RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 EDC4Q6P2E9 1401 aaKnown RBP22.28■■□□□ 1.16
GYPC-202ENST00000356887 CALD1Q05682 793 aaKnown RBP22.28■■□□□ 1.16
GYPC-202ENST00000356887 HMOX1P09601 288 aa22.27■■□□□ 1.16
GYPC-202ENST00000356887 MFAP1P55081 439 aaKnown RBP22.27■■□□□ 1.16
GYPC-202ENST00000356887 MRPL50Q8N5N7 158 aaKnown RBP22.27■■□□□ 1.16
GYPC-202ENST00000356887 WASLO00401 505 aaPredicted RBP22.27■■□□□ 1.16
GYPC-202ENST00000356887 ARHGAP45Q92619 1136 aa22.27■■□□□ 1.16
GYPC-202ENST00000356887 EMILIN1Q9Y6C2 1016 aa22.27■■□□□ 1.16
GYPC-202ENST00000356887 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
GYPC-202ENST00000356887 IFT57Q9NWB7 429 aa22.26■■□□□ 1.15
GYPC-202ENST00000356887 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
GYPC-202ENST00000356887 GNAI1P63096 354 aa22.25■■□□□ 1.15
GYPC-202ENST00000356887 AATKQ6ZMQ8 1374 aa22.25■■□□□ 1.15
GYPC-202ENST00000356887 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
GYPC-202ENST00000356887 THUMPD2Q9BTF0 503 aaKnown RBP22.25■■□□□ 1.15
GYPC-202ENST00000356887 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
GYPC-202ENST00000356887 NME9Q86XW9 330 aa22.24■■□□□ 1.15
GYPC-202ENST00000356887 PTCH1Q13635 1447 aa22.24■■□□□ 1.15
GYPC-202ENST00000356887 CHD1LQ86WJ1 897 aa22.24■■□□□ 1.15
GYPC-202ENST00000356887 RTN4Q9NQC3 1192 aaKnown RBP22.24■■□□□ 1.15
GYPC-202ENST00000356887 NRXN3Q9Y4C0 1643 aa22.24■■□□□ 1.15
GYPC-202ENST00000356887 CHMP4BQ9H444 224 aaKnown RBP22.23■■□□□ 1.15
GYPC-202ENST00000356887 TSPYL6Q8N831 410 aa22.22■■□□□ 1.15
GYPC-202ENST00000356887 ZRANB1Q9UGI0 708 aa22.22■■□□□ 1.15
GYPC-202ENST00000356887 LNPKQ9C0E8 428 aa22.22■■□□□ 1.15
GYPC-202ENST00000356887 PKNOX2Q96KN3 472 aa22.21■■□□□ 1.15
GYPC-202ENST00000356887 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
GYPC-202ENST00000356887 METP08581 1390 aa22.21■■□□□ 1.15
GYPC-202ENST00000356887 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
GYPC-202ENST00000356887 NUDT16Q96DE0 195 aaKnown RBP22.2■■□□□ 1.14
GYPC-202ENST00000356887 SIRT1Q96EB6 747 aa22.19■■□□□ 1.14
GYPC-202ENST00000356887 GCC1Q96CN9 775 aa22.19■■□□□ 1.14
GYPC-202ENST00000356887 ABCC4O15439 1325 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 CPS1P31327 1500 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 RBM25P49756 843 aaKnown RBP22.18■■□□□ 1.14
GYPC-202ENST00000356887 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 TXNDC2Q86VQ3 553 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 SPRYD3Q8NCJ5 442 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 COG3Q96JB2 828 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 CFAP44Q96MT7 982 aa22.18■■□□□ 1.14
GYPC-202ENST00000356887 BMP2KLQ5H9B9 411 aa22.17■■□□□ 1.14
GYPC-202ENST00000356887 CHMP5Q9NZZ3 219 aa22.17■■□□□ 1.14
GYPC-202ENST00000356887 CCDC61Q9Y6R9 512 aa22.17■■□□□ 1.14
GYPC-202ENST00000356887 DLG5Q8TDM6 1919 aa22.16■■□□□ 1.14
GYPC-202ENST00000356887 TMEM2Q9UHN6 1383 aa22.16■■□□□ 1.14
GYPC-202ENST00000356887 TWISTNBQ3B726 338 aaPredicted RBP22.16■■□□□ 1.14
GYPC-202ENST00000356887 KNDC1Q76NI1 1749 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 ELL2O00472 640 aaPredicted RBP22.15■■□□□ 1.14
GYPC-202ENST00000356887 ANKRD45Q5TZF3 282 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 TECPR2O15040 1411 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 MCM4P33991 863 aa22.15■■□□□ 1.14
GYPC-202ENST00000356887 CEP170BQ9Y4F5 1589 aaPredicted RBP22.14■■□□□ 1.13
GYPC-202ENST00000356887 AKAP12Q02952 1782 aa22.14■■□□□ 1.13
GYPC-202ENST00000356887 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
GYPC-202ENST00000356887 HSCBQ8IWL3 235 aa22.14■■□□□ 1.13
GYPC-202ENST00000356887 SIRT2Q8IXJ6 389 aa22.14■■□□□ 1.13
GYPC-202ENST00000356887 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
GYPC-202ENST00000356887 SNX21Q969T3 373 aa22.13■■□□□ 1.13
GYPC-202ENST00000356887 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
GYPC-202ENST00000356887 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
GYPC-202ENST00000356887 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
GYPC-202ENST00000356887 NCOA3Q9Y6Q9 1424 aa22.11■■□□□ 1.13
GYPC-202ENST00000356887 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
GYPC-202ENST00000356887 KIF24Q5T7B8 1368 aa22.1■■□□□ 1.13
GYPC-202ENST00000356887 SLIT1O75093 1534 aa22.1■■□□□ 1.13
GYPC-202ENST00000356887 ZNF142P52746 1687 aaPredicted RBP22.1■■□□□ 1.13
GYPC-202ENST00000356887 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
GYPC-202ENST00000356887 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
GYPC-202ENST00000356887 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
GYPC-202ENST00000356887 DDIT3P35638 169 aa22.09■■□□□ 1.13
GYPC-202ENST00000356887 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
GYPC-202ENST00000356887 L1TD1Q5T7N2 865 aaKnown RBP22.08■■□□□ 1.12
GYPC-202ENST00000356887 NRKQ7Z2Y5 1582 aa22.08■■□□□ 1.12
GYPC-202ENST00000356887 LTKP29376 864 aa22.07■■□□□ 1.12
GYPC-202ENST00000356887 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
GYPC-202ENST00000356887 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
GYPC-202ENST00000356887 KIF2CQ99661 725 aa22.06■■□□□ 1.12
GYPC-202ENST00000356887 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
GYPC-202ENST00000356887 TBC1D9Q6ZT07 1266 aa22.05■■□□□ 1.12
GYPC-202ENST00000356887 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
GYPC-202ENST00000356887 AEBP1Q8IUX7 1158 aa22.03■■□□□ 1.12
GYPC-202ENST00000356887 PLEKHG1Q9ULL1 1385 aa22.03■■□□□ 1.12
GYPC-202ENST00000356887 TTC21BQ7Z4L5 1316 aa22.02■■□□□ 1.12
GYPC-202ENST00000356887 SULT6B1Q6IMI4 303 aa22.02■■□□□ 1.12
GYPC-202ENST00000356887 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
GYPC-202ENST00000356887 ROBO2Q9HCK4 1378 aa22.02■■□□□ 1.12
GYPC-202ENST00000356887 CHL1O00533 1208 aa22.02■■□□□ 1.11
GYPC-202ENST00000356887 DCTPP1Q9H773 170 aa22.02■■□□□ 1.11
GYPC-202ENST00000356887 FSD2A1L4K1 749 aa22.01■■□□□ 1.11
GYPC-202ENST00000356887 TRAK2O60296 914 aa22.01■■□□□ 1.11
GYPC-202ENST00000356887 FAM43AQ8N2R8 423 aa22.01■■□□□ 1.11
GYPC-202ENST00000356887 CIZ1Q9ULV3 898 aaPredicted RBP22■■□□□ 1.11
GYPC-202ENST00000356887 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
GYPC-202ENST00000356887 KDM4FA0A1W2PPD8 638 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 PLEKHG3A1L390 1219 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 CDC45O75419 566 aa21.99■■□□□ 1.11
GYPC-202ENST00000356887 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms