RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
TMEM248-201ENST00000341567 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
TMEM248-201ENST00000341567 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
TMEM248-201ENST00000341567 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
TMEM248-201ENST00000341567 ESPNB1AK53 854 aa16.43■□□□□ 0.22
TMEM248-201ENST00000341567 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
TMEM248-201ENST00000341567 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
TMEM248-201ENST00000341567 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
TMEM248-201ENST00000341567 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
TMEM248-201ENST00000341567 CDC45O75419 566 aa16.42■□□□□ 0.22
TMEM248-201ENST00000341567 TOM1L2Q6ZVM7 507 aa16.42■□□□□ 0.22
TMEM248-201ENST00000341567 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
TMEM248-201ENST00000341567 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
TMEM248-201ENST00000341567 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
TMEM248-201ENST00000341567 GNAI2P04899 355 aa16.42■□□□□ 0.22
TMEM248-201ENST00000341567 NEK4P51957 841 aa16.42■□□□□ 0.22
TMEM248-201ENST00000341567 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
TMEM248-201ENST00000341567 TSHZ3Q63HK5 1081 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 PHF8Q9UPP1 1060 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 GNAI3P08754 354 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
TMEM248-201ENST00000341567 ABCC10Q5T3U5 1492 aa16.4■□□□□ 0.22
TMEM248-201ENST00000341567 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
TMEM248-201ENST00000341567 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
TMEM248-201ENST00000341567 KDM4AO75164 1064 aa16.4■□□□□ 0.22
TMEM248-201ENST00000341567 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
TMEM248-201ENST00000341567 ZCCHC11Q5TAX3 1644 aaKnown RBP16.39■□□□□ 0.22
TMEM248-201ENST00000341567 PKNOX2Q96KN3 472 aa16.39■□□□□ 0.21
TMEM248-201ENST00000341567 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
TMEM248-201ENST00000341567 CHRNA2Q15822 529 aa16.39■□□□□ 0.21
TMEM248-201ENST00000341567 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
TMEM248-201ENST00000341567 NUCB2P80303 420 aa16.39■□□□□ 0.21
TMEM248-201ENST00000341567 CLASRPQ8N2M8 674 aaKnown RBP16.39■□□□□ 0.21
TMEM248-201ENST00000341567 NUTM2BA6NNL0 878 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-201ENST00000341567 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 NUTM2EB1AL46 878 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-201ENST00000341567 NUTM2AQ8IVF1 878 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-201ENST00000341567 PANK2Q9BZ23 570 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-201ENST00000341567 APPP05067 770 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
TMEM248-201ENST00000341567 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
TMEM248-201ENST00000341567 GOLGA6L6A8MZA4 724 aa16.37■□□□□ 0.21
TMEM248-201ENST00000341567 NRDCO43847 1150 aa16.37■□□□□ 0.21
TMEM248-201ENST00000341567 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
TMEM248-201ENST00000341567 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
TMEM248-201ENST00000341567 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
TMEM248-201ENST00000341567 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
TMEM248-201ENST00000341567 DNAJC2Q99543 621 aaKnown RBP16.37■□□□□ 0.21
TMEM248-201ENST00000341567 PHF14O94880 888 aa16.37■□□□□ 0.21
TMEM248-201ENST00000341567 C8orf34Q49A92 452 aa16.36■□□□□ 0.21
TMEM248-201ENST00000341567 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
TMEM248-201ENST00000341567 ZKSCAN1P17029 563 aaPredicted RBP16.35■□□□□ 0.21
TMEM248-201ENST00000341567 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
TMEM248-201ENST00000341567 SEC24BO95487 1268 aa16.35■□□□□ 0.21
TMEM248-201ENST00000341567 AAMPQ13685 434 aa16.35■□□□□ 0.21
TMEM248-201ENST00000341567 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
TMEM248-201ENST00000341567 CABP4P57796 275 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 CABLES1Q8TDN4 633 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 ZNF592Q92610 1267 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 FSD1Q9BTV5 496 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 SPATA31E1Q6ZUB1 1445 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
TMEM248-201ENST00000341567 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 CCDC27Q2M243 656 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 IFT57Q9NWB7 429 aa16.34■□□□□ 0.21
TMEM248-201ENST00000341567 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.21
TMEM248-201ENST00000341567 ASXL1Q8IXJ9 1541 aa16.33■□□□□ 0.21
TMEM248-201ENST00000341567 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.21
TMEM248-201ENST00000341567 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.21
TMEM248-201ENST00000341567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■■■ 38.1
TMEM248-201ENST00000341567 TNRQ92752 1358 aa16.33■□□□□ 0.2
TMEM248-201ENST00000341567 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
TMEM248-201ENST00000341567 LRRC59Q96AG4 307 aaKnown RBP16.33■□□□□ 0.2
TMEM248-201ENST00000341567 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
TMEM248-201ENST00000341567 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 SHANK2Q9UPX8 1470 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 KCNA6P17658 529 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 H3BQV1 296 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 CCT4P50991 539 aaKnown RBP16.32■□□□□ 0.2
TMEM248-201ENST00000341567 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 RUFY2Q8WXA3 655 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
TMEM248-201ENST00000341567 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
TMEM248-201ENST00000341567 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
TMEM248-201ENST00000341567 HSPA2P54652 639 aa16.31■□□□□ 0.2
TMEM248-201ENST00000341567 K7ELQ4 463 aaPredicted RBP16.31■□□□□ 0.2
TMEM248-201ENST00000341567 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
TMEM248-201ENST00000341567 MEIS3Q99687 375 aa16.3■□□□□ 0.2
TMEM248-201ENST00000341567 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
TMEM248-201ENST00000341567 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
TMEM248-201ENST00000341567 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
TMEM248-201ENST00000341567 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
TMEM248-201ENST00000341567 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms