RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
LMX1A-202ENST00000342310 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.07
LMX1A-202ENST00000342310 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
LMX1A-202ENST00000342310 HSP90AA2PQ14568 343 aaPredicted RBP15.46■□□□□ 0.07
LMX1A-202ENST00000342310 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
LMX1A-202ENST00000342310 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
LMX1A-202ENST00000342310 E9PCH4 1651 aa15.46■□□□□ 0.06
LMX1A-202ENST00000342310 G2E3Q7L622 706 aa15.46■□□□□ 0.06
LMX1A-202ENST00000342310 IQGAP3Q86VI3 1631 aa15.45■□□□□ 0.06
LMX1A-202ENST00000342310 SYNMO15061 1565 aa15.45■□□□□ 0.06
LMX1A-202ENST00000342310 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
LMX1A-202ENST00000342310 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
LMX1A-202ENST00000342310 GRPEL1Q9HAV7 217 aa15.45■□□□□ 0.06
LMX1A-202ENST00000342310 GDPD2Q9HCC8 539 aa15.45■□□□□ 0.06
LMX1A-202ENST00000342310 ZCCHC11Q5TAX3 1644 aaKnown RBP15.45■□□□□ 0.06
LMX1A-202ENST00000342310 KCNJ4P48050 445 aa15.44■□□□□ 0.06
LMX1A-202ENST00000342310 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
LMX1A-202ENST00000342310 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
LMX1A-202ENST00000342310 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
LMX1A-202ENST00000342310 TRPM2O94759 1503 aa15.44■□□□□ 0.06
LMX1A-202ENST00000342310 BCL11BQ9C0K0 894 aaPredicted RBP15.44■□□□□ 0.06
LMX1A-202ENST00000342310 A0A0G2JS52 829 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 PKP1Q13835 747 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 GCC1Q96CN9 775 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 NUTM1Q86Y26 1132 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 ZGPATQ8N5A5 531 aaKnown RBP15.43■□□□□ 0.06
LMX1A-202ENST00000342310 RBM27Q9P2N5 1060 aaKnown RBP15.43■□□□□ 0.06
LMX1A-202ENST00000342310 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 SIRT2Q8IXJ6 389 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 ANTXR1Q9H6X2 564 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
LMX1A-202ENST00000342310 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
LMX1A-202ENST00000342310 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
LMX1A-202ENST00000342310 EIF4A2Q14240 407 aaKnown RBP15.42■□□□□ 0.06
LMX1A-202ENST00000342310 CFAP44Q96MT7 982 aa15.42■□□□□ 0.06
LMX1A-202ENST00000342310 ST18O60284 1047 aa15.42■□□□□ 0.06
LMX1A-202ENST00000342310 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
LMX1A-202ENST00000342310 KDM5AP29375 1690 aaKnown RBP15.42■□□□□ 0.06
LMX1A-202ENST00000342310 UNC13BO14795 1591 aa15.41■□□□□ 0.06
LMX1A-202ENST00000342310 HMMRO75330 724 aa15.41■□□□□ 0.06
LMX1A-202ENST00000342310 AAMPQ13685 434 aa15.41■□□□□ 0.06
LMX1A-202ENST00000342310 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
LMX1A-202ENST00000342310 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
LMX1A-202ENST00000342310 SDSP20132 328 aa15.4■□□□□ 0.06
LMX1A-202ENST00000342310 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
LMX1A-202ENST00000342310 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
LMX1A-202ENST00000342310 ACEP12821 1306 aa15.4■□□□□ 0.06
LMX1A-202ENST00000342310 SURF6O75683 361 aaKnown RBP15.4■□□□□ 0.06
LMX1A-202ENST00000342310 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
LMX1A-202ENST00000342310 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
LMX1A-202ENST00000342310 ZNF330Q9Y3S2 320 aaPredicted RBP15.4■□□□□ 0.06
LMX1A-202ENST00000342310 MSNP26038 577 aaKnown RBP15.39■□□□□ 0.05
LMX1A-202ENST00000342310 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
LMX1A-202ENST00000342310 NASPP49321 788 aaPredicted RBP15.39■□□□□ 0.05
LMX1A-202ENST00000342310 MRE11P49959 708 aa15.39■□□□□ 0.05
LMX1A-202ENST00000342310 YTHDC2Q9H6S0 1430 aaKnown RBP15.39■□□□□ 0.05
LMX1A-202ENST00000342310 GSPT1P15170 499 aaKnown RBP15.38■□□□□ 0.05
LMX1A-202ENST00000342310 IL13P35225 146 aa15.38■□□□□ 0.05
LMX1A-202ENST00000342310 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
LMX1A-202ENST00000342310 GAS2L3Q86XJ1 694 aa15.38■□□□□ 0.05
LMX1A-202ENST00000342310 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
LMX1A-202ENST00000342310 PLEKHM2Q8IWE5 1019 aa15.38■□□□□ 0.05
LMX1A-202ENST00000342310 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
LMX1A-202ENST00000342310 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
LMX1A-202ENST00000342310 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
LMX1A-202ENST00000342310 MTHFSDQ2M296 383 aaKnown RBP15.35■□□□□ 0.05
LMX1A-202ENST00000342310 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
LMX1A-202ENST00000342310 LRRFIP2Q9Y608 721 aaKnown RBP15.35■□□□□ 0.05
LMX1A-202ENST00000342310 FOSBP53539 338 aa15.35■□□□□ 0.05
LMX1A-202ENST00000342310 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
LMX1A-202ENST00000342310 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
LMX1A-202ENST00000342310 REC8O95072 547 aa15.35■□□□□ 0.05
LMX1A-202ENST00000342310 HDGFL1Q5TGJ6 251 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 SIL1Q9H173 461 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 SYCE3A1L190 88 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
LMX1A-202ENST00000342310 ESPNB1AK53 854 aa15.33■□□□□ 0.05
LMX1A-202ENST00000342310 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.05
LMX1A-202ENST00000342310 MCCP23508 829 aa15.33■□□□□ 0.05
LMX1A-202ENST00000342310 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
LMX1A-202ENST00000342310 GNAI2P04899 355 aa15.33■□□□□ 0.04
LMX1A-202ENST00000342310 TEFQ10587 303 aa15.33■□□□□ 0.04
LMX1A-202ENST00000342310 TTC22Q5TAA0 569 aa15.33■□□□□ 0.04
LMX1A-202ENST00000342310 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
LMX1A-202ENST00000342310 CPA1P15085 419 aa15.32■□□□□ 0.04
LMX1A-202ENST00000342310 PIP4K2AP48426 406 aaPredicted RBP15.32■□□□□ 0.04
LMX1A-202ENST00000342310 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
LMX1A-202ENST00000342310 AMOTL2Q9Y2J4 779 aa15.32■□□□□ 0.04
LMX1A-202ENST00000342310 NSD2O96028 1365 aa15.32■□□□□ 0.04
LMX1A-202ENST00000342310 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
LMX1A-202ENST00000342310 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
LMX1A-202ENST00000342310 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 POGZQ7Z3K3 1410 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 IL16Q14005 1332 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 RABEP1Q15276 862 aa15.31■□□□□ 0.04
LMX1A-202ENST00000342310 PHAXQ9H814 394 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms