RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 TSPYL6Q8N831 410 aa18.41■□□□□ 0.54
ARHGEF1-202ENST00000347545 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
ARHGEF1-202ENST00000347545 VAMP4O75379 141 aa18.4■□□□□ 0.54
ARHGEF1-202ENST00000347545 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
ARHGEF1-202ENST00000347545 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
ARHGEF1-202ENST00000347545 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
ARHGEF1-202ENST00000347545 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.54
ARHGEF1-202ENST00000347545 AATKQ6ZMQ8 1374 aa18.39■□□□□ 0.53
ARHGEF1-202ENST00000347545 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
ARHGEF1-202ENST00000347545 NUCB1Q02818 461 aa18.39■□□□□ 0.53
ARHGEF1-202ENST00000347545 MLECQ14165 292 aa18.39■□□□□ 0.53
ARHGEF1-202ENST00000347545 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-202ENST00000347545 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
ARHGEF1-202ENST00000347545 TECPR2O15040 1411 aa18.38■□□□□ 0.53
ARHGEF1-202ENST00000347545 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
ARHGEF1-202ENST00000347545 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
ARHGEF1-202ENST00000347545 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
ARHGEF1-202ENST00000347545 ZBTB7BO15156 539 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF1-202ENST00000347545 NUDT16Q96DE0 195 aaKnown RBP18.36■□□□□ 0.53
ARHGEF1-202ENST00000347545 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
ARHGEF1-202ENST00000347545 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
ARHGEF1-202ENST00000347545 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 KIF13AQ9H1H9 1805 aa18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
ARHGEF1-202ENST00000347545 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
ARHGEF1-202ENST00000347545 C1orf115Q9H7X2 142 aa18.34■□□□□ 0.53
ARHGEF1-202ENST00000347545 ABCC4O15439 1325 aa18.34■□□□□ 0.53
ARHGEF1-202ENST00000347545 PEAK1Q9H792 1746 aa18.33■□□□□ 0.53
ARHGEF1-202ENST00000347545 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.53
ARHGEF1-202ENST00000347545 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
ARHGEF1-202ENST00000347545 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
ARHGEF1-202ENST00000347545 SIRT2Q8IXJ6 389 aa18.33■□□□□ 0.52
ARHGEF1-202ENST00000347545 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
ARHGEF1-202ENST00000347545 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
ARHGEF1-202ENST00000347545 GNAI1P63096 354 aa18.32■□□□□ 0.52
ARHGEF1-202ENST00000347545 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
ARHGEF1-202ENST00000347545 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
ARHGEF1-202ENST00000347545 RGPD1P0DJD0 1748 aa18.31■□□□□ 0.52
ARHGEF1-202ENST00000347545 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
ARHGEF1-202ENST00000347545 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
ARHGEF1-202ENST00000347545 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-202ENST00000347545 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
ARHGEF1-202ENST00000347545 COG3Q96JB2 828 aa18.3■□□□□ 0.52
ARHGEF1-202ENST00000347545 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
ARHGEF1-202ENST00000347545 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
ARHGEF1-202ENST00000347545 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF1-202ENST00000347545 SIRT1Q96EB6 747 aa18.29■□□□□ 0.52
ARHGEF1-202ENST00000347545 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
ARHGEF1-202ENST00000347545 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-202ENST00000347545 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
ARHGEF1-202ENST00000347545 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
ARHGEF1-202ENST00000347545 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF1-202ENST00000347545 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 OVOS2A0A0J9YW53 1432 aa18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 RGS12O14924 1447 aa18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 OVOS2Q6IE36 1432 aa18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
ARHGEF1-202ENST00000347545 FMN2Q9NZ56 1722 aa18.25■□□□□ 0.51
ARHGEF1-202ENST00000347545 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
ARHGEF1-202ENST00000347545 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 KIF2CQ99661 725 aa18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 TNRQ92752 1358 aa18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 TMEM2Q9UHN6 1383 aa18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 DDIT3P35638 169 aa18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 LMOD3Q0VAK6 560 aa18.24■□□□□ 0.51
ARHGEF1-202ENST00000347545 KRT24Q2M2I5 525 aa18.23■□□□□ 0.51
ARHGEF1-202ENST00000347545 MCM4P33991 863 aa18.22■□□□□ 0.51
ARHGEF1-202ENST00000347545 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
ARHGEF1-202ENST00000347545 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
ARHGEF1-202ENST00000347545 ATP10DQ9P241 1426 aa18.21■□□□□ 0.51
ARHGEF1-202ENST00000347545 SULT6B1Q6IMI4 303 aa18.21■□□□□ 0.51
ARHGEF1-202ENST00000347545 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 TBC1D9Q6ZT07 1266 aa18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 SNX21Q969T3 373 aa18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 API5Q9BZZ5 524 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 ACEP12821 1306 aa18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 USP6P35125 1406 aa18.2■□□□□ 0.5
ARHGEF1-202ENST00000347545 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
ARHGEF1-202ENST00000347545 CHMP4BQ9H444 224 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-202ENST00000347545 PTPRUQ92729 1446 aa18.19■□□□□ 0.5
ARHGEF1-202ENST00000347545 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-202ENST00000347545 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
ARHGEF1-202ENST00000347545 MCM10Q7L590 875 aa18.18■□□□□ 0.5
ARHGEF1-202ENST00000347545 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-202ENST00000347545 CHL1O00533 1208 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 LTKP29376 864 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 CRB1P82279 1406 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 NUTM2FA1L443 756 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
ARHGEF1-202ENST00000347545 PLEKHG3A1L390 1219 aa18.16■□□□□ 0.5
ARHGEF1-202ENST00000347545 PLEKHG1Q9ULL1 1385 aa18.16■□□□□ 0.5
ARHGEF1-202ENST00000347545 PLEKHM2Q8IWE5 1019 aa18.15■□□□□ 0.5
ARHGEF1-202ENST00000347545 ESF1Q9H501 851 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms