RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
SCARF1-202ENST00000348987 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
SCARF1-202ENST00000348987 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
SCARF1-202ENST00000348987 ATAD2Q6PL18 1390 aa23.2■■□□□ 1.3
SCARF1-202ENST00000348987 PTMSP20962 102 aa23.19■■□□□ 1.3
SCARF1-202ENST00000348987 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
SCARF1-202ENST00000348987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.19■■□□□ 1.3
SCARF1-202ENST00000348987 TMEM131LA2VDJ0 1609 aa23.19■■□□□ 1.3
SCARF1-202ENST00000348987 SSFA2P28290 1259 aa23.18■■□□□ 1.3
SCARF1-202ENST00000348987 NOB1Q9ULX3 412 aaKnown RBP23.18■■□□□ 1.3
SCARF1-202ENST00000348987 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
SCARF1-202ENST00000348987 ITPRIPQ8IWB1 547 aa23.18■■□□□ 1.3
SCARF1-202ENST00000348987 DDX49Q9Y6V7 483 aaKnown RBP23.17■■□□□ 1.3
SCARF1-202ENST00000348987 KIF2CQ99661 725 aa23.16■■□□□ 1.3
SCARF1-202ENST00000348987 TERF1P54274 439 aa23.16■■□□□ 1.3
SCARF1-202ENST00000348987 ATF7IPQ6VMQ6 1270 aa23.16■■□□□ 1.3
SCARF1-202ENST00000348987 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.3
SCARF1-202ENST00000348987 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.3
SCARF1-202ENST00000348987 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.29
SCARF1-202ENST00000348987 CT47B1P0C2W7 299 aaPredicted RBP23.14■■□□□ 1.29
SCARF1-202ENST00000348987 KLHL40Q2TBA0 621 aa23.13■■□□□ 1.29
SCARF1-202ENST00000348987 ARID3AQ99856 593 aa23.13■■□□□ 1.29
SCARF1-202ENST00000348987 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
SCARF1-202ENST00000348987 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
SCARF1-202ENST00000348987 PNPLA6Q8IY17 1366 aa23.12■■□□□ 1.29
SCARF1-202ENST00000348987 ARHGEF40Q8TER5 1519 aa23.12■■□□□ 1.29
SCARF1-202ENST00000348987 CLTCQ00610 1675 aaKnown RBP23.12■■□□□ 1.29
SCARF1-202ENST00000348987 K7ELQ4 463 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-202ENST00000348987 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-202ENST00000348987 THUMPD2Q9BTF0 503 aaKnown RBP23.12■■□□□ 1.29
SCARF1-202ENST00000348987 DDX19BQ9UMR2 479 aa23.12■■□□□ 1.29
SCARF1-202ENST00000348987 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
SCARF1-202ENST00000348987 MAP7D2Q96T17 732 aa23.11■■□□□ 1.29
SCARF1-202ENST00000348987 POLKQ9UBT6 870 aa23.11■■□□□ 1.29
SCARF1-202ENST00000348987 ALKQ9UM73 1620 aa23.11■■□□□ 1.29
SCARF1-202ENST00000348987 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
SCARF1-202ENST00000348987 UQCRHLA0A096LP55 91 aa23.1■■□□□ 1.29
SCARF1-202ENST00000348987 BAG4O95429 457 aaKnown RBP23.1■■□□□ 1.29
SCARF1-202ENST00000348987 UQCRHP07919 91 aa23.1■■□□□ 1.29
SCARF1-202ENST00000348987 HMOX1P09601 288 aa23.1■■□□□ 1.29
SCARF1-202ENST00000348987 PLPPR3Q6T4P5 718 aa23.1■■□□□ 1.29
SCARF1-202ENST00000348987 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
SCARF1-202ENST00000348987 IBTKQ9P2D0 1353 aaPredicted RBP23.09■■□□□ 1.29
SCARF1-202ENST00000348987 NCKAP5LQ9HCH0 1330 aa23.09■■□□□ 1.29
SCARF1-202ENST00000348987 MED14O60244 1454 aa23.09■■□□□ 1.29
SCARF1-202ENST00000348987 NCLP19338 710 aaKnown RBP23.09■■□□□ 1.29
SCARF1-202ENST00000348987 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.09■■□□□ 1.29
SCARF1-202ENST00000348987 NOL7Q9UMY1 257 aaKnown RBP23.09■■□□□ 1.29
SCARF1-202ENST00000348987 IL16Q14005 1332 aa23.08■■□□□ 1.29
SCARF1-202ENST00000348987 NUCB1Q02818 461 aa23.08■■□□□ 1.29
SCARF1-202ENST00000348987 ZBTB40Q9NUA8 1239 aa23.08■■□□□ 1.28
SCARF1-202ENST00000348987 ZRANB1Q9UGI0 708 aa23.07■■□□□ 1.28
SCARF1-202ENST00000348987 PLEKHG5O94827 1062 aa23.07■■□□□ 1.28
SCARF1-202ENST00000348987 CAVIN1Q6NZI2 390 aaKnown RBP23.07■■□□□ 1.28
SCARF1-202ENST00000348987 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
SCARF1-202ENST00000348987 ZNF500O60304 480 aaPredicted RBP23.06■■□□□ 1.28
SCARF1-202ENST00000348987 FCHSD2O94868 740 aa23.06■■□□□ 1.28
SCARF1-202ENST00000348987 HS1BP3Q53T59 392 aa23.06■■□□□ 1.28
SCARF1-202ENST00000348987 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
SCARF1-202ENST00000348987 ZNF445P59923 1031 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 MCTP1Q6DN14 999 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 CLEC17AQ6ZS10 378 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 RBSNQ9H1K0 784 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 CHD1LQ86WJ1 897 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 LRRC7Q96NW7 1537 aa23.05■■□□□ 1.28
SCARF1-202ENST00000348987 ZSCAN23Q3MJ62 389 aa23.04■■□□□ 1.28
SCARF1-202ENST00000348987 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
SCARF1-202ENST00000348987 ESF1Q9H501 851 aaKnown RBP23.03■■□□□ 1.28
SCARF1-202ENST00000348987 RIMS2Q9UQ26 1411 aa23.03■■□□□ 1.28
SCARF1-202ENST00000348987 ELL2O00472 640 aaPredicted RBP23.03■■□□□ 1.28
SCARF1-202ENST00000348987 TSPYL6Q8N831 410 aa23.03■■□□□ 1.28
SCARF1-202ENST00000348987 ANKRD26Q9UPS8 1709 aa23.03■■□□□ 1.28
SCARF1-202ENST00000348987 BMP2KLQ5H9B9 411 aa23.02■■□□□ 1.28
SCARF1-202ENST00000348987 NME9Q86XW9 330 aa23.02■■□□□ 1.28
SCARF1-202ENST00000348987 PDLIM2Q96JY6 352 aa23.02■■□□□ 1.28
SCARF1-202ENST00000348987 KIF16BQ96L93 1317 aa23.01■■□□□ 1.27
SCARF1-202ENST00000348987 PRIM1P49642 420 aaKnown RBP23■■□□□ 1.27
SCARF1-202ENST00000348987 TBC1D9Q6ZT07 1266 aa23■■□□□ 1.27
SCARF1-202ENST00000348987 METP08581 1390 aa23■■□□□ 1.27
SCARF1-202ENST00000348987 FAM135BQ49AJ0 1406 aa23■■□□□ 1.27
SCARF1-202ENST00000348987 AGLP35573 1532 aa23■■□□□ 1.27
SCARF1-202ENST00000348987 AK9Q5TCS8 1911 aa23■■□□□ 1.27
SCARF1-202ENST00000348987 IPO8O15397 1037 aaKnown RBP22.99■■□□□ 1.27
SCARF1-202ENST00000348987 PRDM10Q9NQV6 1147 aa22.99■■□□□ 1.27
SCARF1-202ENST00000348987 ZKSCAN5Q9Y2L8 839 aa22.99■■□□□ 1.27
SCARF1-202ENST00000348987 KIF13AQ9H1H9 1805 aa22.99■■□□□ 1.27
SCARF1-202ENST00000348987 NUTM2FA1L443 756 aa22.98■■□□□ 1.27
SCARF1-202ENST00000348987 SMAP1Q8IYB5 467 aaPredicted RBP22.98■■□□□ 1.27
SCARF1-202ENST00000348987 C1orf115Q9H7X2 142 aa22.98■■□□□ 1.27
SCARF1-202ENST00000348987 LMBRD1Q9NUN5 540 aa22.98■■□□□ 1.27
SCARF1-202ENST00000348987 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
SCARF1-202ENST00000348987 ANKRD45Q5TZF3 282 aa22.98■■□□□ 1.27
SCARF1-202ENST00000348987 CEBPAP49715 358 aaPredicted RBP22.97■■□□□ 1.27
SCARF1-202ENST00000348987 RRS1Q15050 365 aaKnown RBP22.97■■□□□ 1.27
SCARF1-202ENST00000348987 NFE2L2Q16236 605 aa22.97■■□□□ 1.27
SCARF1-202ENST00000348987 ALDH1L2Q3SY69 923 aa22.97■■□□□ 1.27
SCARF1-202ENST00000348987 VAMP4O75379 141 aa22.96■■□□□ 1.27
SCARF1-202ENST00000348987 A0A0U1RQG5 324 aaPredicted RBP22.95■■□□□ 1.27
SCARF1-202ENST00000348987 IL13P35225 146 aa22.95■■□□□ 1.27
SCARF1-202ENST00000348987 PKP1Q13835 747 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms