RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PDZRN3Q9UPQ7 1066 aa28.34■■■□□ 2.13
NKX2-1-201ENST00000354822 TBX22Q9Y458 520 aa28.34■■■□□ 2.13
NKX2-1-201ENST00000354822 SLC26A8Q96RN1 970 aa28.33■■■□□ 2.13
NKX2-1-201ENST00000354822 PRR36Q9H6K5 1346 aa28.33■■■□□ 2.13
NKX2-1-201ENST00000354822 DIP2AQ14689 1571 aa28.33■■■□□ 2.13
NKX2-1-201ENST00000354822 HMOX1P09601 288 aa28.33■■■□□ 2.12
NKX2-1-201ENST00000354822 LMOD3Q0VAK6 560 aa28.33■■■□□ 2.12
NKX2-1-201ENST00000354822 HDAC1Q13547 482 aaPredicted RBP28.33■■■□□ 2.12
NKX2-1-201ENST00000354822 PHACTR3Q96KR7 559 aa28.33■■■□□ 2.12
NKX2-1-201ENST00000354822 GNAI1P63096 354 aa28.32■■■□□ 2.12
NKX2-1-201ENST00000354822 ITPRIPQ8IWB1 547 aa28.31■■■□□ 2.12
NKX2-1-201ENST00000354822 IFT57Q9NWB7 429 aa28.31■■■□□ 2.12
NKX2-1-201ENST00000354822 ZRANB1Q9UGI0 708 aa28.31■■■□□ 2.12
NKX2-1-201ENST00000354822 NCKAP5LQ9HCH0 1330 aa28.3■■■□□ 2.12
NKX2-1-201ENST00000354822 DEKP35659 375 aaKnown RBP28.3■■■□□ 2.12
NKX2-1-201ENST00000354822 TOPAZ1Q8N9V7 1692 aa28.29■■■□□ 2.12
NKX2-1-201ENST00000354822 LAS1LQ9Y4W2 734 aaKnown RBP28.28■■■□□ 2.12
NKX2-1-201ENST00000354822 PLEKHG3A1L390 1219 aa28.28■■■□□ 2.12
NKX2-1-201ENST00000354822 AMOTL2Q9Y2J4 779 aa28.27■■■□□ 2.12
NKX2-1-201ENST00000354822 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
NKX2-1-201ENST00000354822 TMEM57Q8N5G2 664 aa28.26■■■□□ 2.11
NKX2-1-201ENST00000354822 CHMP4BQ9H444 224 aaKnown RBP28.26■■■□□ 2.11
NKX2-1-201ENST00000354822 RRS1Q15050 365 aaKnown RBP28.26■■■□□ 2.11
NKX2-1-201ENST00000354822 ARHGAP45Q92619 1136 aa28.26■■■□□ 2.11
NKX2-1-201ENST00000354822 ZNF853P0CG23 659 aa28.25■■■□□ 2.11
NKX2-1-201ENST00000354822 ZBTB40Q9NUA8 1239 aa28.25■■■□□ 2.11
NKX2-1-201ENST00000354822 RIMS1Q86UR5 1692 aaKnown RBP28.25■■■□□ 2.11
NKX2-1-201ENST00000354822 CEP170BQ9Y4F5 1589 aaPredicted RBP28.25■■■□□ 2.11
NKX2-1-201ENST00000354822 TTC21BQ7Z4L5 1316 aa28.24■■■□□ 2.11
NKX2-1-201ENST00000354822 USP19O94966 1318 aa28.23■■■□□ 2.11
NKX2-1-201ENST00000354822 VAMP4O75379 141 aa28.23■■■□□ 2.11
NKX2-1-201ENST00000354822 UPF2Q9HAU5 1272 aaKnown RBP28.23■■■□□ 2.11
NKX2-1-201ENST00000354822 ACEP12821 1306 aa28.22■■■□□ 2.11
NKX2-1-201ENST00000354822 CFAP44Q96MT7 982 aa28.22■■■□□ 2.11
NKX2-1-201ENST00000354822 NRKQ7Z2Y5 1582 aa28.21■■■□□ 2.11
NKX2-1-201ENST00000354822 SMC5Q8IY18 1101 aa28.2■■■□□ 2.11
NKX2-1-201ENST00000354822 XRN1Q8IZH2 1706 aaKnown RBP28.2■■■□□ 2.1
NKX2-1-201ENST00000354822 SLC4A3P48751 1232 aa28.18■■■□□ 2.1
NKX2-1-201ENST00000354822 MRPL50Q8N5N7 158 aaKnown RBP28.18■■■□□ 2.1
NKX2-1-201ENST00000354822 SEC24BO95487 1268 aa28.18■■■□□ 2.1
NKX2-1-201ENST00000354822 MBIPQ9NS73 344 aa28.18■■■□□ 2.1
NKX2-1-201ENST00000354822 THUMPD2Q9BTF0 503 aaKnown RBP28.17■■■□□ 2.1
NKX2-1-201ENST00000354822 USP6P35125 1406 aa28.17■■■□□ 2.1
NKX2-1-201ENST00000354822 OVOS2A0A0J9YW53 1432 aa28.17■■■□□ 2.1
NKX2-1-201ENST00000354822 OVOS2Q6IE36 1432 aa28.17■■■□□ 2.1
NKX2-1-201ENST00000354822 PIK3R4Q99570 1358 aa28.15■■■□□ 2.1
NKX2-1-201ENST00000354822 EIF4A2Q14240 407 aaKnown RBP28.14■■■□□ 2.1
NKX2-1-201ENST00000354822 BECN1Q14457 450 aa28.14■■■□□ 2.1
NKX2-1-201ENST00000354822 USP31Q70CQ4 1352 aa28.14■■■□□ 2.09
NKX2-1-201ENST00000354822 TWISTNBQ3B726 338 aaPredicted RBP28.13■■■□□ 2.09
NKX2-1-201ENST00000354822 DLG5Q8TDM6 1919 aa28.13■■■□□ 2.09
NKX2-1-201ENST00000354822 ADAMTSL3P82987 1691 aa28.13■■■□□ 2.09
NKX2-1-201ENST00000354822 NUTM2FA1L443 756 aa28.13■■■□□ 2.09
NKX2-1-201ENST00000354822 TTC21AQ8NDW8 1320 aa28.13■■■□□ 2.09
NKX2-1-201ENST00000354822 ZNF142P52746 1687 aaPredicted RBP28.12■■■□□ 2.09
NKX2-1-201ENST00000354822 HAP1P54257 671 aaPredicted RBP28.12■■■□□ 2.09
NKX2-1-201ENST00000354822 TSPYL6Q8N831 410 aa28.12■■■□□ 2.09
NKX2-1-201ENST00000354822 ZBTB7BO15156 539 aaPredicted RBP28.1■■■□□ 2.09
NKX2-1-201ENST00000354822 SSH2Q76I76 1423 aa28.1■■■□□ 2.09
NKX2-1-201ENST00000354822 SULT6B1Q6IMI4 303 aa28.1■■■□□ 2.09
NKX2-1-201ENST00000354822 TBC1D32Q96NH3 1257 aa28.1■■■□□ 2.09
NKX2-1-201ENST00000354822 API5Q9BZZ5 524 aaKnown RBP28.09■■■□□ 2.09
NKX2-1-201ENST00000354822 NALCNQ8IZF0 1738 aa28.08■■■□□ 2.09
NKX2-1-201ENST00000354822 NUCB1Q02818 461 aa28.07■■■□□ 2.08
NKX2-1-201ENST00000354822 NFKBIBQ15653 356 aa28.07■■■□□ 2.08
NKX2-1-201ENST00000354822 C8orf58Q8NAV2 365 aa28.07■■■□□ 2.08
NKX2-1-201ENST00000354822 ABCC4O15439 1325 aa28.06■■■□□ 2.08
NKX2-1-201ENST00000354822 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
NKX2-1-201ENST00000354822 FAM83GA6ND36 823 aa28.06■■■□□ 2.08
NKX2-1-201ENST00000354822 ELL2O00472 640 aaPredicted RBP28.05■■■□□ 2.08
NKX2-1-201ENST00000354822 ANKLE2Q86XL3 938 aa28.05■■■□□ 2.08
NKX2-1-201ENST00000354822 GCC1Q96CN9 775 aa28.05■■■□□ 2.08
NKX2-1-201ENST00000354822 KCNA6P17658 529 aa28.04■■■□□ 2.08
NKX2-1-201ENST00000354822 ANKARQ7Z5J8 1434 aa28.04■■■□□ 2.08
NKX2-1-201ENST00000354822 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
NKX2-1-201ENST00000354822 KIF24Q5T7B8 1368 aa28.04■■■□□ 2.08
NKX2-1-201ENST00000354822 HSP90AB2PQ58FF8 381 aa28.03■■■□□ 2.08
NKX2-1-201ENST00000354822 SETD1BQ9UPS6 1966 aaKnown RBP28.02■■■□□ 2.08
NKX2-1-201ENST00000354822 DCTN1Q14203 1278 aa28.01■■■□□ 2.08
NKX2-1-201ENST00000354822 CHD2O14647 1828 aaKnown RBP28.01■■■□□ 2.07
NKX2-1-201ENST00000354822 CHL1O00533 1208 aa28.01■■■□□ 2.07
NKX2-1-201ENST00000354822 CHD1LQ86WJ1 897 aa28.01■■■□□ 2.07
NKX2-1-201ENST00000354822 FMN2Q9NZ56 1722 aa28.01■■■□□ 2.07
NKX2-1-201ENST00000354822 NGDNQ8NEJ9 315 aaKnown RBP28■■■□□ 2.07
NKX2-1-201ENST00000354822 ARHGEF10O15013 1369 aa28■■■□□ 2.07
NKX2-1-201ENST00000354822 RGPD1P0DJD0 1748 aa27.99■■■□□ 2.07
NKX2-1-201ENST00000354822 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
NKX2-1-201ENST00000354822 PEAK1Q9H792 1746 aa27.99■■■□□ 2.07
NKX2-1-201ENST00000354822 SBNO1A3KN83 1393 aa27.98■■■□□ 2.07
NKX2-1-201ENST00000354822 FLT4P35916 1363 aa27.97■■■□□ 2.07
NKX2-1-201ENST00000354822 MAP3K19Q56UN5 1328 aa27.96■■■□□ 2.07
NKX2-1-201ENST00000354822 C22orf23Q9BZE7 217 aa27.94■■■□□ 2.06
NKX2-1-201ENST00000354822 LNPKQ9C0E8 428 aa27.94■■■□□ 2.06
NKX2-1-201ENST00000354822 ANKRD45Q5TZF3 282 aa27.92■■■□□ 2.06
NKX2-1-201ENST00000354822 INTS3Q68E01 1043 aaKnown RBP27.92■■■□□ 2.06
NKX2-1-201ENST00000354822 MCM10Q7L590 875 aa27.92■■■□□ 2.06
NKX2-1-201ENST00000354822 BMP2KLQ5H9B9 411 aa27.91■■■□□ 2.06
NKX2-1-201ENST00000354822 BCL11AQ9H165 835 aa27.91■■■□□ 2.06
NKX2-1-201ENST00000354822 KDRP35968 1356 aa27.91■■■□□ 2.06
NKX2-1-201ENST00000354822 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms