RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 SSH1Q8WYL5 1049 aa12.26□□□□□ -0.45
CCDC25-201ENST00000356537 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
CCDC25-201ENST00000356537 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
CCDC25-201ENST00000356537 CLUAP1Q96AJ1 413 aa12.25□□□□□ -0.45
CCDC25-201ENST00000356537 FAM83GA6ND36 823 aa12.25□□□□□ -0.45
CCDC25-201ENST00000356537 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
CCDC25-201ENST00000356537 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
CCDC25-201ENST00000356537 MS4A1P11836 297 aa12.24□□□□□ -0.45
CCDC25-201ENST00000356537 LTN1O94822 1766 aa12.24□□□□□ -0.45
CCDC25-201ENST00000356537 ZNF853P0CG23 659 aa12.23□□□□□ -0.45
CCDC25-201ENST00000356537 TSPYL6Q8N831 410 aa12.23□□□□□ -0.45
CCDC25-201ENST00000356537 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
CCDC25-201ENST00000356537 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
CCDC25-201ENST00000356537 TRIM27P14373 513 aa12.23□□□□□ -0.45
CCDC25-201ENST00000356537 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
CCDC25-201ENST00000356537 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
CCDC25-201ENST00000356537 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
CCDC25-201ENST00000356537 C8orf34Q49A92 452 aa12.22□□□□□ -0.45
CCDC25-201ENST00000356537 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
CCDC25-201ENST00000356537 ANKARQ7Z5J8 1434 aa12.22□□□□□ -0.45
CCDC25-201ENST00000356537 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.46
CCDC25-201ENST00000356537 SOX12O15370 315 aa12.2□□□□□ -0.46
CCDC25-201ENST00000356537 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
CCDC25-201ENST00000356537 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
CCDC25-201ENST00000356537 NOB1Q9ULX3 412 aaKnown RBP12.2□□□□□ -0.46
CCDC25-201ENST00000356537 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
CCDC25-201ENST00000356537 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
CCDC25-201ENST00000356537 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
CCDC25-201ENST00000356537 STRCP1A6NGW2 1772 aa12.19□□□□□ -0.46
CCDC25-201ENST00000356537 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
CCDC25-201ENST00000356537 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
CCDC25-201ENST00000356537 TTC21AQ8NDW8 1320 aa12.19□□□□□ -0.46
CCDC25-201ENST00000356537 VAMP4O75379 141 aa12.19□□□□□ -0.46
CCDC25-201ENST00000356537 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
CCDC25-201ENST00000356537 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
CCDC25-201ENST00000356537 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
CCDC25-201ENST00000356537 NFAT5O94916 1531 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 NUTM2GQ5VZR2 741 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 DZIP1LQ8IYY4 767 aaKnown RBP12.17□□□□□ -0.46
CCDC25-201ENST00000356537 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 RGS3P49796 1198 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 KDRP35968 1356 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
CCDC25-201ENST00000356537 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
CCDC25-201ENST00000356537 FOXO3O43524 673 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 ANKLE2Q86XL3 938 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 SBNO1A3KN83 1393 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 CRB1P82279 1406 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
CCDC25-201ENST00000356537 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
CCDC25-201ENST00000356537 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
CCDC25-201ENST00000356537 ADGRL3Q9HAR2 1447 aa12.15□□□□□ -0.46
CCDC25-201ENST00000356537 TRPM3Q9HCF6 1732 aaPredicted RBP12.15□□□□□ -0.46
CCDC25-201ENST00000356537 FLT4P35916 1363 aa12.15□□□□□ -0.46
CCDC25-201ENST00000356537 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
CCDC25-201ENST00000356537 MCM10Q7L590 875 aa12.15□□□□□ -0.46
CCDC25-201ENST00000356537 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
CCDC25-201ENST00000356537 ARHGEF10O15013 1369 aa12.15□□□□□ -0.47
CCDC25-201ENST00000356537 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.47
CCDC25-201ENST00000356537 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
CCDC25-201ENST00000356537 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
CCDC25-201ENST00000356537 EYA1Q99502 592 aa12.14□□□□□ -0.47
CCDC25-201ENST00000356537 IGSF1Q8N6C5 1336 aa12.14□□□□□ -0.47
CCDC25-201ENST00000356537 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
CCDC25-201ENST00000356537 ZBTB40Q9NUA8 1239 aa12.13□□□□□ -0.47
CCDC25-201ENST00000356537 RGS12O14924 1447 aa12.13□□□□□ -0.47
CCDC25-201ENST00000356537 NLRP6P59044 892 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
CCDC25-201ENST00000356537 USP19O94966 1318 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 SEC24BO95487 1268 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 HOXC9P31274 260 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 GNAI1P63096 354 aa12.12□□□□□ -0.47
CCDC25-201ENST00000356537 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
CCDC25-201ENST00000356537 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
CCDC25-201ENST00000356537 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 CHL1O00533 1208 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 TWISTNBQ3B726 338 aaPredicted RBP12.11□□□□□ -0.47
CCDC25-201ENST00000356537 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
CCDC25-201ENST00000356537 AAMPQ13685 434 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
CCDC25-201ENST00000356537 ABTB2Q8N961 1025 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 ABCC4O15439 1325 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
CCDC25-201ENST00000356537 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
CCDC25-201ENST00000356537 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
CCDC25-201ENST00000356537 NEFMP07197 916 aa12.09□□□□□ -0.47
CCDC25-201ENST00000356537 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
CCDC25-201ENST00000356537 MSH6P52701 1360 aa12.09□□□□□ -0.47
CCDC25-201ENST00000356537 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
CCDC25-201ENST00000356537 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
CCDC25-201ENST00000356537 SIRT2Q8IXJ6 389 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms