RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RRP9O43818 475 aaKnown RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 SLC4A2P04920 1241 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 RBM25P49756 843 aaKnown RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 F6X3S4 739 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 ZBTB7BO15156 539 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 VAMP4O75379 141 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 PKP1Q13835 747 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 SNX21Q969T3 373 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 STK31Q9BXU1 1019 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 UPF3BQ9BZI7 483 aaKnown RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 MAP4K4O95819 1239 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 ZNF428Q96B54 188 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
CSDE1-203ENST00000358528 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-203ENST00000358528 KCNJ4P48050 445 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 TXNDC2Q86VQ3 553 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 LARP6Q9BRS8 491 aaKnown RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 ABCC11Q96J66 1382 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 IQGAP3Q86VI3 1631 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 TAOK2Q9UL54 1235 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 KIAA2012Q0VF49 1180 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 FKBP5Q13451 457 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 DTNBO60941 627 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
CSDE1-203ENST00000358528 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
CSDE1-203ENST00000358528 MADDQ8WXG6 1647 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 TPM2P07951 284 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 SDSP20132 328 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 KLHL40Q2TBA0 621 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 TSPYL4Q9UJ04 414 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 CLTCL1P53675 1640 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-203ENST00000358528 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-203ENST00000358528 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 UNC13BO14795 1591 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 NCKAP5LQ9HCH0 1330 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 PLEKHM2Q8IWE5 1019 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 PLEKHF1Q96S99 279 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 MEIS3Q99687 375 aa8.02□□□□□ -1.13
CSDE1-203ENST00000358528 ERCC6L2Q5T890 1561 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 UQCRHLA0A096LP55 91 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 ERC2O15083 957 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 UQCRHP07919 91 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 TTC22Q5TAA0 569 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 SYAP1Q96A49 352 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-203ENST00000358528 RPGRIP1LQ68CZ1 1315 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 ZNF518AQ6AHZ1 1483 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 IL1RAPL2Q9NP60 686 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 IL16Q14005 1332 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 AEBP1Q8IUX7 1158 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 RBSNQ9H1K0 784 aa8.01□□□□□ -1.13
CSDE1-203ENST00000358528 TRPM2O94759 1503 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 GSPT1P15170 499 aaKnown RBP8□□□□□ -1.13
CSDE1-203ENST00000358528 EIF2S2P20042 333 aaKnown RBP8□□□□□ -1.13
CSDE1-203ENST00000358528 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 IFT57Q9NWB7 429 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 AMPHP49418 695 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 DRC7Q8IY82 874 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 SIRT2Q8IXJ6 389 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 NSD2O96028 1365 aa8□□□□□ -1.13
CSDE1-203ENST00000358528 CLASP1Q7Z460 1538 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
CSDE1-203ENST00000358528 ZNF830Q96NB3 372 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-203ENST00000358528 FIBPO43427 364 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 ZNF692Q9BU19 519 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-203ENST00000358528 PPIP5K1Q6PFW1 1433 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 NLRP1Q9C000 1473 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 GOLGA6L4A6NEF3 574 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 CWC22Q9HCG8 908 aaKnown RBP7.99□□□□□ -1.13
CSDE1-203ENST00000358528 PRDM10Q9NQV6 1147 aa7.99□□□□□ -1.13
CSDE1-203ENST00000358528 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 TSPY26PQ9H489 355 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 VPS37CA5D8V6 355 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-203ENST00000358528 RPAP2Q8IXW5 612 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-203ENST00000358528 CCDC39Q9UFE4 941 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 NAP1L2Q9ULW6 460 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-203ENST00000358528 CD109Q6YHK3 1445 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 RTEL1-TNFRSF6BF6WH68 1400 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 LAMC1P11047 1609 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 TMX3Q96JJ7 454 aa7.98□□□□□ -1.13
CSDE1-203ENST00000358528 LMOD2Q6P5Q4 547 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 SPC24Q8NBT2 197 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 NGDNQ8NEJ9 315 aaKnown RBP7.97□□□□□ -1.13
CSDE1-203ENST00000358528 KIF2CQ99661 725 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 DCTPP1Q9H773 170 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 SURF6O75683 361 aaKnown RBP7.97□□□□□ -1.13
CSDE1-203ENST00000358528 MBD3O95983 291 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 LMBRD1Q9NUN5 540 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 SLC52A1Q9NWF4 448 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 ABCC1P33527 1531 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 PHF14O94880 888 aa7.97□□□□□ -1.13
CSDE1-203ENST00000358528 GNAI2P04899 355 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms