RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 IPO8O15397 1037 aaKnown RBP22.58■■□□□ 1.21
SMPD1-201ENST00000342245 DNAJC2Q99543 621 aaKnown RBP22.58■■□□□ 1.21
SMPD1-201ENST00000342245 CTIFO43310 598 aaKnown RBP22.58■■□□□ 1.21
SMPD1-201ENST00000342245 VGLL3A8MV65 326 aa22.57■■□□□ 1.2
SMPD1-201ENST00000342245 ST18O60284 1047 aa22.56■■□□□ 1.2
SMPD1-201ENST00000342245 FAM193AP78312 1265 aa22.56■■□□□ 1.2
SMPD1-201ENST00000342245 RNF214Q8ND24 703 aa22.56■■□□□ 1.2
SMPD1-201ENST00000342245 IRX5P78411 483 aaPredicted RBP22.55■■□□□ 1.2
SMPD1-201ENST00000342245 RRP7AQ9Y3A4 280 aaKnown RBP22.55■■□□□ 1.2
SMPD1-201ENST00000342245 U2AF2P26368 475 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMPD1-201ENST00000342245 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
SMPD1-201ENST00000342245 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
SMPD1-201ENST00000342245 ADGRB2O60241 1585 aa22.52■■□□□ 1.2
SMPD1-201ENST00000342245 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
SMPD1-201ENST00000342245 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
SMPD1-201ENST00000342245 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 TMEM57Q8N5G2 664 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 TSPYL1Q9H0U9 437 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 NOS1P29475 1434 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 CREBRFQ8IUR6 639 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 CFAP53Q96M91 514 aa22.51■■□□□ 1.19
SMPD1-201ENST00000342245 ZDHHC9Q9Y397 364 aa22.5■■□□□ 1.19
SMPD1-201ENST00000342245 PKP1Q13835 747 aa22.5■■□□□ 1.19
SMPD1-201ENST00000342245 ANKRD45Q5TZF3 282 aa22.5■■□□□ 1.19
SMPD1-201ENST00000342245 TIGD1Q96MW7 591 aa22.5■■□□□ 1.19
SMPD1-201ENST00000342245 RIOK3O14730 519 aaKnown RBP22.49■■□□□ 1.19
SMPD1-201ENST00000342245 SSH1Q8WYL5 1049 aa22.49■■□□□ 1.19
SMPD1-201ENST00000342245 SLFN14P0C7P3 912 aa22.48■■□□□ 1.19
SMPD1-201ENST00000342245 KCNJ4P48050 445 aa22.48■■□□□ 1.19
SMPD1-201ENST00000342245 NOB1Q9ULX3 412 aaKnown RBP22.48■■□□□ 1.19
SMPD1-201ENST00000342245 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 CALCOCO1Q9P1Z2 691 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 IL16Q14005 1332 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 ZBTB22O15209 634 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 MED14O60244 1454 aa22.47■■□□□ 1.19
SMPD1-201ENST00000342245 MORC1Q86VD1 984 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 PLCD3Q8N3E9 789 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 KIAA1524Q8TCG1 905 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 NSFL1CQ9UNZ2 370 aaKnown RBP22.46■■□□□ 1.19
SMPD1-201ENST00000342245 MORC2Q9Y6X9 1032 aaPredicted RBP22.46■■□□□ 1.19
SMPD1-201ENST00000342245 IGSF3O75054 1194 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 ADCY5O95622 1261 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 USP26Q9BXU7 913 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 CTNNA3Q9UI47 895 aa22.46■■□□□ 1.19
SMPD1-201ENST00000342245 DDX41Q9UJV9 622 aaKnown RBP22.46■■□□□ 1.19
SMPD1-201ENST00000342245 TTC12Q9H892 705 aaPredicted RBP22.45■■□□□ 1.18
SMPD1-201ENST00000342245 ERVK-7P63135 1459 aa22.45■■□□□ 1.18
SMPD1-201ENST00000342245 FAM177BA6PVY3 158 aa22.45■■□□□ 1.18
SMPD1-201ENST00000342245 EXOSC9Q06265 439 aaKnown RBP22.45■■□□□ 1.18
SMPD1-201ENST00000342245 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
SMPD1-201ENST00000342245 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
SMPD1-201ENST00000342245 GOLGA6L6A8MZA4 724 aa22.43■■□□□ 1.18
SMPD1-201ENST00000342245 PPRC1Q5VV67 1664 aaKnown RBP22.43■■□□□ 1.18
SMPD1-201ENST00000342245 TULP2O00295 520 aa22.43■■□□□ 1.18
SMPD1-201ENST00000342245 MCM2P49736 904 aa22.43■■□□□ 1.18
SMPD1-201ENST00000342245 USP32Q8NFA0 1604 aa22.42■■□□□ 1.18
SMPD1-201ENST00000342245 CASC1Q6TDU7 716 aa22.42■■□□□ 1.18
SMPD1-201ENST00000342245 ZGPATQ8N5A5 531 aaKnown RBP22.42■■□□□ 1.18
SMPD1-201ENST00000342245 USP25Q9UHP3 1055 aa22.42■■□□□ 1.18
SMPD1-201ENST00000342245 PLCH2O75038 1416 aa22.41■■□□□ 1.18
SMPD1-201ENST00000342245 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
SMPD1-201ENST00000342245 BRD1O95696 1058 aa22.41■■□□□ 1.18
SMPD1-201ENST00000342245 TERF2Q15554 542 aa22.41■■□□□ 1.18
SMPD1-201ENST00000342245 PAXIP1Q6ZW49 1069 aaPredicted RBP22.41■■□□□ 1.18
SMPD1-201ENST00000342245 ZNF428Q96B54 188 aa22.41■■□□□ 1.18
SMPD1-201ENST00000342245 BRPF1P55201 1214 aaPredicted RBP22.4■■□□□ 1.18
SMPD1-201ENST00000342245 ZBTB7CA1YPR0 619 aa22.4■■□□□ 1.18
SMPD1-201ENST00000342245 NCBP1Q09161 790 aaKnown RBP22.4■■□□□ 1.18
SMPD1-201ENST00000342245 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
SMPD1-201ENST00000342245 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
SMPD1-201ENST00000342245 KDM4AO75164 1064 aa22.39■■□□□ 1.18
SMPD1-201ENST00000342245 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.17
SMPD1-201ENST00000342245 ZCCHC11Q5TAX3 1644 aaKnown RBP22.38■■□□□ 1.17
SMPD1-201ENST00000342245 SMTNL1A8MU46 457 aa22.38■■□□□ 1.17
SMPD1-201ENST00000342245 CCDC183Q5T5S1 534 aa22.38■■□□□ 1.17
SMPD1-201ENST00000342245 MYOM2P54296 1465 aa22.38■■□□□ 1.17
SMPD1-201ENST00000342245 SBNO2Q9Y2G9 1366 aa22.38■■□□□ 1.17
SMPD1-201ENST00000342245 KRT222Q8N1A0 295 aa22.38■■□□□ 1.17
SMPD1-201ENST00000342245 C17orf53Q8N3J3 647 aaPredicted RBP22.37■■□□□ 1.17
SMPD1-201ENST00000342245 TEX2Q8IWB9 1127 aa22.37■■□□□ 1.17
SMPD1-201ENST00000342245 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
SMPD1-201ENST00000342245 REC8O95072 547 aa22.36■■□□□ 1.17
SMPD1-201ENST00000342245 INTS4Q96HW7 963 aaKnown RBP22.36■■□□□ 1.17
SMPD1-201ENST00000342245 PAXBP1Q9Y5B6 917 aa22.36■■□□□ 1.17
SMPD1-201ENST00000342245 PIK3R4Q99570 1358 aa22.35■■□□□ 1.17
SMPD1-201ENST00000342245 MYO3AQ8NEV4 1616 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 ZBTB7BO15156 539 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-201ENST00000342245 TTC22Q5TAA0 569 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 ATAD2Q6PL18 1390 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 NSD3Q9BZ95 1437 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 GSPT1P15170 499 aaKnown RBP22.34■■□□□ 1.17
SMPD1-201ENST00000342245 AFAP1Q8N556 730 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 KIF18AQ8NI77 898 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 ARHGAP45Q92619 1136 aa22.34■■□□□ 1.17
SMPD1-201ENST00000342245 CHRM1P11229 460 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-201ENST00000342245 ABCC1P33527 1531 aa22.33■■□□□ 1.17
SMPD1-201ENST00000342245 TMEM87AQ8NBN3 555 aa22.33■■□□□ 1.17
SMPD1-201ENST00000342245 TRPM2O94759 1503 aa22.33■■□□□ 1.16
SMPD1-201ENST00000342245 MX1P20591 662 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms