RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 CPSF1Q10570 1443 aaKnown RBP22.34■■□□□ 1.17
XRCC3-201ENST00000352127 NUCB1Q02818 461 aa22.34■■□□□ 1.17
XRCC3-201ENST00000352127 ZBTB7BO15156 539 aaPredicted RBP22.34■■□□□ 1.17
XRCC3-201ENST00000352127 AEBP1Q8IUX7 1158 aa22.34■■□□□ 1.17
XRCC3-201ENST00000352127 ANKRD45Q5TZF3 282 aa22.33■■□□□ 1.17
XRCC3-201ENST00000352127 COG3Q96JB2 828 aa22.33■■□□□ 1.17
XRCC3-201ENST00000352127 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.16
XRCC3-201ENST00000352127 SOX12O15370 315 aa22.33■■□□□ 1.16
XRCC3-201ENST00000352127 DLC1Q96QB1 1528 aa22.33■■□□□ 1.16
XRCC3-201ENST00000352127 KRT24Q2M2I5 525 aa22.32■■□□□ 1.16
XRCC3-201ENST00000352127 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
XRCC3-201ENST00000352127 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
XRCC3-201ENST00000352127 SPATA31D1Q6ZQQ2 1576 aa22.32■■□□□ 1.16
XRCC3-201ENST00000352127 PRR36Q9H6K5 1346 aa22.32■■□□□ 1.16
XRCC3-201ENST00000352127 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
XRCC3-201ENST00000352127 ARXQ96QS3 562 aa22.32■■□□□ 1.16
XRCC3-201ENST00000352127 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
XRCC3-201ENST00000352127 GNAI1P63096 354 aa22.3■■□□□ 1.16
XRCC3-201ENST00000352127 CCDC61Q9Y6R9 512 aa22.3■■□□□ 1.16
XRCC3-201ENST00000352127 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
XRCC3-201ENST00000352127 IFT57Q9NWB7 429 aa22.29■■□□□ 1.16
XRCC3-201ENST00000352127 ZNF853P0CG23 659 aa22.29■■□□□ 1.16
XRCC3-201ENST00000352127 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
XRCC3-201ENST00000352127 CDK12Q9NYV4 1490 aaPredicted RBP22.26■■□□□ 1.15
XRCC3-201ENST00000352127 AGLP35573 1532 aa22.26■■□□□ 1.15
XRCC3-201ENST00000352127 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
XRCC3-201ENST00000352127 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
XRCC3-201ENST00000352127 MCM10Q7L590 875 aa22.24■■□□□ 1.15
XRCC3-201ENST00000352127 PRKCSHP14314 528 aaPredicted RBP22.24■■□□□ 1.15
XRCC3-201ENST00000352127 BRPF1P55201 1214 aaPredicted RBP22.24■■□□□ 1.15
XRCC3-201ENST00000352127 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
XRCC3-201ENST00000352127 PTCH1Q13635 1447 aa22.24■■□□□ 1.15
XRCC3-201ENST00000352127 GZF1Q9H116 711 aaPredicted RBP22.23■■□□□ 1.15
XRCC3-201ENST00000352127 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
XRCC3-201ENST00000352127 ROBO2Q9HCK4 1378 aa22.23■■□□□ 1.15
XRCC3-201ENST00000352127 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
XRCC3-201ENST00000352127 EIF4A2Q14240 407 aaKnown RBP22.23■■□□□ 1.15
XRCC3-201ENST00000352127 ABCC4O15439 1325 aa22.23■■□□□ 1.15
XRCC3-201ENST00000352127 AATKQ6ZMQ8 1374 aa22.21■■□□□ 1.15
XRCC3-201ENST00000352127 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
XRCC3-201ENST00000352127 ZNF428Q96B54 188 aa22.21■■□□□ 1.15
XRCC3-201ENST00000352127 HSP90AB2PQ58FF8 381 aa22.21■■□□□ 1.15
XRCC3-201ENST00000352127 ARHGAP45Q92619 1136 aa22.2■■□□□ 1.14
XRCC3-201ENST00000352127 REREQ9P2R6 1566 aa22.2■■□□□ 1.14
XRCC3-201ENST00000352127 HSCBQ8IWL3 235 aa22.2■■□□□ 1.14
XRCC3-201ENST00000352127 FOXD4L1Q9NU39 408 aa22.2■■□□□ 1.14
XRCC3-201ENST00000352127 MIS18AQ9NYP9 233 aa22.2■■□□□ 1.14
XRCC3-201ENST00000352127 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
XRCC3-201ENST00000352127 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
XRCC3-201ENST00000352127 CD2BP2O95400 341 aaKnown RBP22.19■■□□□ 1.14
XRCC3-201ENST00000352127 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
XRCC3-201ENST00000352127 ACEP12821 1306 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 SLC26A8Q96RN1 970 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 MCM4P33991 863 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 TBC1D9Q6ZT07 1266 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
XRCC3-201ENST00000352127 APBB1O00213 710 aa22.17■■□□□ 1.14
XRCC3-201ENST00000352127 C16orf71Q8IYS4 520 aaPredicted RBP22.17■■□□□ 1.14
XRCC3-201ENST00000352127 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
XRCC3-201ENST00000352127 LMOD3Q0VAK6 560 aa22.17■■□□□ 1.14
XRCC3-201ENST00000352127 C3P01024 1663 aa22.17■■□□□ 1.14
XRCC3-201ENST00000352127 CHMP5Q9NZZ3 219 aa22.16■■□□□ 1.14
XRCC3-201ENST00000352127 LTKP29376 864 aa22.16■■□□□ 1.14
XRCC3-201ENST00000352127 RBM25P49756 843 aaKnown RBP22.16■■□□□ 1.14
XRCC3-201ENST00000352127 KIF2CQ99661 725 aa22.16■■□□□ 1.14
XRCC3-201ENST00000352127 KNDC1Q76NI1 1749 aa22.16■■□□□ 1.14
XRCC3-201ENST00000352127 FOXO3O43524 673 aa22.15■■□□□ 1.14
XRCC3-201ENST00000352127 CEBPAP49715 358 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-201ENST00000352127 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-201ENST00000352127 ITSN1Q15811 1721 aa22.15■■□□□ 1.14
XRCC3-201ENST00000352127 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-201ENST00000352127 API5Q9BZZ5 524 aaKnown RBP22.14■■□□□ 1.14
XRCC3-201ENST00000352127 AKAP12Q02952 1782 aa22.14■■□□□ 1.13
XRCC3-201ENST00000352127 TNRQ92752 1358 aa22.14■■□□□ 1.13
XRCC3-201ENST00000352127 OTUD7AQ8TE49 926 aaPredicted RBP22.14■■□□□ 1.13
XRCC3-201ENST00000352127 GSPT1P15170 499 aaKnown RBP22.13■■□□□ 1.13
XRCC3-201ENST00000352127 TMEM2Q9UHN6 1383 aa22.12■■□□□ 1.13
XRCC3-201ENST00000352127 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.12■■□□□ 1.13
XRCC3-201ENST00000352127 TECPR2O15040 1411 aa22.12■■□□□ 1.13
XRCC3-201ENST00000352127 SMARCA5O60264 1052 aaPredicted RBP22.11■■□□□ 1.13
XRCC3-201ENST00000352127 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.1■■□□□ 1.13
XRCC3-201ENST00000352127 ADAMTS13Q76LX8 1427 aa22.1■■□□□ 1.13
XRCC3-201ENST00000352127 HSP90AB1P08238 724 aaKnown RBP22.1■■□□□ 1.13
XRCC3-201ENST00000352127 PLEKHM2Q8IWE5 1019 aa22.09■■□□□ 1.13
XRCC3-201ENST00000352127 CHMP4BQ9H444 224 aaKnown RBP22.09■■□□□ 1.13
XRCC3-201ENST00000352127 PEAK1Q9H792 1746 aa22.09■■□□□ 1.13
XRCC3-201ENST00000352127 HDGFP51858 240 aaKnown RBP22.08■■□□□ 1.13
XRCC3-201ENST00000352127 MEIS3Q99687 375 aa22.08■■□□□ 1.13
XRCC3-201ENST00000352127 RGS12O14924 1447 aa22.08■■□□□ 1.13
XRCC3-201ENST00000352127 CHL1O00533 1208 aa22.08■■□□□ 1.12
XRCC3-201ENST00000352127 TRAK2O60296 914 aa22.08■■□□□ 1.12
XRCC3-201ENST00000352127 MSH6P52701 1360 aa22.08■■□□□ 1.12
XRCC3-201ENST00000352127 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
XRCC3-201ENST00000352127 SIRT1Q96EB6 747 aa22.07■■□□□ 1.12
XRCC3-201ENST00000352127 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
XRCC3-201ENST00000352127 F6X3S4 739 aa22.06■■□□□ 1.12
XRCC3-201ENST00000352127 G2E3Q7L622 706 aa22.06■■□□□ 1.12
XRCC3-201ENST00000352127 OVOS2A0A0J9YW53 1432 aa22.06■■□□□ 1.12
XRCC3-201ENST00000352127 OVOS2Q6IE36 1432 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms