RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
PCDHB11-201ENST00000354757 ANO2Q9NQ90 1003 aa15.23■□□□□ 0.03
PCDHB11-201ENST00000354757 ABCC1P33527 1531 aa15.22■□□□□ 0.03
PCDHB11-201ENST00000354757 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
PCDHB11-201ENST00000354757 EIF4A2Q14240 407 aaKnown RBP15.22■□□□□ 0.03
PCDHB11-201ENST00000354757 TBX22Q9Y458 520 aa15.22■□□□□ 0.03
PCDHB11-201ENST00000354757 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
PCDHB11-201ENST00000354757 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
PCDHB11-201ENST00000354757 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
PCDHB11-201ENST00000354757 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.02
PCDHB11-201ENST00000354757 GCC2Q8IWJ2 1684 aa15.2■□□□□ 0.02
PCDHB11-201ENST00000354757 DIAPH3Q9NSV4 1193 aa15.2■□□□□ 0.02
PCDHB11-201ENST00000354757 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
PCDHB11-201ENST00000354757 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
PCDHB11-201ENST00000354757 IL1RAPL2Q9NP60 686 aa15.2■□□□□ 0.02
PCDHB11-201ENST00000354757 GNAI3P08754 354 aa15.19■□□□□ 0.02
PCDHB11-201ENST00000354757 TRIM27P14373 513 aa15.19■□□□□ 0.02
PCDHB11-201ENST00000354757 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
PCDHB11-201ENST00000354757 EXOC6BQ9Y2D4 811 aa15.19■□□□□ 0.02
PCDHB11-201ENST00000354757 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
PCDHB11-201ENST00000354757 ZFYVE16Q7Z3T8 1539 aa15.18■□□□□ 0.02
PCDHB11-201ENST00000354757 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
PCDHB11-201ENST00000354757 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
PCDHB11-201ENST00000354757 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
PCDHB11-201ENST00000354757 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 C19orf44Q9H6X5 657 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 GNAI2P04899 355 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
PCDHB11-201ENST00000354757 MAP4K4O95819 1239 aaPredicted RBP15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 SLC39A6Q13433 755 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 NSD2O96028 1365 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 LRPPRCP42704 1394 aaKnown RBP15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 METP08581 1390 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 GCP02774 474 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
PCDHB11-201ENST00000354757 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 G3V3G9 751 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 EYA1Q99502 592 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
PCDHB11-201ENST00000354757 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 MSH6P52701 1360 aa15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 C8orf58Q8NAV2 365 aa15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
PCDHB11-201ENST00000354757 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 TRIM44Q96DX7 344 aaPredicted RBP15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 C22orf23Q9BZE7 217 aa15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 APPP05067 770 aa15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
PCDHB11-201ENST00000354757 EIF2AK4Q9P2K8 1649 aaKnown RBP15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 ST18O60284 1047 aa15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 TMX4Q9H1E5 349 aaPredicted RBP15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 BICDL1Q6ZP65 573 aa15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
PCDHB11-201ENST00000354757 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
PCDHB11-201ENST00000354757 PTPRTO14522 1441 aa15.11■□□□□ 0.01
PCDHB11-201ENST00000354757 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
PCDHB11-201ENST00000354757 TTC21AQ8NDW8 1320 aa15.11■□□□□ 0.01
PCDHB11-201ENST00000354757 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 VPS37DQ86XT2 251 aa15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 REC8O95072 547 aa15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 PTMAP06454 111 aaKnown RBP15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
PCDHB11-201ENST00000354757 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 FLIIQ13045 1269 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 ZBTB3Q9H5J0 574 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 RLBP1P12271 317 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 IGHDP01880 384 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 CHD1LQ86WJ1 897 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
PCDHB11-201ENST00000354757 HSP90AB4PQ58FF6 505 aa15.08■□□□□ 0.01
PCDHB11-201ENST00000354757 ATP5J2-PTCD1G3V325 749 aa15.08■□□□□ 0
PCDHB11-201ENST00000354757 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
PCDHB11-201ENST00000354757 WASHC4Q2M389 1173 aa15.08■□□□□ 0
PCDHB11-201ENST00000354757 INTS3Q68E01 1043 aaKnown RBP15.08■□□□□ 0
PCDHB11-201ENST00000354757 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
PCDHB11-201ENST00000354757 FBXW7Q969H0 707 aa15.08■□□□□ 0
PCDHB11-201ENST00000354757 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
PCDHB11-201ENST00000354757 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms