RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 VCX3BQ9H321 246 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 SMG6Q86US8 1419 aaKnown RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 GOLIM4O00461 696 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 LMNB2Q03252 620 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 THEGQ9P2T0 379 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 HDAC1Q13547 482 aaPredicted RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 VCXQ9H320 206 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 INSRP06213 1382 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 CEP57L1Q8IYX8 460 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 NSRP1Q9H0G5 558 aaKnown RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 TPRNQ4KMQ1 711 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 C6orf163Q5TEZ5 329 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 ERC2O15083 957 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 PDE6BP35913 854 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 STIM1Q13586 685 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 SMC2O95347 1197 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 ZC3H15Q8WU90 426 aaKnown RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 TERF2IPQ9NYB0 399 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 SATB2Q9UPW6 733 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 DESP17661 470 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC150Q8NCX0 1101 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 XBP1P17861 261 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 ITPRIPQ8IWB1 547 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 RASSF8Q8NHQ8 419 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 LARSQ9P2J5 1176 aaKnown RBP5.49□□□□□ -1.53
SYNE2-203ENST00000357395 MAP7Q14244 749 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 PDILTQ8N807 584 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 ARHGAP35Q9NRY4 1499 aa5.49□□□□□ -1.53
SYNE2-203ENST00000357395 CASTP20810 708 aaKnown RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 IFI16Q16666 785 aaKnown RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 GCC1Q96CN9 775 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 TTC31Q49AM3 519 aaPredicted RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 DNAI2Q9GZS0 605 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 TPD52L1Q16890 204 aaPredicted RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 ARFGAP2Q8N6H7 521 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 CEP104O60308 925 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 SH2B1Q9NRF2 756 aaPredicted RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 ELP1O95163 1332 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 IFT74Q96LB3 600 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 ARFGAP3Q9NP61 516 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 SEC63Q9UGP8 760 aaKnown RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 SCAND2PQ9GZW5 306 aaPredicted RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 OPA1O60313 960 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 PRPF38AQ8NAV1 312 aaKnown RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC110Q8TBZ0 833 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 RBM33Q96EV2 1170 aaKnown RBP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 LZICQ8WZA0 190 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 P3H4Q92791 437 aa5.48□□□□□ -1.53
SYNE2-203ENST00000357395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.48□□□□□ -1.53
SYNE2-203ENST00000357395 SAFBQ15424 915 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 JAKMIP2Q96AA8 810 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 STIM2Q9P246 746 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 MPHOSPH6Q99547 160 aaKnown RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ZKSCAN8Q15776 578 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 USO1O60763 962 aaKnown RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ZNF397Q8NF99 534 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 NBPF3Q9H094 633 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 SMTNL1A8MU46 457 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 WDR78Q5VTH9 848 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 GBP6Q6ZN66 633 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 LUC7L2Q9Y383 392 aaKnown RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ATP8B1O43520 1251 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ATP6V1AP38606 617 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 SIN3AQ96ST3 1273 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 KIF5CO60282 957 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 SFPQP23246 707 aaKnown RBP eCLIP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 C16orf45Q96MC5 204 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ZNF396Q96N95 335 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 CWC25Q9NXE8 425 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 TTC12Q9H892 705 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 MACROD2A1Z1Q3 448 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 IQCDQ96DY2 449 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 CCDC175P0C221 793 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 LMNTD2Q8IXW0 634 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 EIF2AQ9BY44 585 aaKnown RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 NMIQ13287 307 aaPredicted RBP5.47□□□□□ -1.53
SYNE2-203ENST00000357395 LRCH2Q5VUJ6 765 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ALS2CR12Q96Q35 445 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ATP5DP30049 168 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
SYNE2-203ENST00000357395 EBAG9O00559 213 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 KRT32Q14532 448 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 TAF7Q15545 349 aaPredicted RBP5.46□□□□□ -1.53
SYNE2-203ENST00000357395 KANK1Q14678 1352 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 KIF5BP33176 963 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 TSC1Q92574 1164 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 RAI14Q9P0K7 980 aa5.46□□□□□ -1.53
SYNE2-203ENST00000357395 KINO60870 393 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 NOL3O60936 208 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 TACC1O75410 805 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 ZNF592Q92610 1267 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 MCM4P33991 863 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 CCDC174Q6PII3 467 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 BACH2Q9BYV9 841 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 SPATS2LQ9NUQ6 558 aaKnown RBP5.46□□□□□ -1.54
SYNE2-203ENST00000357395 WHAMMQ8TF30 809 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 PLVAPQ9BX97 442 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 RASSF2P50749 326 aa5.46□□□□□ -1.54
SYNE2-203ENST00000357395 PRPHP41219 470 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms