RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 SLC26A8Q96RN1 970 aa10.47□□□□□ -0.73
CTNND1-201ENST00000358694 GNAI3P08754 354 aa10.47□□□□□ -0.73
CTNND1-201ENST00000358694 ME1P48163 572 aa10.47□□□□□ -0.73
CTNND1-201ENST00000358694 CA8P35219 290 aa10.47□□□□□ -0.73
CTNND1-201ENST00000358694 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 NFKBIBQ15653 356 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 ABTB2Q8N961 1025 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 PPP1R12BO60237 982 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 CABP4P57796 275 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 ZNF428Q96B54 188 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 DDX23Q9BUQ8 820 aaKnown RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 CAVIN1Q6NZI2 390 aaKnown RBP10.46□□□□□ -0.73
CTNND1-201ENST00000358694 BICDL1Q6ZP65 573 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 RAI14Q9P0K7 980 aa10.46□□□□□ -0.73
CTNND1-201ENST00000358694 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.74
CTNND1-201ENST00000358694 CCDC113Q9H0I3 377 aa10.46□□□□□ -0.74
CTNND1-201ENST00000358694 RAB3GAP2Q9H2M9 1393 aa10.46□□□□□ -0.74
CTNND1-201ENST00000358694 UBAC1Q9BSL1 405 aa10.46□□□□□ -0.74
CTNND1-201ENST00000358694 NACADO15069 1562 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 TDO2P48775 406 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 NEK4P51957 841 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
CTNND1-201ENST00000358694 LRRCC1Q9C099 1032 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 CBFA2T2O43439 604 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 TOM1L2Q6ZVM7 507 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 KIAA1328Q86T90 577 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 SIL1Q9H173 461 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
CTNND1-201ENST00000358694 PIP4K2BP78356 416 aa10.45□□□□□ -0.74
CTNND1-201ENST00000358694 DHX8Q14562 1220 aaKnown RBP10.45□□□□□ -0.74
CTNND1-201ENST00000358694 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 MTERF4Q7Z6M4 381 aaKnown RBP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 PROSER2Q86WR7 435 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 CEP57L1Q8IYX8 460 aa10.44□□□□□ -0.74
CTNND1-201ENST00000358694 MBD3O95983 291 aa10.44□□□□□ -0.74
CTNND1-201ENST00000358694 CCDC150Q8NCX0 1101 aa10.44□□□□□ -0.74
CTNND1-201ENST00000358694 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
CTNND1-201ENST00000358694 SMG6Q86US8 1419 aaKnown RBP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 CTNNBL1Q8WYA6 563 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-201ENST00000358694 TNMDQ9H2S6 317 aa10.44□□□□□ -0.74
CTNND1-201ENST00000358694 GSTTP1A0A1W2PQM5 241 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 CRACR2BQ8N4Y2 399 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-201ENST00000358694 TTC16Q8NEE8 873 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 GIMAP7Q8NHV1 300 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 SSX2IPQ9Y2D8 614 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 CDKL5O76039 1030 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 UBE4AQ14139 1066 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 HOOK3Q86VS8 718 aa10.43□□□□□ -0.74
CTNND1-201ENST00000358694 KANK4Q5T7N3 995 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-201ENST00000358694 ZNF397Q8NF99 534 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-201ENST00000358694 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-201ENST00000358694 LIG1P18858 919 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 MRE11P49959 708 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 ANKRD1Q15327 319 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 LRP2BPQ9P2M1 347 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 MACROD2A1Z1Q3 448 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 FERMT2Q96AC1 680 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 CCDC192P0DO97 292 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 FEZ1Q99689 392 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 UBA5Q9GZZ9 404 aa10.42□□□□□ -0.74
CTNND1-201ENST00000358694 MYL6BP14649 208 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
CTNND1-201ENST00000358694 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
CTNND1-201ENST00000358694 MIA2Q96PC5 1412 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 CTNNA2P26232 953 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 USP8P40818 1118 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 MCM2P49736 904 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 LARP1Q6PKG0 1096 aaKnown RBP10.41□□□□□ -0.74
CTNND1-201ENST00000358694 FERP16591 822 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 ANKRD18BA2A2Z9 1011 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 MAP4K4O95819 1239 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-201ENST00000358694 SMC1AQ14683 1233 aaKnown RBP10.41□□□□□ -0.74
CTNND1-201ENST00000358694 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
CTNND1-201ENST00000358694 DHX57Q6P158 1386 aaKnown RBP10.4□□□□□ -0.74
CTNND1-201ENST00000358694 PANK1Q8TE04 598 aa10.4□□□□□ -0.74
CTNND1-201ENST00000358694 GNAI2P04899 355 aa10.4□□□□□ -0.74
CTNND1-201ENST00000358694 IGHMBP2P38935 993 aaKnown RBP10.4□□□□□ -0.74
CTNND1-201ENST00000358694 CCDC148Q8NFR7 591 aa10.4□□□□□ -0.74
CTNND1-201ENST00000358694 SPATA24Q86W54 205 aa10.4□□□□□ -0.74
CTNND1-201ENST00000358694 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
CTNND1-201ENST00000358694 POLR3DP05423 398 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-201ENST00000358694 FAM69CQ0P6D2 419 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 CCDC18Q5T9S5 1454 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 WASF1Q92558 559 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
CTNND1-201ENST00000358694 SPA17Q15506 151 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 TSG101Q99816 390 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 ARHGAP29Q52LW3 1261 aa10.39□□□□□ -0.75
CTNND1-201ENST00000358694 ZNF287Q9HBT7 754 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms