RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 STRCP1A6NGW2 1772 aa33.38■■■□□ 2.93
CLK2-201ENST00000355560 IL16Q14005 1332 aa33.37■■■□□ 2.93
CLK2-201ENST00000355560 RGPD1P0DJD0 1748 aa33.36■■■□□ 2.93
CLK2-201ENST00000355560 PSME1Q06323 249 aa33.35■■■□□ 2.93
CLK2-201ENST00000355560 FANCIQ9NVI1 1328 aa33.35■■■□□ 2.93
CLK2-201ENST00000355560 ORAI2Q96SN7 254 aa33.35■■■□□ 2.93
CLK2-201ENST00000355560 C19orf44Q9H6X5 657 aa33.34■■■□□ 2.93
CLK2-201ENST00000355560 TSR2Q969E8 191 aaKnown RBP33.34■■■□□ 2.93
CLK2-201ENST00000355560 AMPHP49418 695 aa33.33■■■□□ 2.93
CLK2-201ENST00000355560 LMTK3Q96Q04 1460 aa33.33■■■□□ 2.93
CLK2-201ENST00000355560 SULT6B1Q6IMI4 303 aa33.32■■■□□ 2.93
CLK2-201ENST00000355560 AEBP1Q8IUX7 1158 aa33.32■■■□□ 2.93
CLK2-201ENST00000355560 TSHZ2Q9NRE2 1034 aa33.32■■■□□ 2.93
CLK2-201ENST00000355560 TMEM94Q12767 1356 aa33.32■■■□□ 2.92
CLK2-201ENST00000355560 DLG5Q8TDM6 1919 aa33.3■■■□□ 2.92
CLK2-201ENST00000355560 RARSP54136 660 aaKnown RBP33.29■■■□□ 2.92
CLK2-201ENST00000355560 C1orf167Q5SNV9 1468 aa33.29■■■□□ 2.92
CLK2-201ENST00000355560 FOXO3O43524 673 aa33.28■■■□□ 2.92
CLK2-201ENST00000355560 KIF24Q5T7B8 1368 aa33.28■■■□□ 2.92
CLK2-201ENST00000355560 KIF1AQ12756 1690 aa33.27■■■□□ 2.92
CLK2-201ENST00000355560 ARHGEF10O15013 1369 aa33.27■■■□□ 2.92
CLK2-201ENST00000355560 CT47B1P0C2W7 299 aaPredicted RBP33.24■■■□□ 2.91
CLK2-201ENST00000355560 NCOA3Q9Y6Q9 1424 aa33.24■■■□□ 2.91
CLK2-201ENST00000355560 HOXC9P31274 260 aa33.23■■■□□ 2.91
CLK2-201ENST00000355560 XPCQ01831 940 aaPredicted RBP33.23■■■□□ 2.91
CLK2-201ENST00000355560 EXOSC9Q06265 439 aaKnown RBP33.23■■■□□ 2.91
CLK2-201ENST00000355560 LMOD3Q0VAK6 560 aa33.23■■■□□ 2.91
CLK2-201ENST00000355560 LTN1O94822 1766 aa33.23■■■□□ 2.91
CLK2-201ENST00000355560 DCCP43146 1447 aa33.23■■■□□ 2.91
CLK2-201ENST00000355560 STRCQ7RTU9 1775 aa33.22■■■□□ 2.91
CLK2-201ENST00000355560 ATF3P18847 181 aa33.22■■■□□ 2.91
CLK2-201ENST00000355560 CANXP27824 592 aaKnown RBP33.22■■■□□ 2.91
CLK2-201ENST00000355560 THUMPD2Q9BTF0 503 aaKnown RBP33.22■■■□□ 2.91
CLK2-201ENST00000355560 CALD1Q05682 793 aaKnown RBP33.22■■■□□ 2.91
CLK2-201ENST00000355560 NFAT5O94916 1531 aa33.21■■■□□ 2.91
CLK2-201ENST00000355560 BCL2L13Q9BXK5 485 aa33.2■■■□□ 2.91
CLK2-201ENST00000355560 MST1RQ04912 1400 aa33.2■■■□□ 2.91
CLK2-201ENST00000355560 TRPM3Q9HCF6 1732 aaPredicted RBP33.19■■■□□ 2.9
CLK2-201ENST00000355560 RTL1A6NKG5 1358 aa33.19■■■□□ 2.9
CLK2-201ENST00000355560 IGSF1Q8N6C5 1336 aa33.19■■■□□ 2.9
CLK2-201ENST00000355560 FRAT1Q92837 279 aaPredicted RBP33.19■■■□□ 2.9
CLK2-201ENST00000355560 KDRP35968 1356 aa33.18■■■□□ 2.9
CLK2-201ENST00000355560 PDE3AQ14432 1141 aa33.17■■■□□ 2.9
CLK2-201ENST00000355560 EYA1Q99502 592 aa33.17■■■□□ 2.9
CLK2-201ENST00000355560 LAS1LQ9Y4W2 734 aaKnown RBP33.17■■■□□ 2.9
CLK2-201ENST00000355560 KCNH5Q8NCM2 988 aa33.16■■■□□ 2.9
CLK2-201ENST00000355560 FAM83GA6ND36 823 aa33.14■■■□□ 2.9
CLK2-201ENST00000355560 KRT28Q7Z3Y7 464 aa33.14■■■□□ 2.9
CLK2-201ENST00000355560 IFT57Q9NWB7 429 aa33.14■■■□□ 2.9
CLK2-201ENST00000355560 GNAI1P63096 354 aa33.13■■■□□ 2.89
CLK2-201ENST00000355560 LMOD2Q6P5Q4 547 aa33.11■■■□□ 2.89
CLK2-201ENST00000355560 CADPS2Q86UW7 1296 aa33.11■■■□□ 2.89
CLK2-201ENST00000355560 MSH6P52701 1360 aa33.11■■■□□ 2.89
CLK2-201ENST00000355560 SLIT3O75094 1523 aa33.11■■■□□ 2.89
CLK2-201ENST00000355560 XIRP1Q702N8 1843 aaKnown RBP33.1■■■□□ 2.89
CLK2-201ENST00000355560 DCTN1Q14203 1278 aa33.1■■■□□ 2.89
CLK2-201ENST00000355560 ZNF853P0CG23 659 aa33.1■■■□□ 2.89
CLK2-201ENST00000355560 PANK1Q8TE04 598 aa33.1■■■□□ 2.89
CLK2-201ENST00000355560 PHRF1Q9P1Y6 1649 aaKnown RBP33.09■■■□□ 2.89
CLK2-201ENST00000355560 LTV1Q96GA3 475 aaPredicted RBP33.09■■■□□ 2.89
CLK2-201ENST00000355560 SMC4Q9NTJ3 1288 aa33.09■■■□□ 2.89
CLK2-201ENST00000355560 IP6K1Q92551 441 aa33.08■■■□□ 2.89
CLK2-201ENST00000355560 CFAP44Q96MT7 982 aa33.08■■■□□ 2.89
CLK2-201ENST00000355560 MBIPQ9NS73 344 aa33.07■■■□□ 2.88
CLK2-201ENST00000355560 GCP02774 474 aa33.06■■■□□ 2.88
CLK2-201ENST00000355560 SSH1Q8WYL5 1049 aa33.06■■■□□ 2.88
CLK2-201ENST00000355560 ALS2Q96Q42 1657 aa33.05■■■□□ 2.88
CLK2-201ENST00000355560 USP19O94966 1318 aa33.05■■■□□ 2.88
CLK2-201ENST00000355560 COG6Q9Y2V7 657 aa33.05■■■□□ 2.88
CLK2-201ENST00000355560 ZBTB7CA1YPR0 619 aa33.04■■■□□ 2.88
CLK2-201ENST00000355560 PLEKHG5O94827 1062 aa33.04■■■□□ 2.88
CLK2-201ENST00000355560 MTHFSDQ2M296 383 aaKnown RBP33.04■■■□□ 2.88
CLK2-201ENST00000355560 TNNQ9UQP3 1299 aa33.03■■■□□ 2.88
CLK2-201ENST00000355560 ZKSCAN2Q63HK3 967 aa33.02■■■□□ 2.88
CLK2-201ENST00000355560 MCM10Q7L590 875 aa33.02■■■□□ 2.88
CLK2-201ENST00000355560 RLBP1P12271 317 aa33.01■■■□□ 2.88
CLK2-201ENST00000355560 DDX17Q92841 729 aaKnown RBP33.01■■■□□ 2.87
CLK2-201ENST00000355560 ZNF335Q9H4Z2 1342 aaPredicted RBP33■■■□□ 2.87
CLK2-201ENST00000355560 GAS2L2Q8NHY3 880 aa32.99■■■□□ 2.87
CLK2-201ENST00000355560 CLUAP1Q96AJ1 413 aa32.99■■■□□ 2.87
CLK2-201ENST00000355560 ZNF428Q96B54 188 aa32.99■■■□□ 2.87
CLK2-201ENST00000355560 ALDH1L2Q3SY69 923 aa32.99■■■□□ 2.87
CLK2-201ENST00000355560 ARHGEF25Q86VW2 580 aa32.99■■■□□ 2.87
CLK2-201ENST00000355560 NPHP3Q7Z494 1330 aa32.98■■■□□ 2.87
CLK2-201ENST00000355560 KDM2BQ8NHM5 1336 aa32.97■■■□□ 2.87
CLK2-201ENST00000355560 USHBP1Q8N6Y0 703 aa32.96■■■□□ 2.87
CLK2-201ENST00000355560 TSPYL6Q8N831 410 aa32.96■■■□□ 2.87
CLK2-201ENST00000355560 KIF16BQ96L93 1317 aa32.96■■■□□ 2.87
CLK2-201ENST00000355560 VAMP4O75379 141 aa32.95■■■□□ 2.87
CLK2-201ENST00000355560 RTF1Q92541 710 aaKnown RBP32.95■■■□□ 2.87
CLK2-201ENST00000355560 FTSJ3Q8IY81 847 aaKnown RBP32.95■■■□□ 2.86
CLK2-201ENST00000355560 MED1Q15648 1581 aaPredicted RBP32.94■■■□□ 2.86
CLK2-201ENST00000355560 TRIM27P14373 513 aa32.93■■■□□ 2.86
CLK2-201ENST00000355560 DZIP1LQ8IYY4 767 aaKnown RBP32.93■■■□□ 2.86
CLK2-201ENST00000355560 CRB1P82279 1406 aa32.93■■■□□ 2.86
CLK2-201ENST00000355560 MS4A1P11836 297 aa32.93■■■□□ 2.86
CLK2-201ENST00000355560 CENPQQ7L2Z9 268 aaPredicted RBP32.93■■■□□ 2.86
CLK2-201ENST00000355560 NOB1Q9ULX3 412 aaKnown RBP32.93■■■□□ 2.86
CLK2-201ENST00000355560 RGPD2P0DJD1 1756 aa32.93■■■□□ 2.86
CLK2-201ENST00000355560 ELL2O00472 640 aaPredicted RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms