RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 CHRNA2Q15822 529 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
NLRP3-202ENST00000348069 EFCAB6Q5THR3 1501 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 RNF17Q9BXT8 1623 aaKnown RBP9.99□□□□□ -0.81
NLRP3-202ENST00000348069 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
NLRP3-202ENST00000348069 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 STRN4Q9NRL3 753 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 DDX19BQ9UMR2 479 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 TMPOP42166 694 aaKnown RBP9.98□□□□□ -0.81
NLRP3-202ENST00000348069 PHACTR3Q96KR7 559 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
NLRP3-202ENST00000348069 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 ABCA6Q8N139 1617 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 ROBO2Q9HCK4 1378 aa9.98□□□□□ -0.81
NLRP3-202ENST00000348069 FOXD4L5Q5VV16 416 aaPredicted RBP9.98□□□□□ -0.81
NLRP3-202ENST00000348069 FOXD4L4Q8WXT5 416 aaPredicted RBP9.98□□□□□ -0.81
NLRP3-202ENST00000348069 RARSP54136 660 aaKnown RBP9.97□□□□□ -0.81
NLRP3-202ENST00000348069 TPM2P07951 284 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 TTC21BQ7Z4L5 1316 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
NLRP3-202ENST00000348069 CEP152O94986 1710 aa9.96□□□□□ -0.81
NLRP3-202ENST00000348069 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
NLRP3-202ENST00000348069 ISY1Q9ULR0 285 aaKnown RBP9.96□□□□□ -0.82
NLRP3-202ENST00000348069 PRR36Q9H6K5 1346 aa9.96□□□□□ -0.82
NLRP3-202ENST00000348069 CHMP4BQ9H444 224 aaKnown RBP9.96□□□□□ -0.82
NLRP3-202ENST00000348069 TBX22Q9Y458 520 aa9.96□□□□□ -0.82
NLRP3-202ENST00000348069 DIP2BQ9P265 1576 aa9.95□□□□□ -0.82
NLRP3-202ENST00000348069 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 MCTP1Q6DN14 999 aa9.95□□□□□ -0.82
NLRP3-202ENST00000348069 PPRC1Q5VV67 1664 aaKnown RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 NUTM2BA6NNL0 878 aaPredicted RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 NUTM2EB1AL46 878 aaPredicted RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 NUTM2AQ8IVF1 878 aaPredicted RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
NLRP3-202ENST00000348069 KRT24Q2M2I5 525 aa9.95□□□□□ -0.82
NLRP3-202ENST00000348069 LRRC59Q96AG4 307 aaKnown RBP9.95□□□□□ -0.82
NLRP3-202ENST00000348069 FRMPD1Q5SYB0 1578 aa9.94□□□□□ -0.82
NLRP3-202ENST00000348069 EVA1CP58658 441 aa9.94□□□□□ -0.82
NLRP3-202ENST00000348069 CAVIN1Q6NZI2 390 aaKnown RBP9.94□□□□□ -0.82
NLRP3-202ENST00000348069 TNPO1Q92973 898 aaKnown RBP9.94□□□□□ -0.82
NLRP3-202ENST00000348069 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
NLRP3-202ENST00000348069 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
NLRP3-202ENST00000348069 RLBP1P12271 317 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 SYTL4Q96C24 671 aaPredicted RBP9.93□□□□□ -0.82
NLRP3-202ENST00000348069 TSPYL4Q9UJ04 414 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 ASXL1Q8IXJ9 1541 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 A2ML1A8K2U0 1454 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 TET3O43151 1660 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 CFAP74Q9C0B2 1584 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 IQGAP1P46940 1657 aa9.93□□□□□ -0.82
NLRP3-202ENST00000348069 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 PAXIP1Q6ZW49 1069 aaPredicted RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 TEFQ10587 303 aa9.92□□□□□ -0.82
NLRP3-202ENST00000348069 FOXD4L6Q3SYB3 417 aaPredicted RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 FOXD4L3Q6VB84 417 aaPredicted RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 MADDQ8WXG6 1647 aa9.92□□□□□ -0.82
NLRP3-202ENST00000348069 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
NLRP3-202ENST00000348069 ZSCAN30Q86W11 494 aa9.92□□□□□ -0.82
NLRP3-202ENST00000348069 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
NLRP3-202ENST00000348069 MAP3K19Q56UN5 1328 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 WDR63Q8IWG1 891 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
NLRP3-202ENST00000348069 SYNMO15061 1565 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 RNF214Q8ND24 703 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 NOB1Q9ULX3 412 aaKnown RBP9.91□□□□□ -0.82
NLRP3-202ENST00000348069 ABCC11Q96J66 1382 aa9.91□□□□□ -0.82
NLRP3-202ENST00000348069 FCHSD2O94868 740 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
NLRP3-202ENST00000348069 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
NLRP3-202ENST00000348069 MPRIPQ6WCQ1 1025 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 PDCL3Q9H2J4 239 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 USP19O94966 1318 aa9.9□□□□□ -0.82
NLRP3-202ENST00000348069 K7ELQ4 463 aaPredicted RBP9.9□□□□□ -0.83
NLRP3-202ENST00000348069 ST18O60284 1047 aa9.9□□□□□ -0.83
NLRP3-202ENST00000348069 AIMP1Q12904 312 aaKnown RBP9.9□□□□□ -0.83
NLRP3-202ENST00000348069 C1orf141Q5JVX7 400 aa9.9□□□□□ -0.83
NLRP3-202ENST00000348069 ATF7IPQ6VMQ6 1270 aa9.9□□□□□ -0.83
NLRP3-202ENST00000348069 SPHKAPQ2M3C7 1700 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 SSH1Q8WYL5 1049 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 ANTXR1Q9H6X2 564 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 TWISTNBQ3B726 338 aaPredicted RBP9.89□□□□□ -0.83
NLRP3-202ENST00000348069 RAPGEF4Q8WZA2 1011 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
NLRP3-202ENST00000348069 SSFA2P28290 1259 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 NUCB2P80303 420 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 NFE2L2Q16236 605 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 TSPYL6Q8N831 410 aa9.89□□□□□ -0.83
NLRP3-202ENST00000348069 STK31Q9BXU1 1019 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms