RNA–Protein interactions for RNA: ENST00000341199.10

SIMC1-202, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIMC1, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-202ENST00000341199 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
SIMC1-202ENST00000341199 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
SIMC1-202ENST00000341199 NCOA3Q9Y6Q9 1424 aa28.39■■■□□ 2.14
SIMC1-202ENST00000341199 C1orf167Q5SNV9 1468 aa28.39■■■□□ 2.14
SIMC1-202ENST00000341199 PSME1Q06323 249 aa28.39■■■□□ 2.13
SIMC1-202ENST00000341199 TMEM94Q12767 1356 aa28.39■■■□□ 2.13
SIMC1-202ENST00000341199 KIF1AQ12756 1690 aa28.38■■■□□ 2.13
SIMC1-202ENST00000341199 C20orf194Q5TEA3 1177 aa28.37■■■□□ 2.13
SIMC1-202ENST00000341199 CCDC136Q96JN2 1154 aa28.37■■■□□ 2.13
SIMC1-202ENST00000341199 CRBNQ96SW2 442 aa28.37■■■□□ 2.13
SIMC1-202ENST00000341199 BCAR3O75815 825 aa28.36■■■□□ 2.13
SIMC1-202ENST00000341199 KIF24Q5T7B8 1368 aa28.36■■■□□ 2.13
SIMC1-202ENST00000341199 STRCQ7RTU9 1775 aa28.36■■■□□ 2.13
SIMC1-202ENST00000341199 FANCIQ9NVI1 1328 aa28.36■■■□□ 2.13
SIMC1-202ENST00000341199 AMPHP49418 695 aa28.35■■■□□ 2.13
SIMC1-202ENST00000341199 DCCP43146 1447 aa28.35■■■□□ 2.13
SIMC1-202ENST00000341199 ARHGEF10O15013 1369 aa28.35■■■□□ 2.13
SIMC1-202ENST00000341199 AEBP1Q8IUX7 1158 aa28.34■■■□□ 2.13
SIMC1-202ENST00000341199 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
SIMC1-202ENST00000341199 NFAT5O94916 1531 aa28.32■■■□□ 2.12
SIMC1-202ENST00000341199 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
SIMC1-202ENST00000341199 TSR2Q969E8 191 aaKnown RBP28.32■■■□□ 2.12
SIMC1-202ENST00000341199 MST1RQ04912 1400 aa28.32■■■□□ 2.12
SIMC1-202ENST00000341199 RARSP54136 660 aaKnown RBP28.31■■■□□ 2.12
SIMC1-202ENST00000341199 DLG5Q8TDM6 1919 aa28.31■■■□□ 2.12
SIMC1-202ENST00000341199 FOXO3O43524 673 aa28.3■■■□□ 2.12
SIMC1-202ENST00000341199 HOXC9P31274 260 aa28.3■■■□□ 2.12
SIMC1-202ENST00000341199 ATF3P18847 181 aa28.29■■■□□ 2.12
SIMC1-202ENST00000341199 RTL1A6NKG5 1358 aa28.29■■■□□ 2.12
SIMC1-202ENST00000341199 CT47B1P0C2W7 299 aaPredicted RBP28.28■■■□□ 2.12
SIMC1-202ENST00000341199 LTN1O94822 1766 aa28.27■■■□□ 2.12
SIMC1-202ENST00000341199 LMOD3Q0VAK6 560 aa28.27■■■□□ 2.12
SIMC1-202ENST00000341199 TSHZ2Q9NRE2 1034 aa28.27■■■□□ 2.12
SIMC1-202ENST00000341199 EXOSC9Q06265 439 aaKnown RBP28.27■■■□□ 2.12
SIMC1-202ENST00000341199 XPCQ01831 940 aaPredicted RBP28.26■■■□□ 2.11
SIMC1-202ENST00000341199 CALD1Q05682 793 aaKnown RBP28.26■■■□□ 2.11
SIMC1-202ENST00000341199 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.11
SIMC1-202ENST00000341199 SLIT3O75094 1523 aa28.25■■■□□ 2.11
SIMC1-202ENST00000341199 KDRP35968 1356 aa28.25■■■□□ 2.11
SIMC1-202ENST00000341199 KRT28Q7Z3Y7 464 aa28.25■■■□□ 2.11
SIMC1-202ENST00000341199 XIRP1Q702N8 1843 aaKnown RBP28.25■■■□□ 2.11
SIMC1-202ENST00000341199 EYA1Q99502 592 aa28.24■■■□□ 2.11
SIMC1-202ENST00000341199 KCNH5Q8NCM2 988 aa28.23■■■□□ 2.11
SIMC1-202ENST00000341199 THUMPD2Q9BTF0 503 aaKnown RBP28.23■■■□□ 2.11
SIMC1-202ENST00000341199 PHRF1Q9P1Y6 1649 aaKnown RBP28.22■■■□□ 2.11
SIMC1-202ENST00000341199 CADPS2Q86UW7 1296 aa28.21■■■□□ 2.11
SIMC1-202ENST00000341199 MSH6P52701 1360 aa28.2■■■□□ 2.11
SIMC1-202ENST00000341199 PDE3AQ14432 1141 aa28.2■■■□□ 2.11
SIMC1-202ENST00000341199 IFT57Q9NWB7 429 aa28.2■■■□□ 2.11
SIMC1-202ENST00000341199 ALS2Q96Q42 1657 aa28.19■■■□□ 2.1
SIMC1-202ENST00000341199 USP19O94966 1318 aa28.19■■■□□ 2.1
SIMC1-202ENST00000341199 ZNF853P0CG23 659 aa28.19■■■□□ 2.1
SIMC1-202ENST00000341199 IP6K1Q92551 441 aa28.19■■■□□ 2.1
SIMC1-202ENST00000341199 CANXP27824 592 aaKnown RBP28.19■■■□□ 2.1
SIMC1-202ENST00000341199 GNAI1P63096 354 aa28.19■■■□□ 2.1
SIMC1-202ENST00000341199 LAS1LQ9Y4W2 734 aaKnown RBP28.17■■■□□ 2.1
SIMC1-202ENST00000341199 FAM83GA6ND36 823 aa28.17■■■□□ 2.1
SIMC1-202ENST00000341199 BCL2L13Q9BXK5 485 aa28.17■■■□□ 2.1
SIMC1-202ENST00000341199 FRAT1Q92837 279 aaPredicted RBP28.15■■■□□ 2.1
SIMC1-202ENST00000341199 GCP02774 474 aa28.14■■■□□ 2.1
SIMC1-202ENST00000341199 DCTN1Q14203 1278 aa28.14■■■□□ 2.09
SIMC1-202ENST00000341199 LTV1Q96GA3 475 aaPredicted RBP28.14■■■□□ 2.09
SIMC1-202ENST00000341199 LMOD2Q6P5Q4 547 aa28.13■■■□□ 2.09
SIMC1-202ENST00000341199 CFAP44Q96MT7 982 aa28.13■■■□□ 2.09
SIMC1-202ENST00000341199 ZNF335Q9H4Z2 1342 aaPredicted RBP28.12■■■□□ 2.09
SIMC1-202ENST00000341199 MTHFSDQ2M296 383 aaKnown RBP28.12■■■□□ 2.09
SIMC1-202ENST00000341199 MBIPQ9NS73 344 aa28.12■■■□□ 2.09
SIMC1-202ENST00000341199 ARHGEF25Q86VW2 580 aa28.11■■■□□ 2.09
SIMC1-202ENST00000341199 PANK1Q8TE04 598 aa28.11■■■□□ 2.09
SIMC1-202ENST00000341199 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
SIMC1-202ENST00000341199 SMC4Q9NTJ3 1288 aa28.11■■■□□ 2.09
SIMC1-202ENST00000341199 MED1Q15648 1581 aaPredicted RBP28.09■■■□□ 2.09
SIMC1-202ENST00000341199 DDX17Q92841 729 aaKnown RBP28.09■■■□□ 2.09
SIMC1-202ENST00000341199 NPHP3Q7Z494 1330 aa28.09■■■□□ 2.09
SIMC1-202ENST00000341199 ZBTB7CA1YPR0 619 aa28.09■■■□□ 2.09
SIMC1-202ENST00000341199 GAS2L2Q8NHY3 880 aa28.08■■■□□ 2.09
SIMC1-202ENST00000341199 TNNQ9UQP3 1299 aa28.08■■■□□ 2.09
SIMC1-202ENST00000341199 PXDNQ92626 1479 aa28.07■■■□□ 2.08
SIMC1-202ENST00000341199 ALDH1L2Q3SY69 923 aa28.07■■■□□ 2.08
SIMC1-202ENST00000341199 MCM10Q7L590 875 aa28.07■■■□□ 2.08
SIMC1-202ENST00000341199 ZKSCAN2Q63HK3 967 aa28.06■■■□□ 2.08
SIMC1-202ENST00000341199 ZNF428Q96B54 188 aa28.06■■■□□ 2.08
SIMC1-202ENST00000341199 COG6Q9Y2V7 657 aa28.06■■■□□ 2.08
SIMC1-202ENST00000341199 CRB1P82279 1406 aa28.06■■■□□ 2.08
SIMC1-202ENST00000341199 PLEKHG5O94827 1062 aa28.05■■■□□ 2.08
SIMC1-202ENST00000341199 RLBP1P12271 317 aa28.05■■■□□ 2.08
SIMC1-202ENST00000341199 TNS3Q68CZ2 1445 aa28.04■■■□□ 2.08
SIMC1-202ENST00000341199 VAMP4O75379 141 aa28.04■■■□□ 2.08
SIMC1-202ENST00000341199 USHBP1Q8N6Y0 703 aa28.04■■■□□ 2.08
SIMC1-202ENST00000341199 KDM2BQ8NHM5 1336 aa28.03■■■□□ 2.08
SIMC1-202ENST00000341199 NBPF6Q5VWK0 638 aa28.03■■■□□ 2.08
SIMC1-202ENST00000341199 TSPYL6Q8N831 410 aa28.03■■■□□ 2.08
SIMC1-202ENST00000341199 NBPF4Q96M43 638 aa28.03■■■□□ 2.08
SIMC1-202ENST00000341199 RGPD2P0DJD1 1756 aa28.02■■■□□ 2.08
SIMC1-202ENST00000341199 CHL1O00533 1208 aa28.02■■■□□ 2.08
SIMC1-202ENST00000341199 LRRC37A3O60309 1634 aa28.01■■■□□ 2.07
SIMC1-202ENST00000341199 HTATSF1O43719 755 aaKnown RBP28.01■■■□□ 2.07
SIMC1-202ENST00000341199 MS4A1P11836 297 aa28.01■■■□□ 2.07
SIMC1-202ENST00000341199 BRINP3Q76B58 766 aa28.01■■■□□ 2.07
SIMC1-202ENST00000341199 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms