3Q96JB2 828 aa10.82□□□□□ -0.68
RFX3-202ENST00000358730 NCKAP5LQ9HCH0 1330 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 ELL2O00472 640 aaPredicted RBP10.81□□□□□ -0.68
RFX3-202ENST00000358730 VAMP4O75379 141 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
RFX3-202ENST00000358730 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 MRPL50Q8N5N7 158 aaKnown RBP10.81□□□□□ -0.68
RFX3-202ENST00000358730 NUDT16Q96DE0 195 aaKnown RBP10.81□□□□□ -0.68
RFX3-202ENST00000358730 MBIPQ9NS73 344 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 AKAP12Q02952 1782 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 CHD1LQ86WJ1 897 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFX3-202ENST00000358730 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
RFX3-202ENST00000358730 C3P01024 1663 aa10.8□□□□□ -0.68
RFX3-202ENST00000358730 LMOD3Q0VAK6 560 aa10.8□□□□□ -0.68
RFX3-202ENST00000358730 PIK3R4Q99570 1358 aa10.8□□□□□ -0.68
RFX3-202ENST00000358730 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
RFX3-202ENST00000358730 TWISTNBQ3B726 338 aaPredicted RBP10.8□□□□□ -0.68
RFX3-202ENST00000358730 ARHGAP45Q92619 1136 aa10.8□□□□□ -0.68
RFX3-202ENST00000358730 CHMP4BQ9H444 224 aaKnown RBP10.8□□□□□ -0.68
RFX3-202ENST00000358730 ESF1Q9H501 851 aaKnown RBP10.8□□□□□ -0.68
RFX3-202ENST00000358730 ZBTB7BO15156 539 aaPredicted RBP10.79□□□□□ -0.68
RFX3-202ENST00000358730 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
RFX3-202ENST00000358730 TECPR2O15040 1411 aa10.79□□□□□ -0.68
RFX3-202ENST00000358730 ABCC4O15439 1325 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 FAM83GA6ND36 823 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 HSCBQ8IWL3 235 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 NRKQ7Z2Y5 1582 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 ANKRD45Q5TZF3 282 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 GCC1Q96CN9 775 aa10.78□□□□□ -0.68
RFX3-202ENST00000358730 DCTN1Q14203 1278 aa10.77□□□□□ -0.69
RFX3-202ENST00000358730 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
RFX3-202ENST00000358730 C8orf58Q8NAV2 365 aa10.77□□□□□ -0.69
RFX3-202ENST00000358730 PRR36Q9H6K5 1346 aa10.77□□□□□ -0.69
RFX3-202ENST00000358730 RBM25P49756 843 aaKnown RBP10.76□□□□□ -0.69
RFX3-202ENST00000358730 HDGFP51858 240 aaKnown RBP10.76□□□□□ -0.69
RFX3-202ENST00000358730 API5Q9BZZ5 524 aaKnown RBP10.76□□□□□ -0.69
RFX3-202ENST00000358730 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
RFX3-202ENST00000358730 TNRQ92752 1358 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 ROBO2Q9HCK4 1378 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 SIRT2Q8IXJ6 389 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 SIRT1Q96EB6 747 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
RFX3-202ENST00000358730 UBR1Q8IWV7 1749 aa10.75□□□□□ -0.69
RFX3-202ENST00000358730 MCM4P33991 863 aa10.74□□□□□ -0.69
RFX3-202ENST00000358730 EIF4A2Q14240 407 aaKnown RBP10.74□□□□□ -0.69
RFX3-202ENST00000358730 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
RFX3-202ENST00000358730 TMEM2Q9UHN6 1383 aa10.74□□□□□ -0.69
RFX3-202ENST00000358730 TOPAZ1Q8N9V7 1692 aa10.74□□□□□ -0.69
RFX3-202ENST00000358730 NCOA3Q9Y6Q9 1424 aa10.73□□□□□ -0.69
RFX3-202ENST00000358730 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
RFX3-202ENST00000358730 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
RFX3-202ENST00000358730 TTC21BQ7Z4L5 1316 aa10.73□□□□□ -0.69
RFX3-202ENST00000358730 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
RFX3-202ENST00000358730 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
RFX3-202ENST00000358730 TBC1D9Q6ZT07 1266 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 SNX21Q969T3 373 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 ACEP12821 1306 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 ADAMTS13Q76LX8 1427 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 NALCNQ8IZF0 1738 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 PEAK1Q9H792 1746 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
RFX3-202ENST00000358730 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
RFX3-202ENST00000358730 KRT24Q2M2I5 525 aa10.71□□□□□ -0.69
RFX3-202ENST00000358730 KIF24Q5T7B8 1368 aa10.71□□□□□ -0.69
RFX3-202ENST00000358730 USP6P35125 1406 aa10.71□□□□□ -0.69
RFX3-202ENST00000358730 L1TD1Q5T7N2 865 aaKnown RBP10.71□□□□□ -0.69
RFX3-202ENST00000358730 MCM10Q7L590 875 aa10.71□□□□□ -0.69
RFX3-202ENST00000358730 ARXQ96QS3 562 aa10.71□□□□□ -0.69
RFX3-202ENST00000358730 SOX12O15370 315 aa10.71□□□□□ -0.7
RFX3-202ENST00000358730 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
RFX3-202ENST00000358730 GZF1Q9H116 711 aaPredicted RBP10.7□□□□□ -0.7
RFX3-202ENST00000358730 RGPD1P0DJD0 1748 aa10.7□□□□□ -0.7
RFX3-202ENST00000358730 RGS12O14924 1447 aa10.7□□□□□ -0.7
RFX3-202ENST00000358730 CDC45O75419 566 aa10.7□□□□□ -0.7
RFX3-202ENST00000358730 ATP10DQ9P241 1426 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 MSH6P52701 1360 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 HSP90AB2PQ58FF8 381 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 INTS3Q68E01 1043 aaKnown RBP10.69□□□□□ -0.7
RFX3-202ENST00000358730 KIF2CQ99661 725 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 DDX11L8A8MPP1 907 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 CHL1O00533 1208 aa10.69□□□□□ -0.7
RFX3-202ENST00000358730 HSP90AA1P07900 732 aaKnown RBP10.69□□□□□ -0.7
RFX3-202ENST00000358730 TRAK2O60296 914 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 GSPT1P15170 499 aaKnown RBP10.68□□□□□ -0.7
RFX3-202ENST00000358730 DDIT3P35638 169 aa10.68□□□□□ -0.7
RFX3-202ENST00000358730 KIAA0232Q92628 1395 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms