RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 DESP17661 470 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 LETM1O95202 739 aaPredicted RBP12.45□□□□□ -0.42
FXR1-202ENST00000357559 CTNNBL1Q8WYA6 563 aaPredicted RBP12.45□□□□□ -0.42
FXR1-202ENST00000357559 INCENPQ9NQS7 918 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 ABTB2Q8N961 1025 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
FXR1-202ENST00000357559 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
FXR1-202ENST00000357559 GNL3LQ9NVN8 582 aaKnown RBP12.44□□□□□ -0.42
FXR1-202ENST00000357559 UBA5Q9GZZ9 404 aa12.44□□□□□ -0.42
FXR1-202ENST00000357559 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 USP47Q96K76 1375 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 UQCRHP07919 91 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
FXR1-202ENST00000357559 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
FXR1-202ENST00000357559 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
FXR1-202ENST00000357559 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 UACAQ9BZF9 1416 aa12.43□□□□□ -0.42
FXR1-202ENST00000357559 TDO2P48775 406 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 CAMK4Q16566 473 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 RABEP1Q15276 862 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 GNAI1P63096 354 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
FXR1-202ENST00000357559 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
FXR1-202ENST00000357559 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
FXR1-202ENST00000357559 MPHOSPH8Q99549 860 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 MRE11P49959 708 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 NLRP6P59044 892 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
FXR1-202ENST00000357559 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
FXR1-202ENST00000357559 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
FXR1-202ENST00000357559 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 EIF3JO75822 258 aaKnown RBP12.4□□□□□ -0.42
FXR1-202ENST00000357559 CCDC192P0DO97 292 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 TRIM21P19474 475 aaKnown RBP12.4□□□□□ -0.42
FXR1-202ENST00000357559 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
FXR1-202ENST00000357559 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 KIF7Q2M1P5 1343 aa12.4□□□□□ -0.42
FXR1-202ENST00000357559 PIP4K2AP48426 406 aaPredicted RBP12.39□□□□□ -0.43
FXR1-202ENST00000357559 CABP4P57796 275 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 STAMBPO95630 424 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 KLHL10Q6JEL2 608 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 TAF4BQ92750 862 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.39□□□□□ -0.43
FXR1-202ENST00000357559 GSTTP1A0A1W2PQM5 241 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 DRC1Q96MC2 740 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 RAI14Q9P0K7 980 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
FXR1-202ENST00000357559 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 NOB1Q9ULX3 412 aaKnown RBP12.39□□□□□ -0.43
FXR1-202ENST00000357559 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
FXR1-202ENST00000357559 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
FXR1-202ENST00000357559 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
FXR1-202ENST00000357559 CCDC18Q5T9S5 1454 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 EPB41L2O43491 1005 aaKnown RBP12.38□□□□□ -0.43
FXR1-202ENST00000357559 TMEM132EQ6IEE7 984 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 ERLIN1O75477 346 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 TMCO3Q6UWJ1 677 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
FXR1-202ENST00000357559 LARP1BQ659C4 914 aaKnown RBP12.37□□□□□ -0.43
FXR1-202ENST00000357559 TERF1P54274 439 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
FXR1-202ENST00000357559 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
FXR1-202ENST00000357559 NOL7Q9UMY1 257 aaKnown RBP12.37□□□□□ -0.43
FXR1-202ENST00000357559 TOM1L2Q6ZVM7 507 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 LRP2BPQ9P2M1 347 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 PDCP20941 246 aa12.37□□□□□ -0.43
FXR1-202ENST00000357559 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
FXR1-202ENST00000357559 HIP1O00291 1037 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 SPATA32Q96LK8 384 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
FXR1-202ENST00000357559 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 MRPS9P82933 396 aaKnown RBP12.36□□□□□ -0.43
FXR1-202ENST00000357559 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 AACSQ86V21 672 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms