RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
FCF1-201ENST00000341162 CABP1Q9NZU7 370 aa9.16□□□□□ -0.94
FCF1-201ENST00000341162 POLKQ9UBT6 870 aa9.16□□□□□ -0.94
FCF1-201ENST00000341162 KDM3BQ7LBC6 1761 aa9.16□□□□□ -0.94
FCF1-201ENST00000341162 IPO8O15397 1037 aaKnown RBP9.15□□□□□ -0.94
FCF1-201ENST00000341162 NEFMP07197 916 aa9.15□□□□□ -0.94
FCF1-201ENST00000341162 COG3Q96JB2 828 aa9.15□□□□□ -0.95
FCF1-201ENST00000341162 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 ALS2Q96Q42 1657 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 GNAI1P63096 354 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 PDE4AP27815 886 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 PARP4Q9UKK3 1724 aaKnown RBP9.14□□□□□ -0.95
FCF1-201ENST00000341162 CRYBG1Q9Y4K1 1723 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 FLT4P35916 1363 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
FCF1-201ENST00000341162 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
FCF1-201ENST00000341162 MVPQ14764 893 aaKnown RBP9.14□□□□□ -0.95
FCF1-201ENST00000341162 IL27Q8NEV9 243 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
FCF1-201ENST00000341162 DDX19BQ9UMR2 479 aa9.14□□□□□ -0.95
FCF1-201ENST00000341162 CCDC146Q8IYE0 955 aa9.13□□□□□ -0.95
FCF1-201ENST00000341162 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
FCF1-201ENST00000341162 SIPA1L3O60292 1781 aaPredicted RBP9.13□□□□□ -0.95
FCF1-201ENST00000341162 PRR36Q9H6K5 1346 aa9.13□□□□□ -0.95
FCF1-201ENST00000341162 NOP58Q9Y2X3 529 aaKnown RBP9.12□□□□□ -0.95
FCF1-201ENST00000341162 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
FCF1-201ENST00000341162 STK26Q9P289 416 aa9.12□□□□□ -0.95
FCF1-201ENST00000341162 CHMP4AQ9BY43 222 aa9.11□□□□□ -0.95
FCF1-201ENST00000341162 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
FCF1-201ENST00000341162 GGNBP2Q9H3C7 697 aa9.11□□□□□ -0.95
FCF1-201ENST00000341162 ABCC4O15439 1325 aa9.1□□□□□ -0.95
FCF1-201ENST00000341162 DZIP1LQ8IYY4 767 aaKnown RBP9.1□□□□□ -0.95
FCF1-201ENST00000341162 TUBGCP6Q96RT7 1819 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 ATF7IPQ6VMQ6 1270 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 CRB1P82279 1406 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 IGSF1Q8N6C5 1336 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 C20orf194Q5TEA3 1177 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 DMRT2Q9Y5R5 561 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
FCF1-201ENST00000341162 MSH5O43196 834 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 LTKP29376 864 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 TXNDC2Q86VQ3 553 aa9.09□□□□□ -0.95
FCF1-201ENST00000341162 WAPLQ7Z5K2 1190 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 PTPRCP08575 1304 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 RIPK4P57078 832 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 ACEP12821 1306 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 C8orf34Q49A92 452 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 SMC5Q8IY18 1101 aa9.08□□□□□ -0.96
FCF1-201ENST00000341162 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
FCF1-201ENST00000341162 PPM1GO15355 546 aaPredicted RBP9.07□□□□□ -0.96
FCF1-201ENST00000341162 BCAR3O75815 825 aa9.07□□□□□ -0.96
FCF1-201ENST00000341162 MSH6P52701 1360 aa9.06□□□□□ -0.96
FCF1-201ENST00000341162 CANXP27824 592 aaKnown RBP9.06□□□□□ -0.96
FCF1-201ENST00000341162 NUTM2DQ5VT03 806 aaPredicted RBP9.06□□□□□ -0.96
FCF1-201ENST00000341162 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
FCF1-201ENST00000341162 PLIN1O60240 522 aa9.06□□□□□ -0.96
FCF1-201ENST00000341162 PRKAR2BP31323 418 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 ERICH6Q7L0X2 663 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
FCF1-201ENST00000341162 ZBTB40Q9NUA8 1239 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 AMOTL2Q9Y2J4 779 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 RGS12O14924 1447 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 GAS2L2Q8NHY3 880 aa9.05□□□□□ -0.96
FCF1-201ENST00000341162 MRC1P22897 1456 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 COL18A1P39060 1754 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 EXOSC9Q06265 439 aaKnown RBP9.04□□□□□ -0.96
FCF1-201ENST00000341162 NME9Q86XW9 330 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 ZBTB47Q9UFB7 747 aaPredicted RBP9.04□□□□□ -0.96
FCF1-201ENST00000341162 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 CHL1O00533 1208 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 HOXB7P09629 217 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 U2SURPO15042 1029 aaKnown RBP9.04□□□□□ -0.96
FCF1-201ENST00000341162 CNGB1Q14028 1251 aaPredicted RBP9.04□□□□□ -0.96
FCF1-201ENST00000341162 SMC4Q9NTJ3 1288 aa9.04□□□□□ -0.96
FCF1-201ENST00000341162 USP19O94966 1318 aa9.03□□□□□ -0.96
FCF1-201ENST00000341162 VAMP4O75379 141 aa9.03□□□□□ -0.96
FCF1-201ENST00000341162 TRIM27P14373 513 aa9.03□□□□□ -0.96
FCF1-201ENST00000341162 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
FCF1-201ENST00000341162 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
FCF1-201ENST00000341162 EIF4A2Q14240 407 aaKnown RBP9.03□□□□□ -0.96
FCF1-201ENST00000341162 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
FCF1-201ENST00000341162 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
FCF1-201ENST00000341162 SSH1Q8WYL5 1049 aa9.03□□□□□ -0.96
FCF1-201ENST00000341162 SCN11AQ9UI33 1791 aa9.02□□□□□ -0.97
FCF1-201ENST00000341162 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
FCF1-201ENST00000341162 PAPPAQ13219 1627 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 CEMIPQ8WUJ3 1361 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 SAFB2Q14151 953 aaKnown RBP eCLIP9.01□□□□□ -0.97
FCF1-201ENST00000341162 EPB41L2O43491 1005 aaKnown RBP9.01□□□□□ -0.97
FCF1-201ENST00000341162 IGHDP01880 384 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 KCNA6P17658 529 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 NUCB1Q02818 461 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 MLECQ14165 292 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 EMILIN1Q9Y6C2 1016 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 ABCA3Q99758 1704 aa9.01□□□□□ -0.97
FCF1-201ENST00000341162 ATP10DQ9P241 1426 aa9□□□□□ -0.97
FCF1-201ENST00000341162 MAP3K5Q99683 1374 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 419.9 ms