RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
SKAP2-201ENST00000345317 PRDM11Q9NQV5 511 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 F6X3S4 739 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 MVPQ14764 893 aaKnown RBP10.84□□□□□ -0.67
SKAP2-201ENST00000345317 A2ML1A8K2U0 1454 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 BECN1Q14457 450 aa10.84□□□□□ -0.67
SKAP2-201ENST00000345317 IPO9Q96P70 1041 aaKnown RBP10.84□□□□□ -0.67
SKAP2-201ENST00000345317 PUS7Q96PZ0 661 aaKnown RBP10.84□□□□□ -0.67
SKAP2-201ENST00000345317 PIP4K2BP78356 416 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 SBNO2Q9Y2G9 1366 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 IGHDP01880 384 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 HDGFL1Q5TGJ6 251 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 TOM1L2Q6ZVM7 507 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 C8orf58Q8NAV2 365 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 ARHGAP31Q2M1Z3 1444 aa10.83□□□□□ -0.68
SKAP2-201ENST00000345317 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
SKAP2-201ENST00000345317 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
SKAP2-201ENST00000345317 TRIM6-TRIM34B2RNG4 842 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 ANXA1P04083 346 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
SKAP2-201ENST00000345317 TTC5Q8N0Z6 440 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 VSIG10Q8N0Z9 540 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
SKAP2-201ENST00000345317 EYA1Q99502 592 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
SKAP2-201ENST00000345317 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
SKAP2-201ENST00000345317 PLEKHO1Q53GL0 409 aaPredicted RBP10.81□□□□□ -0.68
SKAP2-201ENST00000345317 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
SKAP2-201ENST00000345317 FRMPD1Q5SYB0 1578 aa10.81□□□□□ -0.68
SKAP2-201ENST00000345317 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
SKAP2-201ENST00000345317 MTHFSDQ2M296 383 aaKnown RBP10.81□□□□□ -0.68
SKAP2-201ENST00000345317 IL13P35225 146 aa10.81□□□□□ -0.68
SKAP2-201ENST00000345317 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
SKAP2-201ENST00000345317 PCDHB15Q9Y5E8 787 aa10.8□□□□□ -0.68
SKAP2-201ENST00000345317 ADGRB3O60242 1522 aa10.8□□□□□ -0.68
SKAP2-201ENST00000345317 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
SKAP2-201ENST00000345317 MYL6BP14649 208 aa10.8□□□□□ -0.68
SKAP2-201ENST00000345317 HMMRO75330 724 aa10.79□□□□□ -0.68
SKAP2-201ENST00000345317 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
SKAP2-201ENST00000345317 KCNH5Q8NCM2 988 aa10.79□□□□□ -0.68
SKAP2-201ENST00000345317 RILPL2Q969X0 211 aa10.79□□□□□ -0.68
SKAP2-201ENST00000345317 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
SKAP2-201ENST00000345317 BTBD11A6QL63 1104 aa10.78□□□□□ -0.68
SKAP2-201ENST00000345317 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
SKAP2-201ENST00000345317 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
SKAP2-201ENST00000345317 CAMSAP1Q5T5Y3 1602 aa10.78□□□□□ -0.68
SKAP2-201ENST00000345317 GCP02774 474 aa10.78□□□□□ -0.68
SKAP2-201ENST00000345317 TATP17735 454 aaPredicted RBP10.78□□□□□ -0.68
SKAP2-201ENST00000345317 ANKRD24Q8TF21 1146 aa10.78□□□□□ -0.68
SKAP2-201ENST00000345317 CLTCQ00610 1675 aaKnown RBP10.77□□□□□ -0.68
SKAP2-201ENST00000345317 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.68
SKAP2-201ENST00000345317 CCDC30Q5VVM6 783 aa10.77□□□□□ -0.68
SKAP2-201ENST00000345317 NPHP1O15259 732 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 C19orf44Q9H6X5 657 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 EDC4Q6P2E9 1401 aaKnown RBP10.77□□□□□ -0.69
SKAP2-201ENST00000345317 GLI2P10070 1586 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 KAT6BQ8WYB5 2073 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 BLMP54132 1417 aaPredicted RBP10.77□□□□□ -0.69
SKAP2-201ENST00000345317 PTCD1O75127 700 aaKnown RBP10.77□□□□□ -0.69
SKAP2-201ENST00000345317 ADAMTS2O95450 1211 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.69
SKAP2-201ENST00000345317 HOXC9P31274 260 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 TTC21AQ8NDW8 1320 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 PLEKHG3A1L390 1219 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 KCNJ4P48050 445 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
SKAP2-201ENST00000345317 RIC3Q7Z5B4 369 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 DNAJC5Q9H3Z4 198 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 SYNMO15061 1565 aa10.76□□□□□ -0.69
SKAP2-201ENST00000345317 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 MROH1Q8NDA8 1641 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 VAMP4O75379 141 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 UBTFL1P0CB47 393 aaPredicted RBP10.75□□□□□ -0.69
SKAP2-201ENST00000345317 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
SKAP2-201ENST00000345317 CCDC27Q2M243 656 aa10.75□□□□□ -0.69
SKAP2-201ENST00000345317 NAP1L5Q96NT1 182 aaPredicted RBP10.75□□□□□ -0.69
SKAP2-201ENST00000345317 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
SKAP2-201ENST00000345317 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
SKAP2-201ENST00000345317 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
SKAP2-201ENST00000345317 HSCBQ8IWL3 235 aa10.74□□□□□ -0.69
SKAP2-201ENST00000345317 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
SKAP2-201ENST00000345317 FLT4P35916 1363 aa10.74□□□□□ -0.69
SKAP2-201ENST00000345317 FAM177BA6PVY3 158 aa10.74□□□□□ -0.69
SKAP2-201ENST00000345317 ZMYM4Q5VZL5 1548 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 CABP4P57796 275 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 PLEKHF1Q96S99 279 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 NEXMIFQ5QGS0 1516 aa10.73□□□□□ -0.69
SKAP2-201ENST00000345317 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
SKAP2-201ENST00000345317 NEXNQ0ZGT2 675 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms