RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 FLT4P35916 1363 aa22.58■■□□□ 1.21
FRMD4A-202ENST00000342409 HMOX1P09601 288 aa22.57■■□□□ 1.2
FRMD4A-202ENST00000342409 TMPOP42166 694 aaKnown RBP22.57■■□□□ 1.2
FRMD4A-202ENST00000342409 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
FRMD4A-202ENST00000342409 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
FRMD4A-202ENST00000342409 CRYBG1Q9Y4K1 1723 aa22.55■■□□□ 1.2
FRMD4A-202ENST00000342409 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
FRMD4A-202ENST00000342409 TRIM35Q9UPQ4 493 aa22.55■■□□□ 1.2
FRMD4A-202ENST00000342409 KIF24Q5T7B8 1368 aa22.55■■□□□ 1.2
FRMD4A-202ENST00000342409 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 PHACTR3Q96KR7 559 aa22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 PXDNQ92626 1479 aa22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 MED1Q15648 1581 aaPredicted RBP22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 E9PSI1 815 aa22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 PNNQ9H307 717 aaKnown RBP22.54■■□□□ 1.2
FRMD4A-202ENST00000342409 WDR63Q8IWG1 891 aa22.53■■□□□ 1.2
FRMD4A-202ENST00000342409 USP19O94966 1318 aa22.52■■□□□ 1.2
FRMD4A-202ENST00000342409 RGPD5Q99666 1765 aa22.52■■□□□ 1.2
FRMD4A-202ENST00000342409 AEBP1Q8IUX7 1158 aa22.52■■□□□ 1.2
FRMD4A-202ENST00000342409 HOXC9P31274 260 aa22.51■■□□□ 1.19
FRMD4A-202ENST00000342409 AMPHP49418 695 aa22.51■■□□□ 1.19
FRMD4A-202ENST00000342409 RTL1A6NKG5 1358 aa22.5■■□□□ 1.19
FRMD4A-202ENST00000342409 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
FRMD4A-202ENST00000342409 RIPK4P57078 832 aa22.48■■□□□ 1.19
FRMD4A-202ENST00000342409 BRINP3Q76B58 766 aa22.48■■□□□ 1.19
FRMD4A-202ENST00000342409 SULT6B1Q6IMI4 303 aa22.48■■□□□ 1.19
FRMD4A-202ENST00000342409 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
FRMD4A-202ENST00000342409 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
FRMD4A-202ENST00000342409 NPHP3Q7Z494 1330 aa22.47■■□□□ 1.19
FRMD4A-202ENST00000342409 KDRP35968 1356 aa22.47■■□□□ 1.19
FRMD4A-202ENST00000342409 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
FRMD4A-202ENST00000342409 IGSF1Q8N6C5 1336 aa22.46■■□□□ 1.19
FRMD4A-202ENST00000342409 NHSL1Q5SYE7 1610 aa22.46■■□□□ 1.19
FRMD4A-202ENST00000342409 GCP02774 474 aa22.45■■□□□ 1.19
FRMD4A-202ENST00000342409 EYA1Q99502 592 aa22.45■■□□□ 1.19
FRMD4A-202ENST00000342409 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
FRMD4A-202ENST00000342409 LTBP4Q8N2S1 1624 aa22.45■■□□□ 1.18
FRMD4A-202ENST00000342409 COL18A1P39060 1754 aa22.45■■□□□ 1.18
FRMD4A-202ENST00000342409 IP6K1Q92551 441 aa22.45■■□□□ 1.18
FRMD4A-202ENST00000342409 LMOD2Q6P5Q4 547 aa22.44■■□□□ 1.18
FRMD4A-202ENST00000342409 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
FRMD4A-202ENST00000342409 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
FRMD4A-202ENST00000342409 ARHGEF25Q86VW2 580 aa22.43■■□□□ 1.18
FRMD4A-202ENST00000342409 IL16Q14005 1332 aa22.41■■□□□ 1.18
FRMD4A-202ENST00000342409 SPATA31A3Q5VYP0 1347 aa22.41■■□□□ 1.18
FRMD4A-202ENST00000342409 CAMTA1Q9Y6Y1 1673 aa22.41■■□□□ 1.18
FRMD4A-202ENST00000342409 ABCA3Q99758 1704 aa22.4■■□□□ 1.18
FRMD4A-202ENST00000342409 NEFMP07197 916 aa22.4■■□□□ 1.18
FRMD4A-202ENST00000342409 PLEKHG5O94827 1062 aa22.39■■□□□ 1.17
FRMD4A-202ENST00000342409 SOS2Q07890 1332 aaPredicted RBP22.38■■□□□ 1.17
FRMD4A-202ENST00000342409 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
FRMD4A-202ENST00000342409 PLIN1O60240 522 aa22.37■■□□□ 1.17
FRMD4A-202ENST00000342409 LTV1Q96GA3 475 aaPredicted RBP22.37■■□□□ 1.17
FRMD4A-202ENST00000342409 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
FRMD4A-202ENST00000342409 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
FRMD4A-202ENST00000342409 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
FRMD4A-202ENST00000342409 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
FRMD4A-202ENST00000342409 NCAPD2Q15021 1401 aa22.35■■□□□ 1.17
FRMD4A-202ENST00000342409 ZBTB7CA1YPR0 619 aa22.34■■□□□ 1.17
FRMD4A-202ENST00000342409 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
FRMD4A-202ENST00000342409 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
FRMD4A-202ENST00000342409 AXIN2Q9Y2T1 843 aa22.34■■□□□ 1.17
FRMD4A-202ENST00000342409 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 BCAR3O75815 825 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 CABLES1Q8TDN4 633 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.17
FRMD4A-202ENST00000342409 LRRC37A3O60309 1634 aa22.32■■□□□ 1.16
FRMD4A-202ENST00000342409 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 ZC3H6P61129 1189 aaKnown RBP22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 USHBP1Q8N6Y0 703 aa22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 ABCC6O95255 1503 aa22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
FRMD4A-202ENST00000342409 EXOSC9Q06265 439 aaKnown RBP22.3■■□□□ 1.16
FRMD4A-202ENST00000342409 LMOD3Q0VAK6 560 aa22.3■■□□□ 1.16
FRMD4A-202ENST00000342409 C20orf194Q5TEA3 1177 aa22.3■■□□□ 1.16
FRMD4A-202ENST00000342409 RARSP54136 660 aaKnown RBP22.29■■□□□ 1.16
FRMD4A-202ENST00000342409 LRRC59Q96AG4 307 aaKnown RBP22.29■■□□□ 1.16
FRMD4A-202ENST00000342409 FAM208AQ9UK61 1670 aaKnown RBP22.29■■□□□ 1.16
FRMD4A-202ENST00000342409 EXOC6Q8TAG9 804 aa22.28■■□□□ 1.16
FRMD4A-202ENST00000342409 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
FRMD4A-202ENST00000342409 IFT57Q9NWB7 429 aa22.27■■□□□ 1.16
FRMD4A-202ENST00000342409 CPDO75976 1380 aa22.26■■□□□ 1.15
FRMD4A-202ENST00000342409 CRB1P82279 1406 aa22.26■■□□□ 1.15
FRMD4A-202ENST00000342409 CALD1Q05682 793 aaKnown RBP22.26■■□□□ 1.15
FRMD4A-202ENST00000342409 AHDC1Q5TGY3 1603 aaPredicted RBP22.25■■□□□ 1.15
FRMD4A-202ENST00000342409 MCM10Q7L590 875 aa22.25■■□□□ 1.15
FRMD4A-202ENST00000342409 CT47B1P0C2W7 299 aaPredicted RBP22.24■■□□□ 1.15
FRMD4A-202ENST00000342409 ERBB3P21860 1342 aa22.24■■□□□ 1.15
FRMD4A-202ENST00000342409 GNAI1P63096 354 aa22.24■■□□□ 1.15
FRMD4A-202ENST00000342409 KIAA0232Q92628 1395 aa22.24■■□□□ 1.15
FRMD4A-202ENST00000342409 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
FRMD4A-202ENST00000342409 GAS2L2Q8NHY3 880 aa22.23■■□□□ 1.15
FRMD4A-202ENST00000342409 CFAP44Q96MT7 982 aa22.23■■□□□ 1.15
FRMD4A-202ENST00000342409 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
FRMD4A-202ENST00000342409 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms